BLASTX nr result

ID: Coptis24_contig00029459 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029459
         (822 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267701.2| PREDICTED: uncharacterized protein LOC100257...   188   1e-45
emb|CBI34121.3| unnamed protein product [Vitis vinifera]              188   1e-45
emb|CBI17252.3| unnamed protein product [Vitis vinifera]              164   3e-38
ref|XP_002323361.1| predicted protein [Populus trichocarpa] gi|2...   159   5e-37
ref|XP_002524103.1| conserved hypothetical protein [Ricinus comm...   142   7e-32

>ref|XP_002267701.2| PREDICTED: uncharacterized protein LOC100257121 [Vitis vinifera]
          Length = 770

 Score =  188 bits (477), Expect = 1e-45
 Identities = 117/259 (45%), Positives = 148/259 (57%), Gaps = 10/259 (3%)
 Frame = +1

Query: 76  KRPDTSKCPRYIDTRVDEVFPVRKPNVRSTMLYIQEKAKN----------KLVSVSSILD 225
           K+ D  K PRYIDTR+DEVFP RK   R  ML  +E AK           K + VSS   
Sbjct: 205 KKQDVFKVPRYIDTRMDEVFPARKSRFR--MLPGKENAKEDISTEPAGCVKNMRVSSNSV 262

Query: 226 TKSQPQLACSGTSPSVDNSAKSGTAQTFSMTEKCSKKTFPNVSDISLGFEKXXXXXXXXX 405
            KS PQL+C   + +    +K GT Q     EKCS+ TF +V+++SLG E+         
Sbjct: 263 VKSHPQLSCPENTVASAAVSKDGTRQDCEYAEKCSQSTFRSVAELSLGSERISEIVSVDM 322

Query: 406 XXNMEALKTLGAREPPAVSHLPSDPAKIYGDRSSSYLGTFSTESHIPGRKTPLDLTLKTT 585
                ALK L AREPPA S L +D ++ +G+ +S   G F +E HIPG+K PLD TLKT 
Sbjct: 323 D---RALKGLVAREPPAFSGLAADSSEKFGNLTSISSGNFCSEFHIPGQKAPLDFTLKTN 379

Query: 586 MKLVSSSSVKWCHRLINSSISYGINHSTSRFSCYGNQKPSLLKGNDFAAVALFSKSLHSW 765
           M++VSSSSV W HRL  S+   G    T +F C  +Q  S   G    A     ++LHSW
Sbjct: 380 MQIVSSSSVNWFHRLNMSATYNGTTLFTPQFGCSKDQNISCSSGLTSTAQIFNYRALHSW 439

Query: 766 TYPQSSLPPSVISALRMSA 822
            +PQSSLPPSVISAL +SA
Sbjct: 440 VHPQSSLPPSVISALTLSA 458


>emb|CBI34121.3| unnamed protein product [Vitis vinifera]
          Length = 632

 Score =  188 bits (477), Expect = 1e-45
 Identities = 117/259 (45%), Positives = 148/259 (57%), Gaps = 10/259 (3%)
 Frame = +1

Query: 76  KRPDTSKCPRYIDTRVDEVFPVRKPNVRSTMLYIQEKAKN----------KLVSVSSILD 225
           K+ D  K PRYIDTR+DEVFP RK   R  ML  +E AK           K + VSS   
Sbjct: 68  KKQDVFKVPRYIDTRMDEVFPARKSRFR--MLPGKENAKEDISTEPAGCVKNMRVSSNSV 125

Query: 226 TKSQPQLACSGTSPSVDNSAKSGTAQTFSMTEKCSKKTFPNVSDISLGFEKXXXXXXXXX 405
            KS PQL+C   + +    +K GT Q     EKCS+ TF +V+++SLG E+         
Sbjct: 126 VKSHPQLSCPENTVASAAVSKDGTRQDCEYAEKCSQSTFRSVAELSLGSERISEIVSVDM 185

Query: 406 XXNMEALKTLGAREPPAVSHLPSDPAKIYGDRSSSYLGTFSTESHIPGRKTPLDLTLKTT 585
                ALK L AREPPA S L +D ++ +G+ +S   G F +E HIPG+K PLD TLKT 
Sbjct: 186 D---RALKGLVAREPPAFSGLAADSSEKFGNLTSISSGNFCSEFHIPGQKAPLDFTLKTN 242

Query: 586 MKLVSSSSVKWCHRLINSSISYGINHSTSRFSCYGNQKPSLLKGNDFAAVALFSKSLHSW 765
           M++VSSSSV W HRL  S+   G    T +F C  +Q  S   G    A     ++LHSW
Sbjct: 243 MQIVSSSSVNWFHRLNMSATYNGTTLFTPQFGCSKDQNISCSSGLTSTAQIFNYRALHSW 302

Query: 766 TYPQSSLPPSVISALRMSA 822
            +PQSSLPPSVISAL +SA
Sbjct: 303 VHPQSSLPPSVISALTLSA 321


>emb|CBI17252.3| unnamed protein product [Vitis vinifera]
          Length = 424

 Score =  164 bits (414), Expect = 3e-38
 Identities = 108/261 (41%), Positives = 148/261 (56%), Gaps = 12/261 (4%)
 Frame = +1

Query: 76  KRPDTSKCPRYIDTRVDEVFPVRKPNVRSTMLYIQEKAK------------NKLVSVSSI 219
           K+ D  + PR IDTR+D VFP +K   R  ML  +E AK            N  VS++S+
Sbjct: 82  KKQDAFEVPRCIDTRMDGVFPAKKSRFR--MLSGKENAKEDISAAPAGCLKNICVSLNSV 139

Query: 220 LDTKSQPQLACSGTSPSVDNSAKSGTAQTFSMTEKCSKKTFPNVSDISLGFEKXXXXXXX 399
           +  KS PQL+C   + +    +K GT Q     EKCS+ TF +V+++SLG E+       
Sbjct: 140 V--KSHPQLSCPENTVASAAVSKDGTRQDCEYAEKCSQSTFRSVAELSLGSERISEMAVV 197

Query: 400 XXXXNMEALKTLGAREPPAVSHLPSDPAKIYGDRSSSYLGTFSTESHIPGRKTPLDLTLK 579
                 +ALK L A EP A S L +D ++ + + +S   G F +E HIPG+K PLD TLK
Sbjct: 198 DMD---KALKGLVACEPRAFSGLAADSSEKFDNFTSISSGHFCSEFHIPGQKAPLDFTLK 254

Query: 580 TTMKLVSSSSVKWCHRLINSSISYGINHSTSRFSCYGNQKPSLLKGNDFAAVALFSKSLH 759
           T M++VSSSSV W H ++N S +Y    +T +F C  +Q  S   G    A     ++LH
Sbjct: 255 TNMQIVSSSSVNWFH-ILNMSATYN-GTTTPQFGCSKDQNISCSSGITSTAQIFNYRALH 312

Query: 760 SWTYPQSSLPPSVISALRMSA 822
           SW +PQSSLPPSVISA  +SA
Sbjct: 313 SWVHPQSSLPPSVISAWNLSA 333


>ref|XP_002323361.1| predicted protein [Populus trichocarpa] gi|222867991|gb|EEF05122.1|
           predicted protein [Populus trichocarpa]
          Length = 630

 Score =  159 bits (403), Expect = 5e-37
 Identities = 102/259 (39%), Positives = 143/259 (55%), Gaps = 10/259 (3%)
 Frame = +1

Query: 76  KRPDTSKCPRYIDTRVDEVFPVRKPNVRSTMLYIQEKAKN----------KLVSVSSILD 225
           ++PD S+ PRYI+TR+DEV+PV+K  +R  ML +++ AK           K +SV S L 
Sbjct: 74  RKPDASRTPRYINTRMDEVYPVKKSRLR--MLSVKDSAKENTSTEQTNSLKNISVLSTLA 131

Query: 226 TKSQPQLACSGTSPSVDNSAKSGTAQTFSMTEKCSKKTFPNVSDISLGFEKXXXXXXXXX 405
            K Q QL+C+  S + D   K    Q     + CS+  F +V+++S   E+         
Sbjct: 132 AKRQ-QLSCTENSVASDEVLKDDVVQPHQTIKNCSQSIFHSVTELSSSGERSSGLAFVEM 190

Query: 406 XXNMEALKTLGAREPPAVSHLPSDPAKIYGDRSSSYLGTFSTESHIPGRKTPLDLTLKTT 585
               +ALK L A EPP  S L +D +    +++ ++ G F +E HI G+K PLD TLKT 
Sbjct: 191 D---KALKGLVAHEPPDTSGLNADSS----EKAGNHGGNFCSECHIAGKKAPLDFTLKTR 243

Query: 586 MKLVSSSSVKWCHRLINSSISYGINHSTSRFSCYGNQKPSLLKGNDFAAVALFSKSLHSW 765
           M++ SS SV W HR I SS   G+    S+F   G+ K S   G    +  L SK+LHSW
Sbjct: 244 MRVASSCSVNWIHRSIMSSTYNGMPQLASQF---GDSKDSSSSGQAMTSQILSSKALHSW 300

Query: 766 TYPQSSLPPSVISALRMSA 822
            YPQS+LP +VIS L  SA
Sbjct: 301 VYPQSTLPSAVISVLTSSA 319


>ref|XP_002524103.1| conserved hypothetical protein [Ricinus communis]
           gi|223536671|gb|EEF38313.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 644

 Score =  142 bits (359), Expect = 7e-32
 Identities = 95/259 (36%), Positives = 134/259 (51%), Gaps = 10/259 (3%)
 Frame = +1

Query: 76  KRPDTSKCPRYIDTRVDEVFPVRKPNVRSTMLYIQEKAKNKL----------VSVSSILD 225
           K+PD  + PRYIDTR+DE++P +K  +R  +L  ++ AK  +          +++ S L 
Sbjct: 75  KKPDLPRNPRYIDTRMDELYPAKKSRLR--VLSAKDNAKENISTEQTVSLKNIAILSNLA 132

Query: 226 TKSQPQLACSGTSPSVDNSAKSGTAQTFSMTEKCSKKTFPNVSDISLGFEKXXXXXXXXX 405
            K +   + +    SVD   + G  Q     E+CS+  F +V+++S   EK         
Sbjct: 133 AKRRISRSENPALASVD--PEEGKTQACQTIERCSQSIFRSVTELSSNGEKSSGSTIVDM 190

Query: 406 XXNMEALKTLGAREPPAVSHLPSDPAKIYGDRSSSYLGTFSTESHIPGRKTPLDLTLKTT 585
               +ALK L A E    S  P+D +K +G+ +S + G F +E  +PG K PLD TLKT 
Sbjct: 191 D---KALKGLVAHELQTDSASPADFSKNFGNHASFHSGNFVSECLVPGSKAPLDFTLKTK 247

Query: 586 MKLVSSSSVKWCHRLINSSISYGINHSTSRFSCYGNQKPSLLKGNDFAAVALFSKSLHSW 765
           M++ SS SV W HR I  S    I   TS+F C  +   S   G    +  L SK+LHSW
Sbjct: 248 MRVASSCSVNWIHRSILGSAYNAIPQLTSQFGCSEDSSGS---GQALTSQILSSKALHSW 304

Query: 766 TYPQSSLPPSVISALRMSA 822
            YPQ  LPPSVIS L   A
Sbjct: 305 VYPQCILPPSVISVLSSQA 323


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