BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029454
         (500 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga...   114   8e-24
gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thali...   113   1e-23
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga...   112   3e-23
gb|AAC19278.1| T14P8.10 [Arabidopsis thaliana] gi|7269009|emb|CA...   111   5e-23
gb|AAC95175.1| putative non-LTR retroelement reverse transcripta...   111   7e-23

>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1114

 Score =  114 bits (285), Expect = 8e-24
 Identities = 58/161 (36%), Positives = 89/161 (55%)
 Frame = +2

Query: 14   TSLNINSDKSSLLVGCMSHAAGLDLATALGIPLISPPLIYLGLPLTSSRLGIRDCLPLVE 193
            + L  + +KS +  G + H     LA  + +P+ S P  YLG+PL S +L    C PL++
Sbjct: 720  SGLQASIEKSCIYFGGVCHEEAEQLADRIQMPIGSLPFRYLGVPLASKKLNFSQCKPLID 779

Query: 194  RLTSRISNWKNFSLSRAGRLELIQSVLSSFQVYWSKTFVLPKKVLDNVSKICNHFLWSGP 373
            ++T+R   W    LS AGRL+L++++L S Q YW + F LPKK++  V   C  FLW+G 
Sbjct: 780  KITTRAQGWVAHLLSYAGRLQLVKTILYSMQNYWGQIFPLPKKLIKAVETTCRKFLWTGT 839

Query: 374  NMTRKMHHASHEVLRYSKEQGGLGMIDARTWNKAAYCGLIF 496
              T      + + L+  K  GGL + +   WNKAA   L++
Sbjct: 840  VDTSYKAPVAWDFLQQPKSTGGLNVTNMVLWNKAAILKLLW 880


>gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thaliana]
            gi|20197043|gb|AAM14892.1| putative reverse transcriptase
            [Arabidopsis thaliana]
          Length = 1412

 Score =  113 bits (283), Expect = 1e-23
 Identities = 65/164 (39%), Positives = 95/164 (57%), Gaps = 1/164 (0%)
 Frame = +2

Query: 11   FTSLNINSDKSSLLVGCMSHAAGLDLATALGIPLISPPLIYLGLPLTSSRLGIRDCLPLV 190
            F+ LNI+ +KS+L +  +S      +         S P+ YLGLPL + R+ + DCLPL+
Sbjct: 986  FSGLNISLEKSTLFMASISSETCASILARFPFDSGSLPVRYLGLPLMTKRMTLADCLPLL 1045

Query: 191  ERLTSRISNWKNFSLSRAGRLELIQSVLSSFQVYWSKTFVLPKKVLDNVSKICNHFLWSG 370
            E++ SRIS+WKN  LS AGRL+L+ SV+SS   +W   F LP+  +  + +I   FLWSG
Sbjct: 1046 EKIRSRISSWKNRFLSYAGRLQLLNSVISSLTKFWISAFRLPRACIREIEQISAAFLWSG 1105

Query: 371  PNMT-RKMHHASHEVLRYSKEQGGLGMIDARTWNKAAYCGLIFR 499
             ++   K   A H+V +  K +GGLG+      NK     LI+R
Sbjct: 1106 TDLNPHKAKVAWHDVCK-PKSEGGLGLRSLVDANKICCFKLIWR 1148


>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1110

 Score =  112 bits (280), Expect = 3e-23
 Identities = 60/161 (37%), Positives = 90/161 (55%)
 Frame = +2

Query: 14   TSLNINSDKSSLLVGCMSHAAGLDLATALGIPLISPPLIYLGLPLTSSRLGIRDCLPLVE 193
            + L  + +KS++    +      +LA  + + L   P  YLG+PLTS +L    C PLVE
Sbjct: 717  SGLAASHEKSNIYFCGVDDETARELADYVHMQLGELPFRYLGVPLTSKKLTYAQCKPLVE 776

Query: 194  RLTSRISNWKNFSLSRAGRLELIQSVLSSFQVYWSKTFVLPKKVLDNVSKICNHFLWSGP 373
             +T+R   W    LS AGRL+LI+S+LSS Q YW+  F L KKV+  V K+C  FLW+G 
Sbjct: 777  MITNRAQTWMAKLLSYAGRLQLIKSILSSMQNYWAHIFPLSKKVIQAVEKVCRKFLWTGK 836

Query: 374  NMTRKMHHASHEVLRYSKEQGGLGMIDARTWNKAAYCGLIF 496
                K    +   ++  K +GG  +I+ + WN+AA   L++
Sbjct: 837  TEETKKAPVAWATIQRPKSRGGWNVINMKYWNRAAMLKLLW 877


>gb|AAC19278.1| T14P8.10 [Arabidopsis thaliana] gi|7269009|emb|CAB80742.1|
           AT4g02490 [Arabidopsis thaliana]
          Length = 657

 Score =  111 bits (278), Expect = 5e-23
 Identities = 60/161 (37%), Positives = 95/161 (59%)
 Frame = +2

Query: 14  TSLNINSDKSSLLVGCMSHAAGLDLATALGIPLISPPLIYLGLPLTSSRLGIRDCLPLVE 193
           + L IN  K++LL+   +      +A +LG+   S P+ YLG+PL S ++   D  PLV+
Sbjct: 273 SGLGINLQKTALLLDGGNFERNRIMAASLGVSQGSLPVRYLGVPLMSQKMKKHDYQPLVD 332

Query: 194 RLTSRISNWKNFSLSRAGRLELIQSVLSSFQVYWSKTFVLPKKVLDNVSKICNHFLWSGP 373
           R+ SR ++W    LS AGRL+L++SV+ S   +W+  F+LP + L  + ++CN FLWSG 
Sbjct: 333 RINSRFTSWTARHLSFAGRLQLLKSVIYSTINFWASIFILPNQCLHKLEQMCNAFLWSGA 392

Query: 374 NMTRKMHHASHEVLRYSKEQGGLGMIDARTWNKAAYCGLIF 496
             + +    S +++  SKE GGLG+    +WNK     LI+
Sbjct: 393 PNSAREAKISWDIVCSSKESGGLGLKRLSSWNKVLALKLIW 433


>gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1352

 Score =  111 bits (277), Expect = 7e-23
 Identities = 66/161 (40%), Positives = 98/161 (60%), Gaps = 1/161 (0%)
 Frame = +2

Query: 20   LNINSDKSSLLVGCMSHAAGLDLATALGIPLISPPLIYLGLPLTSSRLGIRDCLPLVERL 199
            L I+ +KS++ +  +S  A   +       L + P+ YLGLPL + R+   D LPLVE++
Sbjct: 881  LKISLEKSTIFMAGISPNAKTSILQQFPFELGTLPVKYLGLPLLTKRMTQSDYLPLVEKI 940

Query: 200  TSRISNWKNFSLSRAGRLELIQSVLSSFQVYWSKTFVLPKKVLDNVSKICNHFLWSGPNM 379
             +RI++W N  LS AGRL+LI+SVLSS   +W   F LPK  L  + K+ + FLWSGP++
Sbjct: 941  RARITSWTNRFLSFAGRLQLIKSVLSSITNFWLSVFRLPKACLQEIEKMFSAFLWSGPDL 1000

Query: 380  -TRKMHHASHEVLRYSKEQGGLGMIDARTWNKAAYCGLIFR 499
             T+K   A  EV +  KE+GGLG+   +  N+ +   LI+R
Sbjct: 1001 NTKKAKIAWSEVCKL-KEEGGLGLKPLKEANEVSLLKLIWR 1040