BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029444
         (284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003566324.1| PREDICTED: putative ribonuclease H protein A...    57   1e-06
gb|EAZ08213.1| hypothetical protein OsI_30472 [Oryza sativa Indi...    57   1e-06
gb|EEE69227.1| hypothetical protein OsJ_28461 [Oryza sativa Japo...    56   3e-06
gb|AAS55787.1| hypothetical protein [Oryza sativa Japonica Group...    55   6e-06
ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [S...    55   8e-06

>ref|XP_003566324.1| PREDICTED: putative ribonuclease H protein At1g65750-like
           [Brachypodium distachyon]
          Length = 776

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 30/84 (35%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
 Frame = -3

Query: 246 VNQKKNGGLGIRE--LDNYAHLSKIIWHIISMPHSFLSQQLKDKYFHSHLAVLHSIIVHN 73
           +  K  GG+G R+  L N A L+K  W +I  P SF ++ +K KYF  H  +L + ++ +
Sbjct: 41  IQPKSKGGMGFRDMALFNQALLAKQAWRLIDKPDSFCARLIKAKYF-PHGNLLDTAVIQS 99

Query: 72  SSWFWYGMYKVLSIIKDNSIWQVG 1
           SS  W G+   L ++K   IW++G
Sbjct: 100 SSPVWQGIKHGLDLLKKGYIWRIG 123


>gb|EAZ08213.1| hypothetical protein OsI_30472 [Oryza sativa Indica Group]
          Length = 398

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 30/81 (37%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
 Frame = -3

Query: 237 KKNGGLGIRELD--NYAHLSKIIWHIISMPHSFLSQQLKDKYFHSHLAVLHSIIVHNSSW 64
           K+NGGLG R+L   N A L++  W +++ P +  ++ LK KY+  H  VLHS      S+
Sbjct: 44  KENGGLGFRDLHLFNIAMLARQAWRLLTNPGTLCARVLKAKYY-PHTDVLHSSAKDGISY 102

Query: 63  FWYGMYKVLSIIKDNSIWQVG 1
            W  + K + ++K+  IW+VG
Sbjct: 103 SWRSILKGVELLKEGLIWRVG 123


>gb|EEE69227.1| hypothetical protein OsJ_28461 [Oryza sativa Japonica Group]
          Length = 314

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 30/81 (37%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
 Frame = -3

Query: 237 KKNGGLGIRELD--NYAHLSKIIWHIISMPHSFLSQQLKDKYFHSHLAVLHSIIVHNSSW 64
           K+NGGLG R+L   N A L++  W +++ P +  ++ LK KY+  H  VLHS      S+
Sbjct: 3   KENGGLGFRDLHLFNIAMLARQAWRLLTNPGTLCARVLKAKYY-PHTDVLHSSAKDVISY 61

Query: 63  FWYGMYKVLSIIKDNSIWQVG 1
            W  + K + ++K+  IW+VG
Sbjct: 62  SWRSILKGVELLKEGLIWRVG 82


>gb|AAS55787.1| hypothetical protein [Oryza sativa Japonica Group]
            gi|54291856|gb|AAV32224.1| hypothetical protein [Oryza
            sativa Japonica Group]
          Length = 1936

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
 Frame = -3

Query: 237  KKNGGLGIRE--LDNYAHLSKIIWHIISMPHSFLSQQLKDKYFHSHLAVLHSIIVHNSSW 64
            K NGGLG R+  L N A L++  W +I  P+S  +Q LK KYF  H ++  +    N+S 
Sbjct: 1488 KINGGLGFRDYKLFNQALLTRQAWRLIEFPNSLCAQVLKAKYF-PHGSLTDTTFSANASP 1546

Query: 63   FWYGMYKVLSIIKDNSIWQVG 1
             W+G+   L ++K   IW++G
Sbjct: 1547 TWHGIEYGLDLLKKGIIWRIG 1567


>ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [Sorghum bicolor]
           gi|241926916|gb|EES00061.1| hypothetical protein
           SORBIDRAFT_03g001780 [Sorghum bicolor]
          Length = 631

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
 Frame = -3

Query: 237 KKNGGLGIRELD--NYAHLSKIIWHIISMPHSFLSQQLKDKYFHSHLAVLHSIIVHNSSW 64
           K+ GGLG R+L   N A LS+  W +++ P S   Q LK +YF  H  +LH       S+
Sbjct: 429 KEKGGLGFRDLHLFNLAMLSRQAWRLLTNPDSLCGQVLKARYF-PHSDILHCSPRPRISY 487

Query: 63  FWYGMYKVLSIIKDNSIWQVG 1
            W  + K ++++K+  IW++G
Sbjct: 488 TWRSILKGVALLKEGIIWRIG 508