BLASTX nr result

ID: Coptis24_contig00029443 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029443
         (395 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511523.1| conserved hypothetical protein [Ricinus comm...   184   5e-45
ref|XP_002267314.1| PREDICTED: uncharacterized protein LOC100262...   184   6e-45
ref|XP_003524952.1| PREDICTED: uncharacterized protein LOC100783...   183   1e-44
ref|XP_002323568.1| predicted protein [Populus trichocarpa] gi|2...   180   1e-43
ref|XP_003609007.1| Unc-13-like protein [Medicago truncatula] gi...   179   2e-43

>ref|XP_002511523.1| conserved hypothetical protein [Ricinus communis]
           gi|223550638|gb|EEF52125.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1044

 Score =  184 bits (468), Expect = 5e-45
 Identities = 90/131 (68%), Positives = 101/131 (77%)
 Frame = +1

Query: 1   DQLIVLVEDRGSKDVVLLGHIAIPLSSIEQRLDERHVGCKWLPLXXXXXXXXXXXXRVLL 180
           D LI++VEDR SK+ + LGHI IP++SIEQR+DERHV  KW PL            R+ L
Sbjct: 541 DSLILVVEDRTSKEAISLGHIMIPVASIEQRIDERHVSSKWFPLEGAASGFYQG--RIHL 598

Query: 181 RLCLEAGYHVLDEAAHLCSDFRPTAKQLWKPAIGVLELGILGARGLLPMXXXXXXXXATD 360
           RLCLE GYHVLDEAAH+CSDFRPTAKQLWKPAIG+LELGILGARGLLPM        +TD
Sbjct: 599 RLCLEGGYHVLDEAAHVCSDFRPTAKQLWKPAIGILELGILGARGLLPMKNQCGVKGSTD 658

Query: 361 AYCVAKYGKKW 393
           AYCVAKYGKKW
Sbjct: 659 AYCVAKYGKKW 669


>ref|XP_002267314.1| PREDICTED: uncharacterized protein LOC100262158 [Vitis vinifera]
          Length = 1009

 Score =  184 bits (467), Expect = 6e-45
 Identities = 89/131 (67%), Positives = 101/131 (77%)
 Frame = +1

Query: 1   DQLIVLVEDRGSKDVVLLGHIAIPLSSIEQRLDERHVGCKWLPLXXXXXXXXXXXXRVLL 180
           D LI+LVEDR +KD +LLGH+ +P+S+IEQR+DERHV  KW PL            R+ L
Sbjct: 504 DHLILLVEDRTAKDALLLGHVVVPVSAIEQRIDERHVASKWFPLDGGCVGGPYCG-RINL 562

Query: 181 RLCLEAGYHVLDEAAHLCSDFRPTAKQLWKPAIGVLELGILGARGLLPMXXXXXXXXATD 360
           RLCLE GYHVLDEAA +CSDFRPTAKQLWKPA+GVLELGILGARGLLPM        +TD
Sbjct: 563 RLCLEGGYHVLDEAAQVCSDFRPTAKQLWKPAVGVLELGILGARGLLPMKTKGGGKGSTD 622

Query: 361 AYCVAKYGKKW 393
           AYCVAKYGKKW
Sbjct: 623 AYCVAKYGKKW 633


>ref|XP_003524952.1| PREDICTED: uncharacterized protein LOC100783882 [Glycine max]
          Length = 1025

 Score =  183 bits (465), Expect = 1e-44
 Identities = 90/131 (68%), Positives = 100/131 (76%)
 Frame = +1

Query: 1   DQLIVLVEDRGSKDVVLLGHIAIPLSSIEQRLDERHVGCKWLPLXXXXXXXXXXXXRVLL 180
           D +IVL+EDR +K+  LLGHI IPLSSIEQR+DERHV  KW  L            RV +
Sbjct: 524 DSVIVLLEDRTTKEPALLGHIVIPLSSIEQRIDERHVAAKWFTLEGGPYCG-----RVQM 578

Query: 181 RLCLEAGYHVLDEAAHLCSDFRPTAKQLWKPAIGVLELGILGARGLLPMXXXXXXXXATD 360
           RLCLE GYHVLDEAAH+CSDFRPTAKQLWKPA+G+LELGILGARGLLPM        +TD
Sbjct: 579 RLCLEGGYHVLDEAAHVCSDFRPTAKQLWKPAVGILELGILGARGLLPMKSKGGGKGSTD 638

Query: 361 AYCVAKYGKKW 393
           AYCVAKYGKKW
Sbjct: 639 AYCVAKYGKKW 649


>ref|XP_002323568.1| predicted protein [Populus trichocarpa] gi|222868198|gb|EEF05329.1|
           predicted protein [Populus trichocarpa]
          Length = 1053

 Score =  180 bits (456), Expect = 1e-43
 Identities = 92/139 (66%), Positives = 100/139 (71%), Gaps = 8/139 (5%)
 Frame = +1

Query: 1   DQLIVLVEDRGSKDVVLLGHIAIPLSSIEQRLDERHVGCKWLPLXXXXXXXXXXXX---- 168
           + LI+LVEDR +K+ VLLGHI IP+SSIEQR DERHV  KW  L                
Sbjct: 540 ESLILLVEDRTTKEAVLLGHIIIPVSSIEQRYDERHVASKWFALEGGGGDTGGAGCATGG 599

Query: 169 ----RVLLRLCLEAGYHVLDEAAHLCSDFRPTAKQLWKPAIGVLELGILGARGLLPMXXX 336
               R+ LRLCLE GYHVLDEAAH+CSDFRPTAKQLWKPAIGVLELGILGARGLLPM   
Sbjct: 600 SYRGRIHLRLCLEGGYHVLDEAAHVCSDFRPTAKQLWKPAIGVLELGILGARGLLPMKTK 659

Query: 337 XXXXXATDAYCVAKYGKKW 393
                +TDAYCVAKYGKKW
Sbjct: 660 GGGKGSTDAYCVAKYGKKW 678


>ref|XP_003609007.1| Unc-13-like protein [Medicago truncatula]
           gi|355510062|gb|AES91204.1| Unc-13-like protein
           [Medicago truncatula]
          Length = 1036

 Score =  179 bits (454), Expect = 2e-43
 Identities = 85/131 (64%), Positives = 99/131 (75%)
 Frame = +1

Query: 1   DQLIVLVEDRGSKDVVLLGHIAIPLSSIEQRLDERHVGCKWLPLXXXXXXXXXXXXRVLL 180
           D +++LVEDR +K+  LLGH+ IPL+SIEQR+D+RHV  KW PL            RV L
Sbjct: 536 DSMVLLVEDRTTKEAALLGHVVIPLTSIEQRIDDRHVPAKWFPLEGGSYCG-----RVHL 590

Query: 181 RLCLEAGYHVLDEAAHLCSDFRPTAKQLWKPAIGVLELGILGARGLLPMXXXXXXXXATD 360
           RLCLE GYHVLDEAAH+CSDFRPTAK LWKP +G+LELGILGARGLLPM        +TD
Sbjct: 591 RLCLEGGYHVLDEAAHVCSDFRPTAKSLWKPPVGILELGILGARGLLPMKSKGPGKGSTD 650

Query: 361 AYCVAKYGKKW 393
           +YCVAKYGKKW
Sbjct: 651 SYCVAKYGKKW 661


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