BLASTX nr result

ID: Coptis24_contig00029439 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029439
         (311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510481.1| tetratricopeptide repeat protein, tpr, putat...    65   6e-09
ref|NP_172007.1| Calcium-binding tetratricopeptide family protei...    62   4e-08
ref|XP_002892269.1| calcium-binding EF hand family protein [Arab...    62   4e-08
dbj|BAF01292.1| putative O-GlcNAc transferase [Arabidopsis thali...    62   4e-08
ref|XP_002879390.1| calcium-binding EF hand family protein [Arab...    61   8e-08

>ref|XP_002510481.1| tetratricopeptide repeat protein, tpr, putative [Ricinus communis]
           gi|223551182|gb|EEF52668.1| tetratricopeptide repeat
           protein, tpr, putative [Ricinus communis]
          Length = 804

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 30/44 (68%), Positives = 37/44 (84%)
 Frame = +1

Query: 178 MALREMRVEKVKKIFQKFDKNKDGGLNTKEMSSLVISVNPRVQF 309
           M  R  R EKVK+IFQKFD NKDGGLN +EM++LV++VNPRV+F
Sbjct: 1   MTTRGSRSEKVKRIFQKFDTNKDGGLNREEMAALVVAVNPRVKF 44


>ref|NP_172007.1| Calcium-binding tetratricopeptide family protein [Arabidopsis
           thaliana] gi|75318061|sp|O23052.1|Y1515_ARATH RecName:
           Full=Uncharacterized TPR repeat-containing protein
           At1g05150 gi|2388582|gb|AAB71463.1| Contains similarity
           to Rattus O-GlcNAc transferase (gb|U76557) [Arabidopsis
           thaliana] gi|332189674|gb|AEE27795.1| Calcium-binding
           tetratricopeptide family protein [Arabidopsis thaliana]
          Length = 808

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 29/44 (65%), Positives = 37/44 (84%)
 Frame = +1

Query: 178 MALREMRVEKVKKIFQKFDKNKDGGLNTKEMSSLVISVNPRVQF 309
           MA R  R EKVK+IFQ+FD N DGGLN +EM++LV++VNPRV+F
Sbjct: 1   MATRGSRSEKVKRIFQQFDGNHDGGLNREEMAALVVAVNPRVKF 44


>ref|XP_002892269.1| calcium-binding EF hand family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297338111|gb|EFH68528.1| calcium-binding EF
           hand family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 809

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 29/44 (65%), Positives = 37/44 (84%)
 Frame = +1

Query: 178 MALREMRVEKVKKIFQKFDKNKDGGLNTKEMSSLVISVNPRVQF 309
           MA R  R EKVK+IFQ+FD N DGGLN +EM++LV++VNPRV+F
Sbjct: 1   MATRGSRSEKVKRIFQQFDGNHDGGLNREEMAALVVAVNPRVKF 44


>dbj|BAF01292.1| putative O-GlcNAc transferase [Arabidopsis thaliana]
          Length = 808

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 29/44 (65%), Positives = 37/44 (84%)
 Frame = +1

Query: 178 MALREMRVEKVKKIFQKFDKNKDGGLNTKEMSSLVISVNPRVQF 309
           MA R  R EKVK+IFQ+FD N DGGLN +EM++LV++VNPRV+F
Sbjct: 1   MATRGSRSEKVKRIFQQFDGNHDGGLNREEMAALVVAVNPRVKF 44


>ref|XP_002879390.1| calcium-binding EF hand family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297325229|gb|EFH55649.1| calcium-binding EF
           hand family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 800

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 28/44 (63%), Positives = 37/44 (84%)
 Frame = +1

Query: 178 MALREMRVEKVKKIFQKFDKNKDGGLNTKEMSSLVISVNPRVQF 309
           M  R  R EKVK+IFQ+FD N+DGGL+ +EMS+LV++VNPRV+F
Sbjct: 1   MTTRGSRSEKVKRIFQQFDGNRDGGLSREEMSALVVAVNPRVKF 44


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