BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029432
         (423 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269762.1| PREDICTED: pentatricopeptide repeat-containi...   174   9e-42
emb|CBI28363.3| unnamed protein product [Vitis vinifera]              172   3e-41
ref|NP_001047017.1| Os02g0529900 [Oryza sativa Japonica Group] g...   115   4e-24
gb|EAY86119.1| hypothetical protein OsI_07491 [Oryza sativa Indi...   115   4e-24
ref|XP_003575063.1| PREDICTED: pentatricopeptide repeat-containi...   112   4e-23

>ref|XP_002269762.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 906

 Score =  174 bits (440), Expect = 9e-42
 Identities = 82/137 (59%), Positives = 108/137 (78%)
 Frame = +2

Query: 5   EAAQRIFERVKGKGMVTWAAIIAGYCCNGWFEEALELFQRMQLYSVEVNEYIYTSVLLAC 184
           EAA+R+F RV+      W+A+I+G+  NG F EAL+LF++MQ   ++ NE+ +TSV+LAC
Sbjct: 391 EAAKRVFTRVEQPDTAPWSALISGHSWNGCFAEALKLFRKMQFDGIKANEFTFTSVILAC 450

Query: 185 LALEDLRKGKEMHCKILRTGYGSNISVVNTLINLYSKLWHPQRALALCSLIPHGEIIWSF 364
           LALE+LRKGKE+HCKILR+GY SN SVVNTLINLYS+LW  ++AL LCS+IP  EI W+F
Sbjct: 451 LALENLRKGKELHCKILRSGYESNFSVVNTLINLYSELWQHKQALKLCSMIPDSEISWNF 510

Query: 365 LIKACLRIKDHETIFNL 415
           LI+ACL  +D+E I  L
Sbjct: 511 LIRACLGAEDYEIIHKL 527



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 32/97 (32%), Positives = 55/97 (56%)
 Frame = +2

Query: 5   EAAQRIFERVKGKGMVTWAAIIAGYCCNGWFEEALELFQRMQLYSVEVNEYIYTSVLLAC 184
           E A  +F  +    +V W++I++GY  NG  EE L +F  M    +E + + ++ VL AC
Sbjct: 114 EDAAVVFGGIDKPDLVGWSSILSGYVKNGLEEEGLRIFCDMVSGGIEPDAFAFSMVLGAC 173

Query: 185 LALEDLRKGKEMHCKILRTGYGSNISVVNTLINLYSK 295
             LE    G + HC I++ G+ S + + N+L++ Y+K
Sbjct: 174 TNLECWDFGTQAHCYIIKMGFDSCLYLENSLMDFYAK 210



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 33/95 (34%), Positives = 53/95 (55%)
 Frame = +2

Query: 5   EAAQRIFERVKGKGMVTWAAIIAGYCCNGWFEEALELFQRMQLYSVEVNEYIYTSVLLAC 184
           E  +R+F  +  K +V+W   I GY  N  + EAL +FQ +     + +++   S+L A 
Sbjct: 215 EGMRRVFSHMSEKNLVSWNTFINGYVHNFHYLEALRIFQILMEEVSQCDDFSLLSILKAV 274

Query: 185 LALEDLRKGKEMHCKILRTGYGSNISVVNTLINLY 289
             L  L  GKE+H  ILR G  +N  VV++L+++Y
Sbjct: 275 SGLGHLDHGKEIHGYILRAGIETNRYVVSSLLDMY 309


>emb|CBI28363.3| unnamed protein product [Vitis vinifera]
          Length = 930

 Score =  172 bits (436), Expect = 3e-41
 Identities = 81/137 (59%), Positives = 107/137 (78%)
 Frame = +2

Query: 5   EAAQRIFERVKGKGMVTWAAIIAGYCCNGWFEEALELFQRMQLYSVEVNEYIYTSVLLAC 184
           E A+R+F RV+      W+A+I+G+  NG F EAL+LF++MQ   ++ NE+ +TSV+LAC
Sbjct: 415 ETAKRVFTRVEQPDTAPWSALISGHSWNGCFAEALKLFRKMQFDGIKANEFTFTSVILAC 474

Query: 185 LALEDLRKGKEMHCKILRTGYGSNISVVNTLINLYSKLWHPQRALALCSLIPHGEIIWSF 364
           LALE+LRKGKE+HCKILR+GY SN SVVNTLINLYS+LW  ++AL LCS+IP  EI W+F
Sbjct: 475 LALENLRKGKELHCKILRSGYESNFSVVNTLINLYSELWQHKQALKLCSMIPDSEISWNF 534

Query: 365 LIKACLRIKDHETIFNL 415
           LI+ACL  +D+E I  L
Sbjct: 535 LIRACLGAEDYEIIHKL 551



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 32/97 (32%), Positives = 55/97 (56%)
 Frame = +2

Query: 5   EAAQRIFERVKGKGMVTWAAIIAGYCCNGWFEEALELFQRMQLYSVEVNEYIYTSVLLAC 184
           E A  +F  +    +V W++I++GY  NG  EE L +F  M    +E + + ++ VL AC
Sbjct: 173 EDAAVVFGGIDKPDLVGWSSILSGYVKNGLEEEGLRIFCDMVSGGIEPDAFAFSMVLGAC 232

Query: 185 LALEDLRKGKEMHCKILRTGYGSNISVVNTLINLYSK 295
             LE    G + HC I++ G+ S + + N+L++ Y+K
Sbjct: 233 TNLECWDFGTQAHCYIIKMGFDSCLYLENSLMDFYAK 269



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 33/95 (34%), Positives = 53/95 (55%)
 Frame = +2

Query: 5   EAAQRIFERVKGKGMVTWAAIIAGYCCNGWFEEALELFQRMQLYSVEVNEYIYTSVLLAC 184
           E  +R+F  +  K +V+W   I GY  N  + EAL +FQ +     + +++   S+L A 
Sbjct: 274 EGMRRVFSHMSEKNLVSWNTFINGYVHNFHYLEALRIFQILMEEVSQCDDFSLLSILKAV 333

Query: 185 LALEDLRKGKEMHCKILRTGYGSNISVVNTLINLY 289
             L  L  GKE+H  ILR G  +N  VV++L+++Y
Sbjct: 334 SGLGHLDHGKEIHGYILRAGIETNRYVVSSLLDMY 368


>ref|NP_001047017.1| Os02g0529900 [Oryza sativa Japonica Group]
           gi|49388326|dbj|BAD25438.1| pentatricopeptide (PPR)
           repeat-containing protein-like [Oryza sativa Japonica
           Group] gi|113536548|dbj|BAF08931.1| Os02g0529900 [Oryza
           sativa Japonica Group] gi|125582364|gb|EAZ23295.1|
           hypothetical protein OsJ_06992 [Oryza sativa Japonica
           Group] gi|215696993|dbj|BAG90987.1| unnamed protein
           product [Oryza sativa Japonica Group]
          Length = 787

 Score =  115 bits (288), Expect = 4e-24
 Identities = 60/137 (43%), Positives = 82/137 (59%)
 Frame = +2

Query: 5   EAAQRIFERVKGKGMVTWAAIIAGYCCNGWFEEALELFQRMQLYSVEVNEYIYTSVLLAC 184
           E A  +F R K    V W+AII+G C NG FE A+ LF+ MQL  V+ NE+ YTSVL AC
Sbjct: 434 EEAHILFSRTKDPCTVAWSAIISGSCLNGQFERAIHLFRTMQLEHVQPNEFTYTSVLTAC 493

Query: 185 LALEDLRKGKEMHCKILRTGYGSNISVVNTLINLYSKLWHPQRALALCSLIPHGEIIWSF 364
           +AL D+  G E+H   +R GYG++ SV+ +LI+ Y +     +AL LC  + + EI W  
Sbjct: 494 MALGDVVSGMEIHSNSIRNGYGTSDSVLRSLISFYLREGQFNQALRLCLSLSNSEISWGT 553

Query: 365 LIKACLRIKDHETIFNL 415
           L +    + DH  I NL
Sbjct: 554 LFQEFAELGDHLGILNL 570



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 27/99 (27%), Positives = 57/99 (57%), Gaps = 3/99 (3%)
 Frame = +2

Query: 5   EAAQRIFERV--KGKGMVTWAAIIAGYCCNGWFEEALELFQRMQLYSVEVNEYIYTSVLL 178
           + A++ F+ +  + + +V W  +++GY  +G   EAL+L  RM  + +  + ++++  L 
Sbjct: 53  QPARQAFDAMLPRDRSLVAWTVLMSGYATHGPASEALDLLLRMVEWPLRPDAFVFSVALR 112

Query: 179 ACLALEDLRKGKEMHCKILRTGY-GSNISVVNTLINLYS 292
           AC A   L  G+++H    + GY G+++ V N L+ +Y+
Sbjct: 113 ACAAAGSLGVGRQVHAAAAKMGYVGADLFVANGLVTMYA 151


>gb|EAY86119.1| hypothetical protein OsI_07491 [Oryza sativa Indica Group]
          Length = 787

 Score =  115 bits (288), Expect = 4e-24
 Identities = 60/137 (43%), Positives = 82/137 (59%)
 Frame = +2

Query: 5   EAAQRIFERVKGKGMVTWAAIIAGYCCNGWFEEALELFQRMQLYSVEVNEYIYTSVLLAC 184
           E A  +F R K    V W+AII+G C NG FE A+ LF+ MQL  V+ NE+ YTSVL AC
Sbjct: 434 EEAHILFSRTKDPCTVAWSAIISGSCLNGQFERAIHLFRTMQLEHVQPNEFTYTSVLTAC 493

Query: 185 LALEDLRKGKEMHCKILRTGYGSNISVVNTLINLYSKLWHPQRALALCSLIPHGEIIWSF 364
           +AL D+  G E+H   +R GYG++ SV+ +LI+ Y +     +AL LC  + + EI W  
Sbjct: 494 MALGDVVSGMEIHSNSIRNGYGTSDSVLRSLISFYLREGQFNQALRLCLSLSNSEISWGT 553

Query: 365 LIKACLRIKDHETIFNL 415
           L +    + DH  I NL
Sbjct: 554 LFQEFAELGDHLGILNL 570



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 27/99 (27%), Positives = 57/99 (57%), Gaps = 3/99 (3%)
 Frame = +2

Query: 5   EAAQRIFERV--KGKGMVTWAAIIAGYCCNGWFEEALELFQRMQLYSVEVNEYIYTSVLL 178
           + A++ F+ +  + + +V W  +++GY  +G   EAL+L  RM  + +  + ++++  L 
Sbjct: 53  QPARQAFDAMLPRDRSLVAWTVLMSGYATHGPASEALDLLLRMVEWPLRPDAFVFSVALR 112

Query: 179 ACLALEDLRKGKEMHCKILRTGY-GSNISVVNTLINLYS 292
           AC A   L  G+++H    + GY G+++ V N L+ +Y+
Sbjct: 113 ACAAAGSLGVGRQVHAAAAKMGYVGADLFVANGLVTMYA 151


>ref|XP_003575063.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Brachypodium distachyon]
          Length = 789

 Score =  112 bits (279), Expect = 4e-23
 Identities = 59/137 (43%), Positives = 81/137 (59%)
 Frame = +2

Query: 5   EAAQRIFERVKGKGMVTWAAIIAGYCCNGWFEEALELFQRMQLYSVEVNEYIYTSVLLAC 184
           E +  +F   K  G   W+A+I+G C NG FE AL LF+RMQL  V  NE+ YTSVL AC
Sbjct: 436 EESHLLFSTTKYPGTAEWSAVISGNCLNGQFERALHLFRRMQLDHVRPNEFTYTSVLTAC 495

Query: 185 LALEDLRKGKEMHCKILRTGYGSNISVVNTLINLYSKLWHPQRALALCSLIPHGEIIWSF 364
           + L D+  G E+H   +R GYG++ SVV +LI+ Y +     +AL LC  + + EI W  
Sbjct: 496 IDLGDVVGGIEIHGNSVRNGYGTHASVVKSLISFYLREGQFHQALKLCLSLSNREISWDT 555

Query: 365 LIKACLRIKDHETIFNL 415
           L+K   +  DH  + NL
Sbjct: 556 LVKEFSQAGDHIGVLNL 572



 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 32/99 (32%), Positives = 60/99 (60%), Gaps = 3/99 (3%)
 Frame = +2

Query: 5   EAAQRIFERVK--GKGMVTWAAIIAGYCCNGWFEEALELFQRMQLYSVEVNEYIYTSVLL 178
           E A+++F+ +    + +V W AI++GY  +G   EAL L  RM  +S+  + ++++  L 
Sbjct: 55  EPARQVFDAMPPPARSLVAWTAIMSGYATHGPASEALVLLLRMMAWSLRPDGFVFSVALR 114

Query: 179 ACLALEDLRKGKEMHCKILRTGY-GSNISVVNTLINLYS 292
           AC A+   R G+++HC   + GY G+++ V N L+ +Y+
Sbjct: 115 ACAAIGSQRFGRQLHCAAAKMGYVGADLFVANGLLTMYA 153



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 27/95 (28%), Positives = 52/95 (54%)
 Frame = +2

Query: 11  AQRIFERVKGKGMVTWAAIIAGYCCNGWFEEALELFQRMQLYSVEVNEYIYTSVLLACLA 190
           A+++F  +    +V+W ++++GY  NG   EA+ LF  M    +  + +  +  L A  +
Sbjct: 161 AEKVFNGIATPDLVSWTSMLSGYTENGCHAEAVMLFVEMVHAGIRCDAFTLSVALRAASS 220

Query: 191 LEDLRKGKEMHCKILRTGYGSNISVVNTLINLYSK 295
           L +L  G ++HC I++ G+ ++  + N LI  Y K
Sbjct: 221 LANLSLGHQLHCCIIKLGFSNSGFLENCLIEFYGK 255