BLASTX nr result
ID: Coptis24_contig00029431
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00029431
(412 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI28363.3| unnamed protein product [Vitis vinifera] 152 4e-35
ref|XP_002269762.1| PREDICTED: pentatricopeptide repeat-containi... 152 4e-35
ref|XP_003575063.1| PREDICTED: pentatricopeptide repeat-containi... 121 7e-26
ref|XP_002453928.1| hypothetical protein SORBIDRAFT_04g021580 [S... 113 1e-23
gb|EAY86119.1| hypothetical protein OsI_07491 [Oryza sativa Indi... 112 3e-23
>emb|CBI28363.3| unnamed protein product [Vitis vinifera]
Length = 930
Score = 152 bits (383), Expect = 4e-35
Identities = 75/137 (54%), Positives = 95/137 (69%)
Frame = -2
Query: 411 LLQMIQRSHGKLDSATVCYIFNFCANSCLLNVGTQQQAYLTKRGFVSDIITNNSLIKMYS 232
LL IQ SHG LD + C IF C++ LLNVGTQ AY+TKRG +S +NSLI+MYS
Sbjct: 551 LLWRIQVSHGNLDPVSACDIFASCSSPVLLNVGTQAHAYMTKRGLISHPTISNSLIQMYS 610
Query: 231 ECGMISDAVSAFRSLPEKNSDSWTAVISANVDHGYPFKAIELFKQMCWRKKLPDSSTLTS 52
CG +AV AF +PEK++ SWT+++SA V+HG+P +A+ L QM W+ K D ST S
Sbjct: 611 ACGKFDEAVQAFNLMPEKDTCSWTSILSARVEHGHPSEALNLISQMRWKNKPADQSTFRS 670
Query: 51 ILKAYAQMRLVDEAFRL 1
+L A AQM LVDEAFRL
Sbjct: 671 VLNACAQMGLVDEAFRL 687
Score = 60.5 bits (145), Expect = 1e-07
Identities = 35/120 (29%), Positives = 57/120 (47%)
Frame = -2
Query: 375 DSATVCYIFNFCANSCLLNVGTQQQAYLTKRGFVSDIITNNSLIKMYSECGMISDAVSAF 196
D+ + C N + GTQ Y+ K GF S + NSL+ Y++CG + F
Sbjct: 221 DAFAFSMVLGACTNLECWDFGTQAHCYIIKMGFDSCLYLENSLMDFYAKCGDLEGMRRVF 280
Query: 195 RSLPEKNSDSWTAVISANVDHGYPFKAIELFKQMCWRKKLPDSSTLTSILKAYAQMRLVD 16
+ EKN SW I+ V + + +A+ +F+ + D +L SILKA + + +D
Sbjct: 281 SHMSEKNLVSWNTFINGYVHNFHYLEALRIFQILMEEVSQCDDFSLLSILKAVSGLGHLD 340
>ref|XP_002269762.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 906
Score = 152 bits (383), Expect = 4e-35
Identities = 75/137 (54%), Positives = 95/137 (69%)
Frame = -2
Query: 411 LLQMIQRSHGKLDSATVCYIFNFCANSCLLNVGTQQQAYLTKRGFVSDIITNNSLIKMYS 232
LL IQ SHG LD + C IF C++ LLNVGTQ AY+TKRG +S +NSLI+MYS
Sbjct: 527 LLWRIQVSHGNLDPVSACDIFASCSSPVLLNVGTQAHAYMTKRGLISHPTISNSLIQMYS 586
Query: 231 ECGMISDAVSAFRSLPEKNSDSWTAVISANVDHGYPFKAIELFKQMCWRKKLPDSSTLTS 52
CG +AV AF +PEK++ SWT+++SA V+HG+P +A+ L QM W+ K D ST S
Sbjct: 587 ACGKFDEAVQAFNLMPEKDTCSWTSILSARVEHGHPSEALNLISQMRWKNKPADQSTFRS 646
Query: 51 ILKAYAQMRLVDEAFRL 1
+L A AQM LVDEAFRL
Sbjct: 647 VLNACAQMGLVDEAFRL 663
Score = 60.5 bits (145), Expect = 1e-07
Identities = 35/120 (29%), Positives = 57/120 (47%)
Frame = -2
Query: 375 DSATVCYIFNFCANSCLLNVGTQQQAYLTKRGFVSDIITNNSLIKMYSECGMISDAVSAF 196
D+ + C N + GTQ Y+ K GF S + NSL+ Y++CG + F
Sbjct: 162 DAFAFSMVLGACTNLECWDFGTQAHCYIIKMGFDSCLYLENSLMDFYAKCGDLEGMRRVF 221
Query: 195 RSLPEKNSDSWTAVISANVDHGYPFKAIELFKQMCWRKKLPDSSTLTSILKAYAQMRLVD 16
+ EKN SW I+ V + + +A+ +F+ + D +L SILKA + + +D
Sbjct: 222 SHMSEKNLVSWNTFINGYVHNFHYLEALRIFQILMEEVSQCDDFSLLSILKAVSGLGHLD 281
>ref|XP_003575063.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Brachypodium distachyon]
Length = 789
Score = 121 bits (303), Expect = 7e-26
Identities = 64/136 (47%), Positives = 86/136 (63%)
Frame = -2
Query: 411 LLQMIQRSHGKLDSATVCYIFNFCANSCLLNVGTQQQAYLTKRGFVSDIITNNSLIKMYS 232
L +IQRS G LD T C+I C LL G Q AYLTKRG S ++ LI MYS
Sbjct: 572 LFHVIQRSGGVLDYPTACHILTSCGKLKLLCEGLQAHAYLTKRGLASKPCISSHLIDMYS 631
Query: 231 ECGMISDAVSAFRSLPEKNSDSWTAVISANVDHGYPFKAIELFKQMCWRKKLPDSSTLTS 52
+CG + DA AFR + +KN+ WT+VI A++++G P AI+LF QM ++K+P S S
Sbjct: 632 KCGTVKDAFDAFRYMSDKNASCWTSVIIAHLENGCPEIAIDLFVQMLRKEKIPTSLAFLS 691
Query: 51 ILKAYAQMRLVDEAFR 4
+LKA A++ LV EAF+
Sbjct: 692 VLKACAEVGLVSEAFQ 707
Score = 64.7 bits (156), Expect = 7e-09
Identities = 37/115 (32%), Positives = 56/115 (48%)
Frame = -2
Query: 384 GKLDSATVCYIFNFCANSCLLNVGTQQQAYLTKRGFVSDIITNNSLIKMYSECGMISDAV 205
GK D V CA+ L G AY+ K SD +SL+ MY++CG + ++
Sbjct: 380 GKFDQFIVASSLRSCASDLDLAAGRMLHAYILKLNMNSDAFVTSSLVDMYAKCGCLEESH 439
Query: 204 SAFRSLPEKNSDSWTAVISANVDHGYPFKAIELFKQMCWRKKLPDSSTLTSILKA 40
F + + W+AVIS N +G +A+ LF++M P+ T TS+L A
Sbjct: 440 LLFSTTKYPGTAEWSAVISGNCLNGQFERALHLFRRMQLDHVRPNEFTYTSVLTA 494
>ref|XP_002453928.1| hypothetical protein SORBIDRAFT_04g021580 [Sorghum bicolor]
gi|241933759|gb|EES06904.1| hypothetical protein
SORBIDRAFT_04g021580 [Sorghum bicolor]
Length = 798
Score = 113 bits (283), Expect = 1e-23
Identities = 61/136 (44%), Positives = 79/136 (58%)
Frame = -2
Query: 411 LLQMIQRSHGKLDSATVCYIFNFCANSCLLNVGTQQQAYLTKRGFVSDIITNNSLIKMYS 232
L +IQR LD T I + C LL G Q AY+TKRG S TN+ LI MYS
Sbjct: 582 LFHVIQRCGANLDYHTARLILSSCGKLGLLEEGLQAHAYMTKRGLASTACTNSYLIDMYS 641
Query: 231 ECGMISDAVSAFRSLPEKNSDSWTAVISANVDHGYPFKAIELFKQMCWRKKLPDSSTLTS 52
CG + A AF +P+K++ SWT++++ANV++G P AI LF QM K P S
Sbjct: 642 SCGSLRHAFDAFNYMPDKDASSWTSIVAANVENGCPETAIRLFSQMQKEKCRPTPEAFLS 701
Query: 51 ILKAYAQMRLVDEAFR 4
+LKA A+ LV+EAFR
Sbjct: 702 VLKACARTGLVNEAFR 717
Score = 58.9 bits (141), Expect = 4e-07
Identities = 35/115 (30%), Positives = 53/115 (46%)
Frame = -2
Query: 384 GKLDSATVCYIFNFCANSCLLNVGTQQQAYLTKRGFVSDIITNNSLIKMYSECGMISDAV 205
GKLD V CA+ L G A + K D +SL+ MY++CG + ++
Sbjct: 390 GKLDQFIVASSLKSCASGLDLVAGRMLHACILKSNMNPDSFVTSSLVDMYAKCGALEESN 449
Query: 204 SAFRSLPEKNSDSWTAVISANVDHGYPFKAIELFKQMCWRKKLPDSSTLTSILKA 40
F + W+A IS N +G +A+ LF++M P+ T T+IL A
Sbjct: 450 MLFSRTKNPGTAVWSAAISGNCLNGQYGRAVHLFRRMQSEHVQPNEFTYTAILTA 504
Score = 54.7 bits (130), Expect = 8e-06
Identities = 33/115 (28%), Positives = 59/115 (51%), Gaps = 5/115 (4%)
Frame = -2
Query: 357 YIFNFCANSCL----LNVGTQQQAYLTKRGFV-SDIITNNSLIKMYSECGMISDAVSAFR 193
++F+ +C L +G Q + K G+V +D+ N L+ MYS C + A F
Sbjct: 117 FVFSVALRACAAVGSLGLGRQLHGAVAKLGYVGADLFVANGLVTMYSSCQSLRCAEKVFG 176
Query: 192 SLPEKNSDSWTAVISANVDHGYPFKAIELFKQMCWRKKLPDSSTLTSILKAYAQM 28
S+ + SWT+++SA ++G +A+ LF +M D+ TL+ L+A + +
Sbjct: 177 SITSPDLVSWTSMLSAYTENGCDAEALMLFMEMARDGIACDAFTLSVALRAASSL 231
>gb|EAY86119.1| hypothetical protein OsI_07491 [Oryza sativa Indica Group]
Length = 787
Score = 112 bits (280), Expect = 3e-23
Identities = 62/136 (45%), Positives = 83/136 (61%)
Frame = -2
Query: 411 LLQMIQRSHGKLDSATVCYIFNFCANSCLLNVGTQQQAYLTKRGFVSDIITNNSLIKMYS 232
L +IQRS G LD T C I + C L G Q AYL KRG S + LI MYS
Sbjct: 570 LFHVIQRSGGVLDYPTACLILSSCGKKAHLPEGLQAHAYLMKRGLSSTGCMCDYLIDMYS 629
Query: 231 ECGMISDAVSAFRSLPEKNSDSWTAVISANVDHGYPFKAIELFKQMCWRKKLPDSSTLTS 52
CG ++ A AFR+ +NS SWT++I A+V++G P AI LF QM ++K P+S + S
Sbjct: 630 GCGSLTHAFEAFRNTSGRNSSSWTSIIMASVENGCPETAIRLFVQMLRKEKSPNSLSFLS 689
Query: 51 ILKAYAQMRLVDEAFR 4
+LKA A++ LV+EAF+
Sbjct: 690 VLKACAEIGLVNEAFQ 705
Score = 58.2 bits (139), Expect = 7e-07
Identities = 36/115 (31%), Positives = 60/115 (52%), Gaps = 1/115 (0%)
Frame = -2
Query: 342 CANSCLLNVGTQQQAYLTKRGFV-SDIITNNSLIKMYSECGMISDAVSAFRSLPEKNSDS 166
CA + L VG Q A K G+V +D+ N L+ MY+ C + A F + +S S
Sbjct: 114 CAAAGSLGVGRQVHAAAAKMGYVGADLFVANGLVTMYASCRSLGCAEKVFSGIAAPDSVS 173
Query: 165 WTAVISANVDHGYPFKAIELFKQMCWRKKLPDSSTLTSILKAYAQMRLVDEAFRL 1
WT+++SA ++G +A+ LF +M D+ TL+ L+A + + V ++L
Sbjct: 174 WTSMLSAYTENGCDTQALMLFLEMIHGGVSCDAYTLSVALRAASSLGHVRLGYQL 228
Score = 56.6 bits (135), Expect = 2e-06
Identities = 36/115 (31%), Positives = 55/115 (47%)
Frame = -2
Query: 384 GKLDSATVCYIFNFCANSCLLNVGTQQQAYLTKRGFVSDIITNNSLIKMYSECGMISDAV 205
GKLD V CA+ L G A + K D +SL+ MY++CG + +A
Sbjct: 378 GKLDQFIVASSLKSCASDLDLAAGRMLHACVLKFDVNPDPFVISSLVDMYAKCGSLEEAH 437
Query: 204 SAFRSLPEKNSDSWTAVISANVDHGYPFKAIELFKQMCWRKKLPDSSTLTSILKA 40
F + + +W+A+IS + +G +AI LF+ M P+ T TS+L A
Sbjct: 438 ILFSRTKDPCTVAWSAIISGSCLNGQFERAIHLFRTMQLEHVQPNEFTYTSVLTA 492