BLASTX nr result
ID: Coptis24_contig00029423
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00029423
(504 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI40871.3| unnamed protein product [Vitis vinifera] 86 6e-33
ref|XP_002267937.2| PREDICTED: putative cyclin-D6-1-like, partia... 86 6e-33
emb|CAN65140.1| hypothetical protein VITISV_034614 [Vitis vinifera] 86 1e-28
ref|XP_002463007.1| hypothetical protein SORBIDRAFT_02g036130 [S... 64 2e-15
emb|CBI18003.3| unnamed protein product [Vitis vinifera] 86 3e-15
>emb|CBI40871.3| unnamed protein product [Vitis vinifera]
Length = 407
Score = 85.9 bits (211), Expect(2) = 6e-33
Identities = 46/98 (46%), Positives = 62/98 (63%)
Frame = -1
Query: 504 AQYSSNLDRSVAYLAINYLDRFISKQKLRKESSGSCS*LAYHVFH*LQKMKQMDFSLNDV 325
AQYS NLD ++YLA+NY+DRFISK+++ +E L KMK++DFS +D
Sbjct: 131 AQYSCNLDNFISYLAVNYVDRFISKKEVPEEKPWILRLLVISCLSLAAKMKKIDFSYSDF 190
Query: 324 QGEEQFIFDSQTIEQAELMILGALKW*M*SSTLSFFLY 211
Q +E FIFD+Q I + EL+IL L W M S T F+Y
Sbjct: 191 QKDEGFIFDAQRIHRMELLILSTLNWRMRSITPFSFVY 228
Score = 80.1 bits (196), Expect(2) = 6e-33
Identities = 40/72 (55%), Positives = 56/72 (77%)
Frame = -3
Query: 226 FFLSLFKLQDPLLQHDLKARASDIIYKSQHEIKLLKSTPSIVMASTLLEASHELFPLQFS 47
FF+SLF+L+DP L LK RA+++I+K++ EIKLL+ PSI+ AS LL AS+ELFPLQFS
Sbjct: 229 FFISLFELKDPALTKALKDRATELIFKARDEIKLLEYKPSIIAASALLCASYELFPLQFS 288
Query: 46 NFRNTICSPSFL 11
+F+ I S ++
Sbjct: 289 SFKAAISSCEYI 300
>ref|XP_002267937.2| PREDICTED: putative cyclin-D6-1-like, partial [Vitis vinifera]
Length = 327
Score = 85.9 bits (211), Expect(2) = 6e-33
Identities = 46/98 (46%), Positives = 62/98 (63%)
Frame = -1
Query: 504 AQYSSNLDRSVAYLAINYLDRFISKQKLRKESSGSCS*LAYHVFH*LQKMKQMDFSLNDV 325
AQYS NLD ++YLA+NY+DRFISK+++ +E L KMK++DFS +D
Sbjct: 48 AQYSCNLDNFISYLAVNYVDRFISKKEVPEEKPWILRLLVISCLSLAAKMKKIDFSYSDF 107
Query: 324 QGEEQFIFDSQTIEQAELMILGALKW*M*SSTLSFFLY 211
Q +E FIFD+Q I + EL+IL L W M S T F+Y
Sbjct: 108 QKDEGFIFDAQRIHRMELLILSTLNWRMRSITPFSFVY 145
Score = 80.1 bits (196), Expect(2) = 6e-33
Identities = 40/72 (55%), Positives = 56/72 (77%)
Frame = -3
Query: 226 FFLSLFKLQDPLLQHDLKARASDIIYKSQHEIKLLKSTPSIVMASTLLEASHELFPLQFS 47
FF+SLF+L+DP L LK RA+++I+K++ EIKLL+ PSI+ AS LL AS+ELFPLQFS
Sbjct: 146 FFISLFELKDPALTKALKDRATELIFKARDEIKLLEYKPSIIAASALLCASYELFPLQFS 205
Query: 46 NFRNTICSPSFL 11
+F+ I S ++
Sbjct: 206 SFKAAISSCEYI 217
>emb|CAN65140.1| hypothetical protein VITISV_034614 [Vitis vinifera]
Length = 435
Score = 85.9 bits (211), Expect(2) = 1e-28
Identities = 46/98 (46%), Positives = 62/98 (63%)
Frame = -1
Query: 504 AQYSSNLDRSVAYLAINYLDRFISKQKLRKESSGSCS*LAYHVFH*LQKMKQMDFSLNDV 325
AQYS NLD ++YLA+NY+DRFISK+++ +E L KMK++DFS +D
Sbjct: 132 AQYSCNLDNFISYLAVNYVDRFISKKEVPEEKPWILRLLVISCLSLAAKMKKIDFSYSDF 191
Query: 324 QGEEQFIFDSQTIEQAELMILGALKW*M*SSTLSFFLY 211
Q +E FIFD+Q I + EL+IL L W M S T F+Y
Sbjct: 192 QKDEGFIFDAQRIHRMELLILSTLNWRMRSITPFSFVY 229
Score = 65.5 bits (158), Expect(2) = 1e-28
Identities = 40/99 (40%), Positives = 56/99 (56%), Gaps = 27/99 (27%)
Frame = -3
Query: 226 FFLSLFKLQDPLLQHDLKARASDIIYKSQH---------------------------EIK 128
FF+SLF+L+DP L LK RA+++I+K++ EIK
Sbjct: 230 FFISLFELKDPALTKALKDRATELIFKARDGKIGYRFFKLIFEEARFLRNIIVVYIAEIK 289
Query: 127 LLKSTPSIVMASTLLEASHELFPLQFSNFRNTICSPSFL 11
LL+ PSI+ AS LL AS+ELFPLQFS+F+ I S ++
Sbjct: 290 LLEYKPSIIAASALLCASYELFPLQFSSFKAAISSCEYI 328
>ref|XP_002463007.1| hypothetical protein SORBIDRAFT_02g036130 [Sorghum bicolor]
gi|241926384|gb|EER99528.1| hypothetical protein
SORBIDRAFT_02g036130 [Sorghum bicolor]
Length = 314
Score = 63.5 bits (153), Expect(2) = 2e-15
Identities = 39/92 (42%), Positives = 57/92 (61%), Gaps = 5/92 (5%)
Frame = -1
Query: 474 VAYLAINYLDRFISKQKLRKESSGSCS*LAYHVFH*LQKMKQM-DFSLNDVQGEEQFIFD 298
VAYLA+NY+DRF+SK++L E LA KM+++ FS++ +Q +E F+FD
Sbjct: 80 VAYLALNYVDRFLSKRQLACEQQPWPRLLALSCLSLAAKMQRVATFSIDHIQRDEDFMFD 139
Query: 297 SQTIEQAELMILGALKW*M*SST----LSFFL 214
+ T+ + E +LGAL+W S T LSFFL
Sbjct: 140 AATVRRMERWVLGALEWRARSVTPFAFLSFFL 171
Score = 43.1 bits (100), Expect(2) = 2e-15
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Frame = -3
Query: 229 SFFLSLF--KLQDPLLQHDLKARASDIIYKSQHEIKLLKSTPSIVMASTLLEASHELFPL 56
SFFLS+ Q P +KARA D++ ++Q E+K+ + +PS+V AS LL A+ E+
Sbjct: 168 SFFLSVCYPPPQHPPQVAAIKARAVDLLLRAQPEVKMAEFSPSVVAASALLAAAREVAAA 227
Query: 55 QFSNFRNTICSPSFLFS 5
F+ + + F+ S
Sbjct: 228 NLPAFQAGVAACPFVNS 244
>emb|CBI18003.3| unnamed protein product [Vitis vinifera]
Length = 315
Score = 85.9 bits (211), Expect = 3e-15
Identities = 54/124 (43%), Positives = 76/124 (61%), Gaps = 4/124 (3%)
Frame = -1
Query: 501 QYSSNLDRSVAYLAINYLDRFISKQKLRKESSGSCS*LAYHVFH*LQKMKQMDFSLNDVQ 322
Q SS+ D ++YLAINYLDRF+S+ ++ E LA KMK+ +FSL D Q
Sbjct: 59 QMSSSFDPFLSYLAINYLDRFLSRSEMPSEKPWILRLLAVSCVSLAAKMKKTEFSLADFQ 118
Query: 321 GEEQFIFDSQTIEQAELMILGALKW*M*SST----LSFFLYSNFKIHYYSMILKLELQIS 154
GE FIFDS+TI + E+++LGALKW M S T +SFF+ S FK+ ++ L+ ++
Sbjct: 119 GEGGFIFDSETIMRMEILVLGALKWRMRSVTPFSFISFFI-SLFKLKDPPLLEALKARVI 177
Query: 153 SINL 142
I L
Sbjct: 178 EIIL 181
Score = 82.4 bits (202), Expect = 3e-14
Identities = 46/79 (58%), Positives = 53/79 (67%), Gaps = 1/79 (1%)
Frame = -3
Query: 262 WSIEMVNVIKY-SFFLSLFKLQDPLLQHDLKARASDIIYKSQHEIKLLKSTPSIVMASTL 86
W + V + SFF+SLFKL+DP L LKAR +II KSQ EIKLL+ PSI+ ASTL
Sbjct: 143 WRMRSVTPFSFISFFISLFKLKDPPLLEALKARVIEIILKSQKEIKLLQFKPSIIAASTL 202
Query: 85 LEASHELFPLQFSNFRNTI 29
L A HELFPLQF F I
Sbjct: 203 LYACHELFPLQFPCFMTAI 221