BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029404
         (391 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264386.1| PREDICTED: putative pentatricopeptide repeat...   174   9e-42
ref|XP_002511392.1| pentatricopeptide repeat-containing protein,...   173   1e-41
emb|CAN64813.1| hypothetical protein VITISV_024998 [Vitis vinifera]   172   2e-41
ref|XP_004139961.1| PREDICTED: putative pentatricopeptide repeat...   171   6e-41
gb|ADN33897.1| pentatricopeptide (PPR) repeat-containing protein...   171   6e-41

>ref|XP_002264386.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g03510 [Vitis vinifera] gi|298205226|emb|CBI17285.3|
           unnamed protein product [Vitis vinifera]
          Length = 430

 Score =  174 bits (440), Expect = 9e-42
 Identities = 86/131 (65%), Positives = 105/131 (80%), Gaps = 1/131 (0%)
 Frame = -2

Query: 390 AGLADEALKYFGQM-QIYGVEPRSEHYACLVDALSRSGRLREAYKVIKEMPVKATARAWG 214
           AGLADEAL YFG+M + YGVE  S+HY+C+VDALSR+GRL EAY++I+ MPVK+TA+ WG
Sbjct: 297 AGLADEALGYFGRMCKDYGVEASSDHYSCVVDALSRAGRLYEAYEIIQGMPVKSTAKTWG 356

Query: 213 ALLGGCRNCKEVELAELAANILFELEPNNAANYVLLASIYAGVGRFAEADKIRKKMKDRF 34
           ALLG CR   EVELAE+A   LFELEP+NAANYVLLA IYA VGR  EA ++R++M +  
Sbjct: 357 ALLGACRTYGEVELAEIAGRALFELEPDNAANYVLLARIYASVGRHEEAQRMRREMNEMG 416

Query: 33  VKTLPGGSWVI 1
           VK  PG SWV+
Sbjct: 417 VKAAPGSSWVV 427


>ref|XP_002511392.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550507|gb|EEF51994.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 441

 Score =  173 bits (439), Expect = 1e-41
 Identities = 86/131 (65%), Positives = 104/131 (79%), Gaps = 1/131 (0%)
 Frame = -2

Query: 390 AGLADEALKYFGQMQI-YGVEPRSEHYACLVDALSRSGRLREAYKVIKEMPVKATARAWG 214
           AGLADEAL YF +MQ  Y ++  S+HY+CLVD LSR+GRL EAYKVI+EMPVK TA+AWG
Sbjct: 311 AGLADEALDYFTKMQEGYRLQAVSDHYSCLVDVLSRAGRLYEAYKVIQEMPVKVTAKAWG 370

Query: 213 ALLGGCRNCKEVELAELAANILFELEPNNAANYVLLASIYAGVGRFAEADKIRKKMKDRF 34
           ALLG CR   E+ELAE+    LFE+EP+N ANYVLLA IYA VGR+ EA +IR++MK+R 
Sbjct: 371 ALLGACRTYGEIELAEIVGRALFEIEPDNPANYVLLARIYASVGRYDEAQRIRREMKERG 430

Query: 33  VKTLPGGSWVI 1
           VK  PG SWV+
Sbjct: 431 VKVSPGSSWVV 441


>emb|CAN64813.1| hypothetical protein VITISV_024998 [Vitis vinifera]
          Length = 513

 Score =  172 bits (437), Expect = 2e-41
 Identities = 86/130 (66%), Positives = 104/130 (80%), Gaps = 1/130 (0%)
 Frame = -2

Query: 390 AGLADEALKYFGQM-QIYGVEPRSEHYACLVDALSRSGRLREAYKVIKEMPVKATARAWG 214
           AGLADEAL YFG+M + YGVE  S+HY+C+VDALSR+GRL EAY++I+ MPVKATA+ WG
Sbjct: 297 AGLADEALGYFGRMCKDYGVEASSDHYSCVVDALSRAGRLYEAYEIIQGMPVKATAKTWG 356

Query: 213 ALLGGCRNCKEVELAELAANILFELEPNNAANYVLLASIYAGVGRFAEADKIRKKMKDRF 34
           ALLG CR   EVELAE+A   LFELEP+NAANYVLLA IYA VGR  EA ++R++M +  
Sbjct: 357 ALLGACRTYGEVELAEIAGRALFELEPDNAANYVLLARIYASVGRHEEAQRMRREMNEMG 416

Query: 33  VKTLPGGSWV 4
           VK  PG SW+
Sbjct: 417 VKAAPGSSWM 426


>ref|XP_004139961.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g03510-like [Cucumis sativus]
          Length = 391

 Score =  171 bits (433), Expect = 6e-41
 Identities = 82/130 (63%), Positives = 104/130 (80%), Gaps = 1/130 (0%)
 Frame = -2

Query: 387 GLADEALKYFGQMQI-YGVEPRSEHYACLVDALSRSGRLREAYKVIKEMPVKATARAWGA 211
           GLA+EAL YF +MQ  YG++  S+HY+CLVD LSR+GRL EAY +I+EMPV+ TA+AWGA
Sbjct: 259 GLANEALDYFNRMQRDYGLQASSDHYSCLVDVLSRAGRLHEAYDIIREMPVRVTAKAWGA 318

Query: 210 LLGGCRNCKEVELAELAANILFELEPNNAANYVLLASIYAGVGRFAEADKIRKKMKDRFV 31
           LLG CR   E+ELAE+A   LFE+EP NAANYVLLA +YA VGR  EA ++R++MK+R V
Sbjct: 319 LLGACRIYGELELAEIAGKALFEIEPENAANYVLLAKMYASVGRHEEAQRMRREMKERRV 378

Query: 30  KTLPGGSWVI 1
           K +PG SWV+
Sbjct: 379 KVVPGSSWVV 388


>gb|ADN33897.1| pentatricopeptide (PPR) repeat-containing protein [Cucumis melo
           subsp. melo]
          Length = 391

 Score =  171 bits (433), Expect = 6e-41
 Identities = 82/130 (63%), Positives = 104/130 (80%), Gaps = 1/130 (0%)
 Frame = -2

Query: 387 GLADEALKYFGQMQI-YGVEPRSEHYACLVDALSRSGRLREAYKVIKEMPVKATARAWGA 211
           GLADEAL YF +MQ  YG++  S+HY+CLVD LSR+GRL EA+ +I+EMPV+ TA+AWGA
Sbjct: 259 GLADEALDYFNRMQRDYGLQASSDHYSCLVDVLSRAGRLHEAHDIIREMPVRVTAKAWGA 318

Query: 210 LLGGCRNCKEVELAELAANILFELEPNNAANYVLLASIYAGVGRFAEADKIRKKMKDRFV 31
           LLG CR   E+ELAE+A   LFE+EP NAANYVLLA +YA VGR  EA ++R++MK+R V
Sbjct: 319 LLGACRIYGELELAEIAGKALFEIEPENAANYVLLAKMYASVGRHEEAQRMRREMKERRV 378

Query: 30  KTLPGGSWVI 1
           K +PG SWV+
Sbjct: 379 KVVPGSSWVV 388