BLASTX nr result
ID: Coptis24_contig00029402
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00029402 (281 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002526929.1| conserved hypothetical protein [Ricinus comm... 59 3e-07 emb|CBI17696.3| unnamed protein product [Vitis vinifera] 59 4e-07 ref|XP_002270991.1| PREDICTED: UPF0392 protein RCOM_0530710-like... 59 4e-07 ref|XP_003555151.1| PREDICTED: UPF0392 protein RCOM_0530710-like... 58 9e-07 ref|XP_002300081.1| predicted protein [Populus trichocarpa] gi|2... 56 3e-06 >ref|XP_002526929.1| conserved hypothetical protein [Ricinus communis] gi|223533681|gb|EEF35416.1| conserved hypothetical protein [Ricinus communis] Length = 400 Score = 59.3 bits (142), Expect = 3e-07 Identities = 30/62 (48%), Positives = 36/62 (58%) Frame = +1 Query: 76 ENGDTMFSPRFKSVAAMAGWXXXXXXXXXXXXXXXPDREPKHKKRINTQFKSPPQISSTR 255 +N D MFSPRFKS+AAMAGW PDR KHKKR + F++PP SS R Sbjct: 24 QNMDNMFSPRFKSLAAMAGWDEESILTASLIVEDTPDRLFKHKKRSDLHFQTPPSNSSRR 83 Query: 256 TR 261 + Sbjct: 84 AQ 85 >emb|CBI17696.3| unnamed protein product [Vitis vinifera] Length = 1019 Score = 58.9 bits (141), Expect = 4e-07 Identities = 30/68 (44%), Positives = 38/68 (55%) Frame = +1 Query: 73 DENGDTMFSPRFKSVAAMAGWXXXXXXXXXXXXXXXPDREPKHKKRINTQFKSPPQISST 252 D + + +FSPRFKSVAA+AGW PDR KHKKR + FK+PP S Sbjct: 636 DGSAECVFSPRFKSVAALAGWDEEALLIASLVVEDTPDRLVKHKKRSDLTFKTPPSNSRR 695 Query: 253 RTRVQIRN 276 + R Q R+ Sbjct: 696 KRRTQRRS 703 >ref|XP_002270991.1| PREDICTED: UPF0392 protein RCOM_0530710-like [Vitis vinifera] Length = 908 Score = 58.9 bits (141), Expect = 4e-07 Identities = 30/68 (44%), Positives = 38/68 (55%) Frame = +1 Query: 73 DENGDTMFSPRFKSVAAMAGWXXXXXXXXXXXXXXXPDREPKHKKRINTQFKSPPQISST 252 D + + +FSPRFKSVAA+AGW PDR KHKKR + FK+PP S Sbjct: 590 DGSAECVFSPRFKSVAALAGWDEEALLIASLVVEDTPDRLVKHKKRSDLTFKTPPSNSRR 649 Query: 253 RTRVQIRN 276 + R Q R+ Sbjct: 650 KRRTQRRS 657 >ref|XP_003555151.1| PREDICTED: UPF0392 protein RCOM_0530710-like [Glycine max] Length = 937 Score = 57.8 bits (138), Expect = 9e-07 Identities = 31/67 (46%), Positives = 39/67 (58%) Frame = +1 Query: 76 ENGDTMFSPRFKSVAAMAGWXXXXXXXXXXXXXXXPDREPKHKKRINTQFKSPPQISSTR 255 +N T+FSPRFKS AAMAGW PDR+PKHKKR K+PP +S+R Sbjct: 582 QNLATLFSPRFKSAAAMAGWDEEALLLASLFVEDTPDRDPKHKKRYVWHSKTPP--NSSR 639 Query: 256 TRVQIRN 276 R +R+ Sbjct: 640 KRRALRS 646 >ref|XP_002300081.1| predicted protein [Populus trichocarpa] gi|222847339|gb|EEE84886.1| predicted protein [Populus trichocarpa] Length = 915 Score = 56.2 bits (134), Expect = 3e-06 Identities = 26/60 (43%), Positives = 36/60 (60%) Frame = +1 Query: 76 ENGDTMFSPRFKSVAAMAGWXXXXXXXXXXXXXXXPDREPKHKKRINTQFKSPPQISSTR 255 +N + +FSPRFKSVAAMAGW P+R+ +HKKR + FK+PP ++ R Sbjct: 596 QNMENLFSPRFKSVAAMAGWDEESILFASLIVEDTPERQFEHKKRSDLHFKTPPSTNTRR 655