BLASTX nr result

ID: Coptis24_contig00029402 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029402
         (281 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526929.1| conserved hypothetical protein [Ricinus comm...    59   3e-07
emb|CBI17696.3| unnamed protein product [Vitis vinifera]               59   4e-07
ref|XP_002270991.1| PREDICTED: UPF0392 protein RCOM_0530710-like...    59   4e-07
ref|XP_003555151.1| PREDICTED: UPF0392 protein RCOM_0530710-like...    58   9e-07
ref|XP_002300081.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06

>ref|XP_002526929.1| conserved hypothetical protein [Ricinus communis]
           gi|223533681|gb|EEF35416.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 400

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 30/62 (48%), Positives = 36/62 (58%)
 Frame = +1

Query: 76  ENGDTMFSPRFKSVAAMAGWXXXXXXXXXXXXXXXPDREPKHKKRINTQFKSPPQISSTR 255
           +N D MFSPRFKS+AAMAGW               PDR  KHKKR +  F++PP  SS R
Sbjct: 24  QNMDNMFSPRFKSLAAMAGWDEESILTASLIVEDTPDRLFKHKKRSDLHFQTPPSNSSRR 83

Query: 256 TR 261
            +
Sbjct: 84  AQ 85


>emb|CBI17696.3| unnamed protein product [Vitis vinifera]
          Length = 1019

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 30/68 (44%), Positives = 38/68 (55%)
 Frame = +1

Query: 73  DENGDTMFSPRFKSVAAMAGWXXXXXXXXXXXXXXXPDREPKHKKRINTQFKSPPQISST 252
           D + + +FSPRFKSVAA+AGW               PDR  KHKKR +  FK+PP  S  
Sbjct: 636 DGSAECVFSPRFKSVAALAGWDEEALLIASLVVEDTPDRLVKHKKRSDLTFKTPPSNSRR 695

Query: 253 RTRVQIRN 276
           + R Q R+
Sbjct: 696 KRRTQRRS 703


>ref|XP_002270991.1| PREDICTED: UPF0392 protein RCOM_0530710-like [Vitis vinifera]
          Length = 908

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 30/68 (44%), Positives = 38/68 (55%)
 Frame = +1

Query: 73  DENGDTMFSPRFKSVAAMAGWXXXXXXXXXXXXXXXPDREPKHKKRINTQFKSPPQISST 252
           D + + +FSPRFKSVAA+AGW               PDR  KHKKR +  FK+PP  S  
Sbjct: 590 DGSAECVFSPRFKSVAALAGWDEEALLIASLVVEDTPDRLVKHKKRSDLTFKTPPSNSRR 649

Query: 253 RTRVQIRN 276
           + R Q R+
Sbjct: 650 KRRTQRRS 657


>ref|XP_003555151.1| PREDICTED: UPF0392 protein RCOM_0530710-like [Glycine max]
          Length = 937

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 31/67 (46%), Positives = 39/67 (58%)
 Frame = +1

Query: 76  ENGDTMFSPRFKSVAAMAGWXXXXXXXXXXXXXXXPDREPKHKKRINTQFKSPPQISSTR 255
           +N  T+FSPRFKS AAMAGW               PDR+PKHKKR     K+PP  +S+R
Sbjct: 582 QNLATLFSPRFKSAAAMAGWDEEALLLASLFVEDTPDRDPKHKKRYVWHSKTPP--NSSR 639

Query: 256 TRVQIRN 276
            R  +R+
Sbjct: 640 KRRALRS 646


>ref|XP_002300081.1| predicted protein [Populus trichocarpa] gi|222847339|gb|EEE84886.1|
           predicted protein [Populus trichocarpa]
          Length = 915

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 26/60 (43%), Positives = 36/60 (60%)
 Frame = +1

Query: 76  ENGDTMFSPRFKSVAAMAGWXXXXXXXXXXXXXXXPDREPKHKKRINTQFKSPPQISSTR 255
           +N + +FSPRFKSVAAMAGW               P+R+ +HKKR +  FK+PP  ++ R
Sbjct: 596 QNMENLFSPRFKSVAAMAGWDEESILFASLIVEDTPERQFEHKKRSDLHFKTPPSTNTRR 655


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