BLASTX nr result
ID: Coptis24_contig00029356
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00029356
(1000 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002269907.1| PREDICTED: rac-like GTP-binding protein 7 [V... 256 5e-81
ref|XP_002326847.1| predicted protein [Populus trichocarpa] gi|2... 256 7e-80
ref|XP_002526481.1| rac gtpase, putative [Ricinus communis] gi|2... 254 3e-79
gb|ABK21895.1| unknown [Picea sitchensis] gi|294462678|gb|ADE768... 251 2e-78
gb|ADE75718.1| unknown [Picea sitchensis] gi|294462091|gb|ADE765... 249 1e-77
>ref|XP_002269907.1| PREDICTED: rac-like GTP-binding protein 7 [Vitis vinifera]
gi|297734644|emb|CBI16695.3| unnamed protein product
[Vitis vinifera]
Length = 198
Score = 256 bits (655), Expect(2) = 5e-81
Identities = 122/138 (88%), Positives = 133/138 (96%)
Frame = +1
Query: 70 KFIKCVTVGDGAVGKTCLLISYTSNTFPSDYVPTVFDNFSASVMVGGEIISLGLWDTAGQ 249
+FIKCVTVGDGAVGKTCLLISYTSNTFP+DYVPTVFDNFSA+V+ G+ I+LGLWDTAGQ
Sbjct: 7 RFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLADGQTINLGLWDTAGQ 66
Query: 250 EDYNRLRPLSYRGADVFILAFSLISRPSFENISKKWVPELRHYAPSVPIVLVGTKLDLRD 429
EDYNRLRPLSYRGADVF+LAFSLISRPSFENISKKWVPELRHYAPSVPIVLVGTKLDLR+
Sbjct: 67 EDYNRLRPLSYRGADVFLLAFSLISRPSFENISKKWVPELRHYAPSVPIVLVGTKLDLRE 126
Query: 430 DKQFYLDHPGARTISTAQ 483
DKQF++D+PGA TIST Q
Sbjct: 127 DKQFHMDYPGACTISTEQ 144
Score = 72.0 bits (175), Expect(2) = 5e-81
Identities = 37/54 (68%), Positives = 39/54 (72%)
Frame = +3
Query: 507 GEELKKQIGALAYIECSSKTQQNVKVVFDAAIKVVLHXXXXXXXXXXXXLCYIL 668
GEELKKQIGALAYIECSSKTQQNVK VFDAAIKVVL C++L
Sbjct: 145 GEELKKQIGALAYIECSSKTQQNVKAVFDAAIKVVLQPPKLSKRKRKKRACHVL 198
>ref|XP_002326847.1| predicted protein [Populus trichocarpa] gi|222835162|gb|EEE73597.1|
predicted protein [Populus trichocarpa]
Length = 195
Score = 256 bits (655), Expect(2) = 7e-80
Identities = 122/138 (88%), Positives = 133/138 (96%)
Frame = +1
Query: 70 KFIKCVTVGDGAVGKTCLLISYTSNTFPSDYVPTVFDNFSASVMVGGEIISLGLWDTAGQ 249
KFIKCVTVGDGAVGKTCLLISYTSNTFP+DYVPTVFDNFSA+V+V G+ ++LGLWDTAGQ
Sbjct: 4 KFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLVDGQTVNLGLWDTAGQ 63
Query: 250 EDYNRLRPLSYRGADVFILAFSLISRPSFENISKKWVPELRHYAPSVPIVLVGTKLDLRD 429
EDYNRLRPLSYRGADVFILAFSLISRPS+EN+SKKWVPELRHYAPSVPIVLVGTKLDLR+
Sbjct: 64 EDYNRLRPLSYRGADVFILAFSLISRPSYENVSKKWVPELRHYAPSVPIVLVGTKLDLRE 123
Query: 430 DKQFYLDHPGARTISTAQ 483
D+QF LD+PGA TIST Q
Sbjct: 124 DRQFLLDYPGACTISTEQ 141
Score = 68.2 bits (165), Expect(2) = 7e-80
Identities = 35/54 (64%), Positives = 39/54 (72%)
Frame = +3
Query: 507 GEELKKQIGALAYIECSSKTQQNVKVVFDAAIKVVLHXXXXXXXXXXXXLCYIL 668
G EL+KQIGALAY+ECSSKTQQNVK VFDAAIKVVL +C+IL
Sbjct: 142 GLELQKQIGALAYVECSSKTQQNVKAVFDAAIKVVLQPPKRKKHKRKHRVCHIL 195
>ref|XP_002526481.1| rac gtpase, putative [Ricinus communis] gi|223534156|gb|EEF35872.1|
rac gtpase, putative [Ricinus communis]
Length = 202
Score = 254 bits (650), Expect(2) = 3e-79
Identities = 122/138 (88%), Positives = 132/138 (95%)
Frame = +1
Query: 70 KFIKCVTVGDGAVGKTCLLISYTSNTFPSDYVPTVFDNFSASVMVGGEIISLGLWDTAGQ 249
KFIKCVTVGDGAVGKTCLLISYTSNTFP+DYVPTVFDNFSA+VMV G+ ++LGLWDTAGQ
Sbjct: 11 KFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVMVDGKTVNLGLWDTAGQ 70
Query: 250 EDYNRLRPLSYRGADVFILAFSLISRPSFENISKKWVPELRHYAPSVPIVLVGTKLDLRD 429
EDYNRLRPLSYRGADVFILAFSLISRPS+ENISKKWVPELRHYAPSVPI+LVGTKLDLR+
Sbjct: 71 EDYNRLRPLSYRGADVFILAFSLISRPSYENISKKWVPELRHYAPSVPIILVGTKLDLRE 130
Query: 430 DKQFYLDHPGARTISTAQ 483
D QF+LD+PGA TIS Q
Sbjct: 131 DGQFHLDYPGACTISREQ 148
Score = 68.2 bits (165), Expect(2) = 3e-79
Identities = 35/54 (64%), Positives = 38/54 (70%)
Frame = +3
Query: 507 GEELKKQIGALAYIECSSKTQQNVKVVFDAAIKVVLHXXXXXXXXXXXXLCYIL 668
G ELKKQIGALAY+ECSSKTQQNVK VFDAAIK VL +C+IL
Sbjct: 149 GIELKKQIGALAYVECSSKTQQNVKAVFDAAIKAVLQPPKTKKQKRKQRVCHIL 202
>gb|ABK21895.1| unknown [Picea sitchensis] gi|294462678|gb|ADE76884.1| unknown
[Picea sitchensis]
Length = 196
Score = 251 bits (642), Expect(2) = 2e-78
Identities = 117/138 (84%), Positives = 131/138 (94%)
Frame = +1
Query: 70 KFIKCVTVGDGAVGKTCLLISYTSNTFPSDYVPTVFDNFSASVMVGGEIISLGLWDTAGQ 249
+FIKCVTVGDGAVGKTC+LISYTSNTFP+DYVPTVFDNFSA+V+V G ++LGLWDTAGQ
Sbjct: 5 RFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQ 64
Query: 250 EDYNRLRPLSYRGADVFILAFSLISRPSFENISKKWVPELRHYAPSVPIVLVGTKLDLRD 429
EDYNRLRPLSYRGADVF+LAFSLIS+ S+ENISKKW+PELRHYAPSVPI+LVGTKLDLR+
Sbjct: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENISKKWIPELRHYAPSVPIILVGTKLDLRE 124
Query: 430 DKQFYLDHPGARTISTAQ 483
DKQF+ DHPGA ISTAQ
Sbjct: 125 DKQFFADHPGAAPISTAQ 142
Score = 68.6 bits (166), Expect(2) = 2e-78
Identities = 35/54 (64%), Positives = 38/54 (70%)
Frame = +3
Query: 507 GEELKKQIGALAYIECSSKTQQNVKVVFDAAIKVVLHXXXXXXXXXXXXLCYIL 668
GE+LK+QIGA AYIECSSKTQQNVK VFDAAIKVVL C+IL
Sbjct: 143 GEDLKRQIGAAAYIECSSKTQQNVKAVFDAAIKVVLQPPRQKKRRKKQRTCFIL 196
>gb|ADE75718.1| unknown [Picea sitchensis] gi|294462091|gb|ADE76598.1| unknown
[Picea sitchensis]
Length = 196
Score = 249 bits (635), Expect(2) = 1e-77
Identities = 115/138 (83%), Positives = 130/138 (94%)
Frame = +1
Query: 70 KFIKCVTVGDGAVGKTCLLISYTSNTFPSDYVPTVFDNFSASVMVGGEIISLGLWDTAGQ 249
+FIKCVTVGDGAVGKTC+LISYTSNTFP+DYVPTVFDNFSA+V+V G ++LGLWDTAGQ
Sbjct: 5 RFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWDTAGQ 64
Query: 250 EDYNRLRPLSYRGADVFILAFSLISRPSFENISKKWVPELRHYAPSVPIVLVGTKLDLRD 429
EDYNRLRPLSYRGADVF+LAFSLIS+ S+ENISKKW+PELRHYAP+VPI+LVGTKLDLRD
Sbjct: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENISKKWIPELRHYAPNVPIILVGTKLDLRD 124
Query: 430 DKQFYLDHPGARTISTAQ 483
DKQF+ DHPGA I+T Q
Sbjct: 125 DKQFFADHPGAAPITTPQ 142
Score = 68.2 bits (165), Expect(2) = 1e-77
Identities = 34/36 (94%), Positives = 34/36 (94%)
Frame = +3
Query: 507 GEELKKQIGALAYIECSSKTQQNVKVVFDAAIKVVL 614
GEELKKQIGA AYIECSSKTQQNVK VFDAAIKVVL
Sbjct: 143 GEELKKQIGAAAYIECSSKTQQNVKAVFDAAIKVVL 178