BLASTX nr result

ID: Coptis24_contig00029355 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029355
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284642.1| PREDICTED: 1-aminocyclopropane-1-carboxylate...   122   2e-26
emb|CBI23596.3| unnamed protein product [Vitis vinifera]              120   9e-26
ref|XP_002284638.1| PREDICTED: 1-aminocyclopropane-1-carboxylate...   119   3e-25
ref|XP_003635549.1| PREDICTED: 1-aminocyclopropane-1-carboxylate...   118   6e-25
sp|P10967.1|ACCH3_SOLLC RecName: Full=1-aminocyclopropane-1-carb...   117   1e-24

>ref|XP_002284642.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1
           [Vitis vinifera] gi|147807864|emb|CAN66433.1|
           hypothetical protein VITISV_027452 [Vitis vinifera]
          Length = 365

 Score =  122 bits (307), Expect = 2e-26
 Identities = 58/110 (52%), Positives = 81/110 (73%), Gaps = 6/110 (5%)
 Frame = -2

Query: 312 KAGVKGLIDSGILKVPKMFIRPSNEVNYKSDHNASQFQVPVIDLRG------EHQKVVDE 151
           K GVKGL+D+G+ KVP+MFI+P + +   +    +QF  PV+DL+G         K+VD 
Sbjct: 27  KTGVKGLVDAGVSKVPRMFIQPPDNLRTYT----TQFNFPVVDLQGMDNDPIRRNKIVDM 82

Query: 150 IKQASETWGIFIVVNHGVPSSVLDQMIKGVIRFYDQDVEVKKRYYTRDTN 1
           +K ASETWG F VVNHG+P SVL++M++GV+RFY+QD EVKK++YTRD +
Sbjct: 83  VKDASETWGFFNVVNHGIPVSVLEEMMEGVLRFYEQDTEVKKQFYTRDAS 132


>emb|CBI23596.3| unnamed protein product [Vitis vinifera]
          Length = 359

 Score =  120 bits (302), Expect = 9e-26
 Identities = 54/110 (49%), Positives = 80/110 (72%), Gaps = 6/110 (5%)
 Frame = -2

Query: 312 KAGVKGLIDSGILKVPKMFIRPSNEVNYKSDHNASQFQVPVIDLRGEHQ------KVVDE 151
           KAGVKGL+D+G+ K+P+MFI P + +  KS    +Q ++P+IDL G +       K++D+
Sbjct: 18  KAGVKGLVDAGVAKIPRMFIHPQHNLREKSVSTNAQLRIPIIDLEGVNSDAILRAKIIDK 77

Query: 150 IKQASETWGIFIVVNHGVPSSVLDQMIKGVIRFYDQDVEVKKRYYTRDTN 1
           ++ A E WGIF +VNHG+  SVL++MIKG+ RF +QD EVKK +YTRD++
Sbjct: 78  VRNACEIWGIFQIVNHGILKSVLEEMIKGIRRFNEQDTEVKKEFYTRDSS 127


>ref|XP_002284638.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1
           [Vitis vinifera]
          Length = 363

 Score =  119 bits (298), Expect = 3e-25
 Identities = 60/108 (55%), Positives = 80/108 (74%), Gaps = 6/108 (5%)
 Frame = -2

Query: 312 KAGVKGLIDSGILKVPKMFIRPSNEVNYKSDHNASQFQVPVIDLRG------EHQKVVDE 151
           K GVKGL+D+G+ KVP+MFIRP +      D N +QF+ PVIDL G        +K+V+ 
Sbjct: 26  KEGVKGLVDAGVSKVPRMFIRPPDN---SRDCN-TQFKFPVIDLHGMDSDPIRRKKIVEM 81

Query: 150 IKQASETWGIFIVVNHGVPSSVLDQMIKGVIRFYDQDVEVKKRYYTRD 7
           +++ASETWG+F VVNHG+P SVL++M+ GV RFY+QD EVKK +YTRD
Sbjct: 82  VREASETWGLFTVVNHGIPVSVLEEMMDGVHRFYEQDNEVKKEFYTRD 129


>ref|XP_003635549.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1-like
           [Vitis vinifera]
          Length = 368

 Score =  118 bits (295), Expect = 6e-25
 Identities = 53/108 (49%), Positives = 77/108 (71%), Gaps = 6/108 (5%)
 Frame = -2

Query: 312 KAGVKGLIDSGILKVPKMFIRPSNEVNYKSDHNASQFQVPVIDLRGEHQ------KVVDE 151
           KAGVKGL+D+G+ K+P+MFI P + +  KS    +Q ++P+IDL G +       K++D+
Sbjct: 27  KAGVKGLVDAGVAKIPRMFIHPQHNLREKSVSTNAQLRIPIIDLEGVNSDAILRAKIIDK 86

Query: 150 IKQASETWGIFIVVNHGVPSSVLDQMIKGVIRFYDQDVEVKKRYYTRD 7
           ++ A E WGIF +VNHG+   VL++MIKG+ RF +QD EVKK +YTRD
Sbjct: 87  VRNACEIWGIFQIVNHGILKCVLEEMIKGIRRFNEQDTEVKKEFYTRD 134


>sp|P10967.1|ACCH3_SOLLC RecName: Full=1-aminocyclopropane-1-carboxylate oxidase homolog;
           AltName: Full=Protein E8 gi|19199|emb|CAA31789.1| E8
           protein [Solanum lycopersicum]
          Length = 363

 Score =  117 bits (293), Expect = 1e-24
 Identities = 57/109 (52%), Positives = 81/109 (74%), Gaps = 6/109 (5%)
 Frame = -2

Query: 312 KAGVKGLIDSGILKVPKMFIRPSNEVNYKSDHNASQFQVPVIDLRG------EHQKVVDE 151
           KAGVKGL+DSGI KVP++F+ P  +   K +   + F  PVIDL+G      +H+++VD+
Sbjct: 23  KAGVKGLVDSGITKVPQIFVLPPKDRAKKCE---THFVFPVIDLQGIDEDPIKHKEIVDK 79

Query: 150 IKQASETWGIFIVVNHGVPSSVLDQMIKGVIRFYDQDVEVKKRYYTRDT 4
           ++ ASE WG F VVNHG+P+SVLD+ ++G  +F++QD EVKK+YYTRDT
Sbjct: 80  VRDASEKWGFFQVVNHGIPTSVLDRTLQGTRQFFEQDNEVKKQYYTRDT 128


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