BLASTX nr result

ID: Coptis24_contig00029338 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029338
         (252 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315629.1| lysine/histidine transporter [Populus tricho...   112   3e-23
ref|XP_002298597.1| lysine/histidine transporter [Populus tricho...   110   1e-22
ref|XP_003631312.1| PREDICTED: LOW QUALITY PROTEIN: lysine histi...   109   3e-22
emb|CBI27555.3| unnamed protein product [Vitis vinifera]              109   3e-22
emb|CBI27466.3| unnamed protein product [Vitis vinifera]              109   3e-22

>ref|XP_002315629.1| lysine/histidine transporter [Populus trichocarpa]
           gi|222864669|gb|EEF01800.1| lysine/histidine transporter
           [Populus trichocarpa]
          Length = 439

 Score =  112 bits (280), Expect = 3e-23
 Identities = 52/84 (61%), Positives = 63/84 (75%)
 Frame = +1

Query: 1   PNFNXXXXXXXXXXXXXXXXXTIAWGASIHKAVQPDVDYSYKATTKTGVMFNFFNALGDV 180
           PN N                 TIAWGA+++K VQPDVDYSYKA+TKTG +F+FF+ALGD+
Sbjct: 169 PNLNSISVISLAAAVMSLSYSTIAWGATLNKGVQPDVDYSYKASTKTGAVFDFFSALGDI 228

Query: 181 AFSYAGHSVVLEIQATIPSTPENP 252
           AF+YAGH+V+LEIQATIPSTPE P
Sbjct: 229 AFAYAGHNVILEIQATIPSTPEKP 252


>ref|XP_002298597.1| lysine/histidine transporter [Populus trichocarpa]
           gi|222845855|gb|EEE83402.1| lysine/histidine transporter
           [Populus trichocarpa]
          Length = 423

 Score =  110 bits (275), Expect = 1e-22
 Identities = 53/84 (63%), Positives = 59/84 (70%)
 Frame = +1

Query: 1   PNFNXXXXXXXXXXXXXXXXXTIAWGASIHKAVQPDVDYSYKATTKTGVMFNFFNALGDV 180
           PNFN                 TIAW A++ K VQPDV Y YKATTK G +FNFF+ALGDV
Sbjct: 153 PNFNSISGVSLAAAVMSLSYSTIAWSAAVDKGVQPDVQYGYKATTKVGTVFNFFSALGDV 212

Query: 181 AFSYAGHSVVLEIQATIPSTPENP 252
           AF+YAGH+VVLEIQATIPSTPE P
Sbjct: 213 AFAYAGHNVVLEIQATIPSTPEKP 236


>ref|XP_003631312.1| PREDICTED: LOW QUALITY PROTEIN: lysine histidine transporter 1-like
           [Vitis vinifera]
          Length = 427

 Score =  109 bits (272), Expect = 3e-22
 Identities = 53/84 (63%), Positives = 60/84 (71%)
 Frame = +1

Query: 1   PNFNXXXXXXXXXXXXXXXXXTIAWGASIHKAVQPDVDYSYKATTKTGVMFNFFNALGDV 180
           PNFN                 TIAW AS+HK VQPDV Y+Y A+T TG +FNFF+ALGDV
Sbjct: 155 PNFNSITGVSFAAATMSLTYSTIAWTASVHKGVQPDVQYTYTASTTTGRVFNFFSALGDV 214

Query: 181 AFSYAGHSVVLEIQATIPSTPENP 252
           AF+YAGH+VVLEIQATIPSTPE P
Sbjct: 215 AFAYAGHNVVLEIQATIPSTPEKP 238


>emb|CBI27555.3| unnamed protein product [Vitis vinifera]
          Length = 471

 Score =  109 bits (272), Expect = 3e-22
 Identities = 53/84 (63%), Positives = 60/84 (71%)
 Frame = +1

Query: 1   PNFNXXXXXXXXXXXXXXXXXTIAWGASIHKAVQPDVDYSYKATTKTGVMFNFFNALGDV 180
           PNFN                 TIAW AS+HK VQPDV Y+Y A+T TG +FNFF+ALGDV
Sbjct: 201 PNFNSIAGVSFAAATMSLTYSTIAWTASVHKGVQPDVQYTYTASTTTGRVFNFFSALGDV 260

Query: 181 AFSYAGHSVVLEIQATIPSTPENP 252
           AF+YAGH+VVLEIQATIPSTPE P
Sbjct: 261 AFAYAGHNVVLEIQATIPSTPEKP 284


>emb|CBI27466.3| unnamed protein product [Vitis vinifera]
          Length = 274

 Score =  109 bits (272), Expect = 3e-22
 Identities = 53/84 (63%), Positives = 60/84 (71%)
 Frame = +1

Query: 1   PNFNXXXXXXXXXXXXXXXXXTIAWGASIHKAVQPDVDYSYKATTKTGVMFNFFNALGDV 180
           PNFN                 TIAW AS+HK VQPDV Y+Y A+T TG +FNFF+ALGDV
Sbjct: 50  PNFNSITGVSFAAATMSLTYSTIAWTASVHKGVQPDVQYTYTASTTTGRVFNFFSALGDV 109

Query: 181 AFSYAGHSVVLEIQATIPSTPENP 252
           AF+YAGH+VVLEIQATIPSTPE P
Sbjct: 110 AFAYAGHNVVLEIQATIPSTPEKP 133


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