BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029335
         (308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277673.1| PREDICTED: homeobox-leucine zipper protein R...    94   1e-17
ref|XP_002303433.1| predicted protein [Populus trichocarpa] gi|2...    80   2e-13
ref|XP_002518976.1| homeobox protein, putative [Ricinus communis...    77   1e-12
ref|XP_003612811.1| Homeobox-leucine zipper protein ROC3 [Medica...    77   2e-12
ref|XP_003533444.1| PREDICTED: homeobox-leucine zipper protein R...    74   9e-12

>ref|XP_002277673.1| PREDICTED: homeobox-leucine zipper protein ROC3 [Vitis vinifera]
           gi|147777871|emb|CAN60291.1| hypothetical protein
           VITISV_032685 [Vitis vinifera]
           gi|297742043|emb|CBI33830.3| unnamed protein product
           [Vitis vinifera]
          Length = 798

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 47/101 (46%), Positives = 67/101 (66%)
 Frame = -2

Query: 307 NVRLKEELERLSGIASRYSCRPIHXXXXXXXXXXPSVDLNMNIYAKNFQEQIGICTDMVP 128
           N RLKEEL+R+  +ASRY  R I           PS+DL+M+IYA+NF E +  CTDM+P
Sbjct: 199 NARLKEELDRVCCLASRYGGRAIQAIGPPPPLLAPSLDLDMSIYARNFPEPMANCTDMIP 258

Query: 127 VLSMQHNSNLAGWNQIMEHDKHLAIEFAINAIDELIKMCQM 5
           V  M  +S+      ++E +K LA+E AI+++DEL+KMCQ+
Sbjct: 259 VPLMPESSHFPEGGLVLEEEKSLALELAISSVDELVKMCQL 299


>ref|XP_002303433.1| predicted protein [Populus trichocarpa] gi|222840865|gb|EEE78412.1|
           predicted protein [Populus trichocarpa]
          Length = 774

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 47/103 (45%), Positives = 64/103 (62%), Gaps = 4/103 (3%)
 Frame = -2

Query: 307 NVRLKEELERLSGIASRYSCRPIHXXXXXXXXXXPSVDLNMNIYAKNFQEQIGICTDM-- 134
           N RL++ELER+  I SRY  R IH          PS+DL+MN+Y++ F E +G CTDM  
Sbjct: 197 NARLRDELERVCCITSRYGGRQIHSMVPVPSFVPPSLDLDMNMYSRPFPEYLGTCTDMMP 256

Query: 133 --VPVLSMQHNSNLAGWNQIMEHDKHLAIEFAINAIDELIKMC 11
             VPVL    +   AG   +ME  K LA+E A++++DEL+KMC
Sbjct: 257 VPVPVLEEPSSFPEAG-VVLMEEGKGLAMELALSSMDELVKMC 298


>ref|XP_002518976.1| homeobox protein, putative [Ricinus communis]
           gi|223541963|gb|EEF43509.1| homeobox protein, putative
           [Ricinus communis]
          Length = 810

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 42/103 (40%), Positives = 67/103 (65%), Gaps = 4/103 (3%)
 Frame = -2

Query: 307 NVRLKEELERLSGIASRYSCRPIHXXXXXXXXXXPSVDLNMNIYAKNFQEQIGICTDMVP 128
           N RL++ELER+  +ASRY  RPI           PS++L+M+IY+K F + +G C +M+P
Sbjct: 197 NARLRDELERVCCVASRYGGRPIQAIGPAPPFIPPSLELDMSIYSKLFPDSLGTCNEMMP 256

Query: 127 VLSMQHNSNLAGWNQ----IMEHDKHLAIEFAINAIDELIKMC 11
            +SM    + +   +    +ME +K LA+EFA++++DEL+KMC
Sbjct: 257 -MSMPMLPDTSCLTEAGLVLMEEEKALAMEFALSSMDELVKMC 298


>ref|XP_003612811.1| Homeobox-leucine zipper protein ROC3 [Medicago truncatula]
           gi|355514146|gb|AES95769.1| Homeobox-leucine zipper
           protein ROC3 [Medicago truncatula]
          Length = 801

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 45/104 (43%), Positives = 66/104 (63%), Gaps = 2/104 (1%)
 Frame = -2

Query: 307 NVRLKEELERLSGIASRYSCRPIHXXXXXXXXXXPSVDLNMNIYAKNFQEQIGICTDMVP 128
           N RLKEELER+  I SRY+ RP+           PS+DL+MNIY ++F + +  CT+M+P
Sbjct: 203 NARLKEELERVCCITSRYTGRPLQTMAPPSSLMPPSLDLDMNIYPRHF-DPMPPCTEMIP 261

Query: 127 V--LSMQHNSNLAGWNQIMEHDKHLAIEFAINAIDELIKMCQMS 2
           V  L  + +    G   +ME +K LA+E A +++ EL+KMCQM+
Sbjct: 262 VPMLPPEPSQFQEGGLLLMEDEKSLAMELAASSMAELVKMCQMN 305


>ref|XP_003533444.1| PREDICTED: homeobox-leucine zipper protein ROC3-like [Glycine max]
          Length = 807

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 40/101 (39%), Positives = 62/101 (61%), Gaps = 1/101 (0%)
 Frame = -2

Query: 307 NVRLKEELERLSGIASRYSCRPIHXXXXXXXXXXPSVDLNMNIYAKNFQEQIGICTDMVP 128
           N RL+EELER+  + +RY+ RPI           PS+DL+M+IY ++F + I  CT+M+P
Sbjct: 206 NARLREELERVCCLTTRYTGRPIQTMATGPTLMAPSLDLDMSIYPRHFADTIAPCTEMIP 265

Query: 127 V-LSMQHNSNLAGWNQIMEHDKHLAIEFAINAIDELIKMCQ 8
           V +     S  +    +ME +K L +E A +++ EL+KMCQ
Sbjct: 266 VPMLPPEASPFSEGGILMEEEKSLTLELAASSMAELVKMCQ 306