BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029334
         (503 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280443.1| PREDICTED: pentatricopeptide repeat-containi...   209   2e-52
dbj|BAK04418.1| predicted protein [Hordeum vulgare subsp. vulgare]    204   5e-51
ref|XP_002315895.1| predicted protein [Populus trichocarpa] gi|2...   203   1e-50
ref|XP_004161997.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   199   3e-49
ref|XP_004150483.1| PREDICTED: pentatricopeptide repeat-containi...   199   3e-49

>ref|XP_002280443.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
           mitochondrial [Vitis vinifera]
          Length = 531

 Score =  209 bits (532), Expect = 2e-52
 Identities = 102/167 (61%), Positives = 123/167 (73%)
 Frame = -2

Query: 502 GAYCWSERFKDACMVLEEMKKSGVLPNSRTYEIIIHHLIKNRRTKDAYRVFQEMESKFGC 323
           G+YC S R  DA  +++EM+K GV P +RTY+II+HHLIK RRTK+AYRVFQ M S+ GC
Sbjct: 362 GSYCQSMRMDDAYRIVDEMRKCGVGPQTRTYDIILHHLIKARRTKEAYRVFQGMSSEPGC 421

Query: 322 EPSANTYEIIVRMFCSEESVDMALQVWNQMKAKGILPSMHMFSSLINGLSRDNKLDEACA 143
           EPS +TYEI+VRMFC+EE VDMAL+VW++MKAKG+LP MHMFS+LIN L  +NKLDEAC 
Sbjct: 422 EPSVSTYEIVVRMFCNEERVDMALRVWDEMKAKGVLPGMHMFSTLINSLCYENKLDEACK 481

Query: 142 YFQEMLDSGIRPPGPLFGNXXXXXXXXXXXXXXLSFGLKLDKIRKTR 2
           YF EMLD GIRPP  +F N              L    KLDKIR T+
Sbjct: 482 YFHEMLDMGIRPPAAMFSNLKQTLLDEGKQDMVLILAQKLDKIRTTQ 528



 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 40/136 (29%), Positives = 73/136 (53%)
 Frame = -2

Query: 499 AYCWSERFKDACMVLEEMKKSGVLPNSRTYEIIIHHLIKNRRTKDAYRVFQEMESKFGCE 320
           A C S   + A  V ++MK     P+ ++Y I++    + +       V++EM+ + G E
Sbjct: 223 ALCKSRHVERAQEVFDKMKDRKFRPDIKSYTILLEGWGQEQNLLRLDEVYREMKDE-GFE 281

Query: 319 PSANTYEIIVRMFCSEESVDMALQVWNQMKAKGILPSMHMFSSLINGLSRDNKLDEACAY 140
           P A TY I++   C     D A++++++M+A   +P+ H++ +LINGL  + +L EA  +
Sbjct: 282 PDAVTYGILINAHCKARRYDAAVELFHKMEANKCMPTPHIYCTLINGLGSERRLTEALQF 341

Query: 139 FQEMLDSGIRPPGPLF 92
           F+    SG  P  P +
Sbjct: 342 FERSKASGFTPEAPTY 357



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 35/118 (29%), Positives = 59/118 (50%)
 Frame = -2

Query: 460 VLEEMKKSGVLPNSRTYEIIIHHLIKNRRTKDAYRVFQEMESKFGCEPSANTYEIIVRMF 281
           V  EMK  G  P++ TY I+I+   K RR   A  +F +ME+   C P+ + Y  ++   
Sbjct: 271 VYREMKDEGFEPDAVTYGILINAHCKARRYDAAVELFHKMEAN-KCMPTPHIYCTLINGL 329

Query: 280 CSEESVDMALQVWNQMKAKGILPSMHMFSSLINGLSRDNKLDEACAYFQEMLDSGIRP 107
            SE  +  ALQ + + KA G  P    +++++    +  ++D+A     EM   G+ P
Sbjct: 330 GSERRLTEALQFFERSKASGFTPEAPTYNAVVGSYCQSMRMDDAYRIVDEMRKCGVGP 387



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 31/124 (25%), Positives = 61/124 (49%)
 Frame = -2

Query: 499 AYCWSERFKDACMVLEEMKKSGVLPNSRTYEIIIHHLIKNRRTKDAYRVFQEMESKFGCE 320
           A+C + R+  A  +  +M+ +  +P    Y  +I+ L   RR  +A + F+  ++  G  
Sbjct: 293 AHCKARRYDAAVELFHKMEANKCMPTPHIYCTLINGLGSERRLTEALQFFERSKAS-GFT 351

Query: 319 PSANTYEIIVRMFCSEESVDMALQVWNQMKAKGILPSMHMFSSLINGLSRDNKLDEACAY 140
           P A TY  +V  +C    +D A ++ ++M+  G+ P    +  +++ L +  +  EA   
Sbjct: 352 PEAPTYNAVVGSYCQSMRMDDAYRIVDEMRKCGVGPQTRTYDIILHHLIKARRTKEAYRV 411

Query: 139 FQEM 128
           FQ M
Sbjct: 412 FQGM 415


>dbj|BAK04418.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 565

 Score =  204 bits (520), Expect = 5e-51
 Identities = 99/166 (59%), Positives = 124/166 (74%)
 Frame = -2

Query: 502 GAYCWSERFKDACMVLEEMKKSGVLPNSRTYEIIIHHLIKNRRTKDAYRVFQEMESKFGC 323
           GAYC S +F+ A  +++EM+KSG+ PNSRTY+II+HHLIK+++ ++AY VFQ M SK GC
Sbjct: 397 GAYCRSSKFQHAFKMVDEMRKSGIGPNSRTYDIILHHLIKSQKIEEAYNVFQGM-SKDGC 455

Query: 322 EPSANTYEIIVRMFCSEESVDMALQVWNQMKAKGILPSMHMFSSLINGLSRDNKLDEACA 143
           EP  NTY ++V MFCS E VD+AL+VWNQMK KG+LP MHMFS+LINGL  +N+L+EACA
Sbjct: 456 EPQLNTYTMMVGMFCSNERVDVALKVWNQMKEKGVLPCMHMFSALINGLCFENRLEEACA 515

Query: 142 YFQEMLDSGIRPPGPLFGNXXXXXXXXXXXXXXLSFGLKLDKIRKT 5
           YFQEMLD GIRPPG LF N                  LKLD++RKT
Sbjct: 516 YFQEMLDRGIRPPGQLFSNLKEALIEGGRISLAQEMALKLDELRKT 561



 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 40/125 (32%), Positives = 69/125 (55%), Gaps = 1/125 (0%)
 Frame = -2

Query: 487 SERFKDACMVLEEMKKSG-VLPNSRTYEIIIHHLIKNRRTKDAYRVFQEMESKFGCEPSA 311
           S++ K A  + +EMK++G  +P+ +TY +++      +       V+QEM    G +P  
Sbjct: 261 SKQVKKAHAIFKEMKRNGRFVPDLKTYTVLMEGWGHEKDLLMLKSVYQEMLDA-GLQPDV 319

Query: 310 NTYEIIVRMFCSEESVDMALQVWNQMKAKGILPSMHMFSSLINGLSRDNKLDEACAYFQE 131
             Y +++  FC     D A++V+ +M+  G +PS H++  LINGL  + +LDEA  YF+ 
Sbjct: 320 VAYGMLISSFCKSGKCDEAIKVFREMETNGCMPSPHVYCMLINGLGSEERLDEALKYFEL 379

Query: 130 MLDSG 116
              SG
Sbjct: 380 SKASG 384



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 37/118 (31%), Positives = 62/118 (52%)
 Frame = -2

Query: 460 VLEEMKKSGVLPNSRTYEIIIHHLIKNRRTKDAYRVFQEMESKFGCEPSANTYEIIVRMF 281
           V +EM  +G+ P+   Y ++I    K+ +  +A +VF+EME+  GC PS + Y +++   
Sbjct: 306 VYQEMLDAGLQPDVVAYGMLISSFCKSGKCDEAIKVFREMETN-GCMPSPHVYCMLINGL 364

Query: 280 CSEESVDMALQVWNQMKAKGILPSMHMFSSLINGLSRDNKLDEACAYFQEMLDSGIRP 107
            SEE +D AL+ +   KA G    +   ++++    R +K   A     EM  SGI P
Sbjct: 365 GSEERLDEALKYFELSKASGFPMEVPTCNAVVGAYCRSSKFQHAFKMVDEMRKSGIGP 422



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 32/133 (24%), Positives = 68/133 (51%), Gaps = 1/133 (0%)
 Frame = -2

Query: 484 ERFKDACMVLEEMKKSGVLPNSRTYEIIIHHLIKNRRTKDAYRVFQEMESKFGCEPSANT 305
           ++F+    ++E M+  G+L    T+ +I+    + R+ K+A   F++M   FG +   + 
Sbjct: 193 KQFRLVWSLVEAMRCRGLLSKD-TFRLIVRRYARARKVKEAVETFEKMAG-FGLKADLSD 250

Query: 304 YEIIVRMFCSEESVDMALQVWNQMKAKG-ILPSMHMFSSLINGLSRDNKLDEACAYFQEM 128
           Y  ++ +    + V  A  ++ +MK  G  +P +  ++ L+ G   +  L    + +QEM
Sbjct: 251 YNWLIDVLSKSKQVKKAHAIFKEMKRNGRFVPDLKTYTVLMEGWGHEKDLLMLKSVYQEM 310

Query: 127 LDSGIRPPGPLFG 89
           LD+G++P    +G
Sbjct: 311 LDAGLQPDVVAYG 323


>ref|XP_002315895.1| predicted protein [Populus trichocarpa] gi|222864935|gb|EEF02066.1|
           predicted protein [Populus trichocarpa]
          Length = 424

 Score =  203 bits (516), Expect = 1e-50
 Identities = 99/165 (60%), Positives = 122/165 (73%)
 Frame = -2

Query: 502 GAYCWSERFKDACMVLEEMKKSGVLPNSRTYEIIIHHLIKNRRTKDAYRVFQEMESKFGC 323
           GAYCWSER  D    ++EM+K GV P++RTY+II+HHLI+  +TK AY VFQ+M  + GC
Sbjct: 256 GAYCWSERMDDVQRTIDEMRKGGVGPSARTYDIILHHLIRAGKTKIAYSVFQKMSCE-GC 314

Query: 322 EPSANTYEIIVRMFCSEESVDMALQVWNQMKAKGILPSMHMFSSLINGLSRDNKLDEACA 143
           +PS +TYEIIVRMFC+E+ VDMA++VW+QMKAKGILP MHMFS+LIN L  ++KLDEAC 
Sbjct: 315 QPSVSTYEIIVRMFCNEDRVDMAIKVWDQMKAKGILPVMHMFSTLINSLCHESKLDEACM 374

Query: 142 YFQEMLDSGIRPPGPLFGNXXXXXXXXXXXXXXLSFGLKLDKIRK 8
           YFQEMLD GIRPP  LF N              + F  KLDK+RK
Sbjct: 375 YFQEMLDVGIRPPAQLFSNLKQNLLDEGKKDTVVVFERKLDKLRK 419



 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 40/134 (29%), Positives = 73/134 (54%)
 Frame = -2

Query: 493 CWSERFKDACMVLEEMKKSGVLPNSRTYEIIIHHLIKNRRTKDAYRVFQEMESKFGCEPS 314
           C S + + A +V ++M K G + + ++Y I++    + +       V+ EM+ + G EP 
Sbjct: 119 CKSRQVERAQLVFDKMNKRGFVADIKSYTILLEGWGQEKNLSRLMEVYNEMKDE-GFEPD 177

Query: 313 ANTYEIIVRMFCSEESVDMALQVWNQMKAKGILPSMHMFSSLINGLSRDNKLDEACAYFQ 134
             TY I++   C     D A++++++M+AK   PS H++ +LINGL  + +L EA  +F+
Sbjct: 178 VVTYGILINAHCKSRRYDDAIELFHEMEAKNCKPSPHIYCTLINGLGAEKRLSEALEFFE 237

Query: 133 EMLDSGIRPPGPLF 92
               SG  P  P +
Sbjct: 238 LSKASGFVPEAPTY 251


>ref|XP_004161997.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g71060, mitochondrial-like [Cucumis sativus]
          Length = 542

 Score =  199 bits (505), Expect = 3e-49
 Identities = 91/165 (55%), Positives = 122/165 (73%)
 Frame = -2

Query: 502 GAYCWSERFKDACMVLEEMKKSGVLPNSRTYEIIIHHLIKNRRTKDAYRVFQEMESKFGC 323
           GAYCWS +   A  +++EM+KSGV PNSRTY+II+HHLIK R++K+AY VFQ M  + GC
Sbjct: 373 GAYCWSMKMAYAYRMVDEMRKSGVGPNSRTYDIILHHLIKGRKSKEAYSVFQRMSREPGC 432

Query: 322 EPSANTYEIIVRMFCSEESVDMALQVWNQMKAKGILPSMHMFSSLINGLSRDNKLDEACA 143
           EP+ +TY+I++RMFC+EE VDMA+Q+W++MKAKG+LP MH+FS+LIN L  ++KL++AC 
Sbjct: 433 EPTLSTYDIMIRMFCNEERVDMAIQIWDEMKAKGVLPGMHLFSTLINSLCHEHKLEDACT 492

Query: 142 YFQEMLDSGIRPPGPLFGNXXXXXXXXXXXXXXLSFGLKLDKIRK 8
           YFQEMLD GIRPP  +F N              L    K+ K+RK
Sbjct: 493 YFQEMLDVGIRPPATMFSNLKQALLDDGRKDTALLMAEKIXKLRK 537



 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 42/134 (31%), Positives = 74/134 (55%)
 Frame = -2

Query: 493 CWSERFKDACMVLEEMKKSGVLPNSRTYEIIIHHLIKNRRTKDAYRVFQEMESKFGCEPS 314
           C S   K A  V ++MK     P+ ++Y I++    +++       V++EM  + G EP 
Sbjct: 236 CKSRNVKKAQEVFDKMKHGRFKPDIKSYTILLEGWGQDQNLLKLNEVYREMRDE-GFEPD 294

Query: 313 ANTYEIIVRMFCSEESVDMALQVWNQMKAKGILPSMHMFSSLINGLSRDNKLDEACAYFQ 134
             T+ I++   C     D A++++++M+AK I PS H+F +LINGL  + +L EA  +F+
Sbjct: 295 VVTFGILINAHCKARKYDEAIRLFHEMEAKNIKPSPHVFCTLINGLGSEKRLKEALEFFE 354

Query: 133 EMLDSGIRPPGPLF 92
           ++  SG  P  P +
Sbjct: 355 QLKLSGFAPEAPTY 368



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 34/118 (28%), Positives = 60/118 (50%)
 Frame = -2

Query: 460 VLEEMKKSGVLPNSRTYEIIIHHLIKNRRTKDAYRVFQEMESKFGCEPSANTYEIIVRMF 281
           V  EM+  G  P+  T+ I+I+   K R+  +A R+F EME+K   +PS + +  ++   
Sbjct: 282 VYREMRDEGFEPDVVTFGILINAHCKARKYDEAIRLFHEMEAK-NIKPSPHVFCTLINGL 340

Query: 280 CSEESVDMALQVWNQMKAKGILPSMHMFSSLINGLSRDNKLDEACAYFQEMLDSGIRP 107
            SE+ +  AL+ + Q+K  G  P    +++++       K+  A     EM  SG+ P
Sbjct: 341 GSEKRLKEALEFFEQLKLSGFAPEAPTYNAVVGAYCWSMKMAYAYRMVDEMRKSGVGP 398


>ref|XP_004150483.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
           mitochondrial-like [Cucumis sativus]
          Length = 542

 Score =  199 bits (505), Expect = 3e-49
 Identities = 91/165 (55%), Positives = 122/165 (73%)
 Frame = -2

Query: 502 GAYCWSERFKDACMVLEEMKKSGVLPNSRTYEIIIHHLIKNRRTKDAYRVFQEMESKFGC 323
           GAYCWS +   A  +++EM+KSGV PNSRTY+II+HHLIK R++K+AY VFQ M  + GC
Sbjct: 373 GAYCWSMKMAYAYRMVDEMRKSGVGPNSRTYDIILHHLIKGRKSKEAYSVFQRMSREPGC 432

Query: 322 EPSANTYEIIVRMFCSEESVDMALQVWNQMKAKGILPSMHMFSSLINGLSRDNKLDEACA 143
           EP+ +TY+I++RMFC+EE VDMA+Q+W++MKAKG+LP MH+FS+LIN L  ++KL++AC 
Sbjct: 433 EPTLSTYDIMIRMFCNEERVDMAIQIWDEMKAKGVLPGMHLFSTLINSLCHEHKLEDACT 492

Query: 142 YFQEMLDSGIRPPGPLFGNXXXXXXXXXXXXXXLSFGLKLDKIRK 8
           YFQEMLD GIRPP  +F N              L    K+ K+RK
Sbjct: 493 YFQEMLDVGIRPPATMFSNLKQALLDDGRKDTALLMAEKIKKLRK 537



 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 42/134 (31%), Positives = 74/134 (55%)
 Frame = -2

Query: 493 CWSERFKDACMVLEEMKKSGVLPNSRTYEIIIHHLIKNRRTKDAYRVFQEMESKFGCEPS 314
           C S   K A  V ++MK     P+ ++Y I++    +++       V++EM  + G EP 
Sbjct: 236 CKSRNVKKAQEVFDKMKHGRFKPDIKSYTILLEGWGQDQNLLKLNEVYREMRDE-GFEPD 294

Query: 313 ANTYEIIVRMFCSEESVDMALQVWNQMKAKGILPSMHMFSSLINGLSRDNKLDEACAYFQ 134
             T+ I++   C     D A++++++M+AK I PS H+F +LINGL  + +L EA  +F+
Sbjct: 295 VVTFGILINAHCKARKYDEAIRLFHEMEAKNIKPSPHVFCTLINGLGSEKRLKEALEFFE 354

Query: 133 EMLDSGIRPPGPLF 92
           ++  SG  P  P +
Sbjct: 355 QLKLSGFAPEAPTY 368



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 34/118 (28%), Positives = 60/118 (50%)
 Frame = -2

Query: 460 VLEEMKKSGVLPNSRTYEIIIHHLIKNRRTKDAYRVFQEMESKFGCEPSANTYEIIVRMF 281
           V  EM+  G  P+  T+ I+I+   K R+  +A R+F EME+K   +PS + +  ++   
Sbjct: 282 VYREMRDEGFEPDVVTFGILINAHCKARKYDEAIRLFHEMEAK-NIKPSPHVFCTLINGL 340

Query: 280 CSEESVDMALQVWNQMKAKGILPSMHMFSSLINGLSRDNKLDEACAYFQEMLDSGIRP 107
            SE+ +  AL+ + Q+K  G  P    +++++       K+  A     EM  SG+ P
Sbjct: 341 GSEKRLKEALEFFEQLKLSGFAPEAPTYNAVVGAYCWSMKMAYAYRMVDEMRKSGVGP 398