BLASTX nr result

ID: Coptis24_contig00029333 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029333
         (353 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26657.3| unnamed protein product [Vitis vinifera]              150   1e-34
ref|XP_002279440.1| PREDICTED: mutS protein homolog 5-like [Viti...   150   1e-34
ref|XP_003617575.1| DNA mismatch repair protein mutS [Medicago t...   147   9e-34
ref|XP_003545125.1| PREDICTED: mutS protein homolog 5-like [Glyc...   144   6e-33
ref|XP_002529913.1| conserved hypothetical protein [Ricinus comm...   140   1e-31

>emb|CBI26657.3| unnamed protein product [Vitis vinifera]
          Length = 793

 Score =  150 bits (378), Expect = 1e-34
 Identities = 75/87 (86%), Positives = 82/87 (94%)
 Frame = +3

Query: 3   FLNSMMDVGSDVQVRASGGLLAILQTERLVDTLEQTEGGNASITIDCVTEISLNNFLKLD 182
           FL+SMMD+GSD+QVRASGGLLAIL+ ER+VDTLEQ E GNASITID VTEISL+ FLKLD
Sbjct: 113 FLSSMMDIGSDIQVRASGGLLAILENERIVDTLEQKECGNASITIDFVTEISLHKFLKLD 172

Query: 183 AAAHESLQIFQIDKHPSHMGIGRAKEG 263
           AAAHE+LQIFQIDKHPSHMGIGRAKEG
Sbjct: 173 AAAHEALQIFQIDKHPSHMGIGRAKEG 199


>ref|XP_002279440.1| PREDICTED: mutS protein homolog 5-like [Vitis vinifera]
          Length = 807

 Score =  150 bits (378), Expect = 1e-34
 Identities = 75/87 (86%), Positives = 82/87 (94%)
 Frame = +3

Query: 3   FLNSMMDVGSDVQVRASGGLLAILQTERLVDTLEQTEGGNASITIDCVTEISLNNFLKLD 182
           FL+SMMD+GSD+QVRASGGLLAIL+ ER+VDTLEQ E GNASITID VTEISL+ FLKLD
Sbjct: 127 FLSSMMDIGSDIQVRASGGLLAILENERIVDTLEQKECGNASITIDFVTEISLHKFLKLD 186

Query: 183 AAAHESLQIFQIDKHPSHMGIGRAKEG 263
           AAAHE+LQIFQIDKHPSHMGIGRAKEG
Sbjct: 187 AAAHEALQIFQIDKHPSHMGIGRAKEG 213


>ref|XP_003617575.1| DNA mismatch repair protein mutS [Medicago truncatula]
           gi|355518910|gb|AET00534.1| DNA mismatch repair protein
           mutS [Medicago truncatula]
          Length = 488

 Score =  147 bits (371), Expect = 9e-34
 Identities = 72/87 (82%), Positives = 81/87 (93%)
 Frame = +3

Query: 3   FLNSMMDVGSDVQVRASGGLLAILQTERLVDTLEQTEGGNASITIDCVTEISLNNFLKLD 182
           FL+SMMD+GS+VQVRASGGLLAIL+ ER+VDTLEQ E GN SITID + EISLNNF+KLD
Sbjct: 129 FLSSMMDMGSEVQVRASGGLLAILENERIVDTLEQKESGNTSITIDSLAEISLNNFIKLD 188

Query: 183 AAAHESLQIFQIDKHPSHMGIGRAKEG 263
           AA+HE+LQIFQIDKHPSHMGIGRAKEG
Sbjct: 189 AASHEALQIFQIDKHPSHMGIGRAKEG 215


>ref|XP_003545125.1| PREDICTED: mutS protein homolog 5-like [Glycine max]
          Length = 882

 Score =  144 bits (364), Expect = 6e-33
 Identities = 71/87 (81%), Positives = 80/87 (91%)
 Frame = +3

Query: 3   FLNSMMDVGSDVQVRASGGLLAILQTERLVDTLEQTEGGNASITIDCVTEISLNNFLKLD 182
           +L+SMM++GS+VQVRASGGLLAIL+ ER+VDTLEQ E GN SITID + EISLNNFLKLD
Sbjct: 127 YLSSMMNMGSEVQVRASGGLLAILENERIVDTLEQKESGNTSITIDSLAEISLNNFLKLD 186

Query: 183 AAAHESLQIFQIDKHPSHMGIGRAKEG 263
            AAHE+LQIFQIDKHPSHMGIGRAKEG
Sbjct: 187 TAAHEALQIFQIDKHPSHMGIGRAKEG 213


>ref|XP_002529913.1| conserved hypothetical protein [Ricinus communis]
           gi|223530590|gb|EEF32467.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 351

 Score =  140 bits (352), Expect = 1e-31
 Identities = 69/87 (79%), Positives = 79/87 (90%)
 Frame = +3

Query: 3   FLNSMMDVGSDVQVRASGGLLAILQTERLVDTLEQTEGGNASITIDCVTEISLNNFLKLD 182
           +L+SMMD+GS++QVRASGGLLAIL+ ER+VDTL Q E G A+ITID V EISLN FLKLD
Sbjct: 124 YLSSMMDMGSEIQVRASGGLLAILENERIVDTLAQKECGTAAITIDSVVEISLNKFLKLD 183

Query: 183 AAAHESLQIFQIDKHPSHMGIGRAKEG 263
           AAAHE+LQIFQIDKHPSHMGIGR+KEG
Sbjct: 184 AAAHEALQIFQIDKHPSHMGIGRSKEG 210


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