BLASTX nr result
ID: Coptis24_contig00029333
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00029333 (353 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI26657.3| unnamed protein product [Vitis vinifera] 150 1e-34 ref|XP_002279440.1| PREDICTED: mutS protein homolog 5-like [Viti... 150 1e-34 ref|XP_003617575.1| DNA mismatch repair protein mutS [Medicago t... 147 9e-34 ref|XP_003545125.1| PREDICTED: mutS protein homolog 5-like [Glyc... 144 6e-33 ref|XP_002529913.1| conserved hypothetical protein [Ricinus comm... 140 1e-31 >emb|CBI26657.3| unnamed protein product [Vitis vinifera] Length = 793 Score = 150 bits (378), Expect = 1e-34 Identities = 75/87 (86%), Positives = 82/87 (94%) Frame = +3 Query: 3 FLNSMMDVGSDVQVRASGGLLAILQTERLVDTLEQTEGGNASITIDCVTEISLNNFLKLD 182 FL+SMMD+GSD+QVRASGGLLAIL+ ER+VDTLEQ E GNASITID VTEISL+ FLKLD Sbjct: 113 FLSSMMDIGSDIQVRASGGLLAILENERIVDTLEQKECGNASITIDFVTEISLHKFLKLD 172 Query: 183 AAAHESLQIFQIDKHPSHMGIGRAKEG 263 AAAHE+LQIFQIDKHPSHMGIGRAKEG Sbjct: 173 AAAHEALQIFQIDKHPSHMGIGRAKEG 199 >ref|XP_002279440.1| PREDICTED: mutS protein homolog 5-like [Vitis vinifera] Length = 807 Score = 150 bits (378), Expect = 1e-34 Identities = 75/87 (86%), Positives = 82/87 (94%) Frame = +3 Query: 3 FLNSMMDVGSDVQVRASGGLLAILQTERLVDTLEQTEGGNASITIDCVTEISLNNFLKLD 182 FL+SMMD+GSD+QVRASGGLLAIL+ ER+VDTLEQ E GNASITID VTEISL+ FLKLD Sbjct: 127 FLSSMMDIGSDIQVRASGGLLAILENERIVDTLEQKECGNASITIDFVTEISLHKFLKLD 186 Query: 183 AAAHESLQIFQIDKHPSHMGIGRAKEG 263 AAAHE+LQIFQIDKHPSHMGIGRAKEG Sbjct: 187 AAAHEALQIFQIDKHPSHMGIGRAKEG 213 >ref|XP_003617575.1| DNA mismatch repair protein mutS [Medicago truncatula] gi|355518910|gb|AET00534.1| DNA mismatch repair protein mutS [Medicago truncatula] Length = 488 Score = 147 bits (371), Expect = 9e-34 Identities = 72/87 (82%), Positives = 81/87 (93%) Frame = +3 Query: 3 FLNSMMDVGSDVQVRASGGLLAILQTERLVDTLEQTEGGNASITIDCVTEISLNNFLKLD 182 FL+SMMD+GS+VQVRASGGLLAIL+ ER+VDTLEQ E GN SITID + EISLNNF+KLD Sbjct: 129 FLSSMMDMGSEVQVRASGGLLAILENERIVDTLEQKESGNTSITIDSLAEISLNNFIKLD 188 Query: 183 AAAHESLQIFQIDKHPSHMGIGRAKEG 263 AA+HE+LQIFQIDKHPSHMGIGRAKEG Sbjct: 189 AASHEALQIFQIDKHPSHMGIGRAKEG 215 >ref|XP_003545125.1| PREDICTED: mutS protein homolog 5-like [Glycine max] Length = 882 Score = 144 bits (364), Expect = 6e-33 Identities = 71/87 (81%), Positives = 80/87 (91%) Frame = +3 Query: 3 FLNSMMDVGSDVQVRASGGLLAILQTERLVDTLEQTEGGNASITIDCVTEISLNNFLKLD 182 +L+SMM++GS+VQVRASGGLLAIL+ ER+VDTLEQ E GN SITID + EISLNNFLKLD Sbjct: 127 YLSSMMNMGSEVQVRASGGLLAILENERIVDTLEQKESGNTSITIDSLAEISLNNFLKLD 186 Query: 183 AAAHESLQIFQIDKHPSHMGIGRAKEG 263 AAHE+LQIFQIDKHPSHMGIGRAKEG Sbjct: 187 TAAHEALQIFQIDKHPSHMGIGRAKEG 213 >ref|XP_002529913.1| conserved hypothetical protein [Ricinus communis] gi|223530590|gb|EEF32467.1| conserved hypothetical protein [Ricinus communis] Length = 351 Score = 140 bits (352), Expect = 1e-31 Identities = 69/87 (79%), Positives = 79/87 (90%) Frame = +3 Query: 3 FLNSMMDVGSDVQVRASGGLLAILQTERLVDTLEQTEGGNASITIDCVTEISLNNFLKLD 182 +L+SMMD+GS++QVRASGGLLAIL+ ER+VDTL Q E G A+ITID V EISLN FLKLD Sbjct: 124 YLSSMMDMGSEIQVRASGGLLAILENERIVDTLAQKECGTAAITIDSVVEISLNKFLKLD 183 Query: 183 AAAHESLQIFQIDKHPSHMGIGRAKEG 263 AAAHE+LQIFQIDKHPSHMGIGR+KEG Sbjct: 184 AAAHEALQIFQIDKHPSHMGIGRSKEG 210