BLASTX nr result

ID: Coptis24_contig00029318 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029318
         (407 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519046.1| conserved hypothetical protein [Ricinus comm...   198   4e-49
ref|NP_193903.1| uncharacterized protein [Arabidopsis thaliana] ...   195   3e-48
ref|XP_004134711.1| PREDICTED: uncharacterized protein LOC101206...   193   1e-47
ref|XP_002869869.1| hypothetical protein ARALYDRAFT_914489 [Arab...   193   1e-47
ref|NP_001054285.1| Os04g0680300 [Oryza sativa Japonica Group] g...   192   2e-47

>ref|XP_002519046.1| conserved hypothetical protein [Ricinus communis]
           gi|223541709|gb|EEF43257.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 138

 Score =  198 bits (503), Expect = 4e-49
 Identities = 87/126 (69%), Positives = 98/126 (77%), Gaps = 1/126 (0%)
 Frame = -1

Query: 383 MLPQKWTPPCGSKCTNKYSALTQIPWRVFCKKGCDTDVRTWEECLGECDEKCYKDPVFKD 204
           MLP +WTPPCGS+CT+KY+ALTQIPWRVFCKKGCD D  TWEECL EC+E CYKDPVFKD
Sbjct: 1   MLPHQWTPPCGSQCTHKYAALTQIPWRVFCKKGCDADGETWEECLSECNEICYKDPVFKD 60

Query: 203 HQWSAYIDRSPGADSYSVECFRACVTGCGYKFDISKEEVERVHPKRPPK-PCIEKKQPPP 27
            QWSAYIDRSPGA  YS ECF ACV GCGY+F+I  E+V+++ P RP K P     Q PP
Sbjct: 61  QQWSAYIDRSPGAARYSEECFHACVAGCGYRFEIEAEKVDQIRPNRPCKLPPPPPAQKPP 120

Query: 26  QVEQMP 9
            V   P
Sbjct: 121 PVATKP 126


>ref|NP_193903.1| uncharacterized protein [Arabidopsis thaliana]
           gi|4455280|emb|CAB36816.1| putative protein [Arabidopsis
           thaliana] gi|7268969|emb|CAB81279.1| putative protein
           [Arabidopsis thaliana] gi|37202020|gb|AAQ89625.1|
           At4g21720 [Arabidopsis thaliana]
           gi|51968588|dbj|BAD42986.1| putative protein
           [Arabidopsis thaliana] gi|332659094|gb|AEE84494.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 139

 Score =  195 bits (496), Expect = 3e-48
 Identities = 81/119 (68%), Positives = 93/119 (78%)
 Frame = -1

Query: 383 MLPQKWTPPCGSKCTNKYSALTQIPWRVFCKKGCDTDVRTWEECLGECDEKCYKDPVFKD 204
           M+PQ+WTPPCGSKCTNKYSA TQ+PWRVFCKKGCD D  +WE+C+G+C E CYKDPV KD
Sbjct: 1   MIPQQWTPPCGSKCTNKYSAFTQLPWRVFCKKGCDADSDSWEDCVGDCSEICYKDPVLKD 60

Query: 203 HQWSAYIDRSPGADSYSVECFRACVTGCGYKFDISKEEVERVHPKRPPKPCIEKKQPPP 27
             W+A IDRSPG   YS ECF ACV GCGYKFD+  E V +V PKRPP P  + + PPP
Sbjct: 61  RPWTAVIDRSPGDAKYSEECFHACVAGCGYKFDVEAEIVNKVKPKRPPPPPPKPQPPPP 119


>ref|XP_004134711.1| PREDICTED: uncharacterized protein LOC101206260 isoform 2 [Cucumis
           sativus] gi|449433855|ref|XP_004134712.1| PREDICTED:
           uncharacterized protein LOC101206260 isoform 3 [Cucumis
           sativus] gi|449521307|ref|XP_004167671.1| PREDICTED:
           uncharacterized LOC101206260 isoform 2 [Cucumis sativus]
           gi|449521309|ref|XP_004167672.1| PREDICTED:
           uncharacterized LOC101206260 isoform 3 [Cucumis sativus]
          Length = 139

 Score =  193 bits (491), Expect = 1e-47
 Identities = 79/125 (63%), Positives = 97/125 (77%), Gaps = 2/125 (1%)
 Frame = -1

Query: 383 MLPQKWTPPCGSKCTNKYSALTQIPWRVFCKKGCDTDVRTWEECLGECDEKCYKDPVFKD 204
           M+PQ+W  PCG++CT KY+ALTQIPWRVFCKKGCD D   W+ECL EC E CYKDPVFKD
Sbjct: 2   MIPQQWASPCGNQCTQKYAALTQIPWRVFCKKGCDADGEAWDECLEECTEICYKDPVFKD 61

Query: 203 HQWSAYIDRSPGADSYSVECFRACVTGCGYKFDISKEEVERVHPKRP--PKPCIEKKQPP 30
           HQWSAYIDRSPG+ SYS ECF ACV+GCG+KF++  E+ +++ P RP  P P + K  P 
Sbjct: 62  HQWSAYIDRSPGSASYSEECFHACVSGCGFKFEVEPEKADKIQPNRPAKPAPVVSKPSPR 121

Query: 29  PQVEQ 15
           P + +
Sbjct: 122 PPITE 126


>ref|XP_002869869.1| hypothetical protein ARALYDRAFT_914489 [Arabidopsis lyrata subsp.
           lyrata] gi|297315705|gb|EFH46128.1| hypothetical protein
           ARALYDRAFT_914489 [Arabidopsis lyrata subsp. lyrata]
          Length = 139

 Score =  193 bits (491), Expect = 1e-47
 Identities = 80/119 (67%), Positives = 93/119 (78%)
 Frame = -1

Query: 383 MLPQKWTPPCGSKCTNKYSALTQIPWRVFCKKGCDTDVRTWEECLGECDEKCYKDPVFKD 204
           M+PQ+WTPPCGSKCT+KYSA TQ+PWRVFCKKGCD D  +WE+C+G+C E CYKDPV KD
Sbjct: 1   MIPQQWTPPCGSKCTHKYSAFTQLPWRVFCKKGCDADSDSWEDCVGDCSEICYKDPVLKD 60

Query: 203 HQWSAYIDRSPGADSYSVECFRACVTGCGYKFDISKEEVERVHPKRPPKPCIEKKQPPP 27
             W+A IDRSPG   YS ECF ACV GCGYKFD+  E V +V PKRPP P  + + PPP
Sbjct: 61  RPWTAVIDRSPGDAKYSEECFHACVAGCGYKFDVEAEIVNKVKPKRPPPPPPKPQPPPP 119


>ref|NP_001054285.1| Os04g0680300 [Oryza sativa Japonica Group]
           gi|32487404|emb|CAE05738.1| OSJNBb0017I01.18 [Oryza
           sativa Japonica Group] gi|113565856|dbj|BAF16199.1|
           Os04g0680300 [Oryza sativa Japonica Group]
           gi|215768076|dbj|BAH00305.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218195834|gb|EEC78261.1| hypothetical protein
           OsI_17947 [Oryza sativa Indica Group]
           gi|222629782|gb|EEE61914.1| hypothetical protein
           OsJ_16647 [Oryza sativa Japonica Group]
          Length = 138

 Score =  192 bits (489), Expect = 2e-47
 Identities = 82/123 (66%), Positives = 96/123 (78%)
 Frame = -1

Query: 383 MLPQKWTPPCGSKCTNKYSALTQIPWRVFCKKGCDTDVRTWEECLGECDEKCYKDPVFKD 204
           M   +WTPPCGS CT KY++L QIPWRVFCKKGCD D  TW+EC+ +C E CYKDPV +D
Sbjct: 1   MFSGEWTPPCGSCCTKKYASLVQIPWRVFCKKGCDADGDTWDECISKCTEICYKDPVLED 60

Query: 203 HQWSAYIDRSPGADSYSVECFRACVTGCGYKFDISKEEVERVHPKRPPKPCIEKKQPPPQ 24
           HQWSAYIDRSPG DSYS+ECF ACV+GCGY+FDI  E+VE++ P RP KP      PPP 
Sbjct: 61  HQWSAYIDRSPGQDSYSLECFNACVSGCGYRFDIPAEKVEQIKPNRPSKP---PPPPPPA 117

Query: 23  VEQ 15
           VE+
Sbjct: 118 VER 120


Top