BLASTX nr result

ID: Coptis24_contig00029298 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029298
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267603.1| PREDICTED: uncharacterized protein LOC100247...    80   2e-13
ref|XP_003562177.1| PREDICTED: uncharacterized protein LOC100843...    70   2e-10
ref|XP_002327566.1| predicted protein [Populus trichocarpa] gi|2...    69   4e-10
ref|XP_003537431.1| PREDICTED: uncharacterized protein LOC100809...    68   9e-10
gb|EEE58228.1| hypothetical protein OsJ_09201 [Oryza sativa Japo...    67   2e-09

>ref|XP_002267603.1| PREDICTED: uncharacterized protein LOC100247879 [Vitis vinifera]
           gi|297738139|emb|CBI27340.3| unnamed protein product
           [Vitis vinifera]
          Length = 407

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 36/49 (73%), Positives = 43/49 (87%)
 Frame = -3

Query: 338 LIEAFFPTGNYSTTYLRNLAKEEGVISIDPQKCDRDSSTAMQPTKIDCQ 192
           L+EA FPTG+Y+TTYLRNLAKEEGVI+I  + CDRDSSTAM+PT + CQ
Sbjct: 358 LVEALFPTGSYTTTYLRNLAKEEGVINIKSEMCDRDSSTAMEPTILACQ 406


>ref|XP_003562177.1| PREDICTED: uncharacterized protein LOC100843630 [Brachypodium
           distachyon]
          Length = 415

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 31/49 (63%), Positives = 36/49 (73%)
 Frame = -3

Query: 338 LIEAFFPTGNYSTTYLRNLAKEEGVISIDPQKCDRDSSTAMQPTKIDCQ 192
           L+E FFPTGNY+T Y RNLAKEEGV  I P+ C R  ST M+PT + CQ
Sbjct: 367 LVEVFFPTGNYTTVYFRNLAKEEGVTEIGPEICGRSISTPMEPTILPCQ 415


>ref|XP_002327566.1| predicted protein [Populus trichocarpa] gi|222836120|gb|EEE74541.1|
           predicted protein [Populus trichocarpa]
          Length = 379

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 30/48 (62%), Positives = 36/48 (75%)
 Frame = -3

Query: 338 LIEAFFPTGNYSTTYLRNLAKEEGVISIDPQKCDRDSSTAMQPTKIDC 195
           LIE  FP GNYSTTY RN+AK EGV+SID   C+RD ST ++PT + C
Sbjct: 332 LIEVLFPDGNYSTTYFRNIAKGEGVVSIDANMCERDISTPLEPTILSC 379


>ref|XP_003537431.1| PREDICTED: uncharacterized protein LOC100809133 [Glycine max]
          Length = 409

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 30/48 (62%), Positives = 37/48 (77%)
 Frame = -3

Query: 338 LIEAFFPTGNYSTTYLRNLAKEEGVISIDPQKCDRDSSTAMQPTKIDC 195
           LIE  FPTGNY+ TY RN+AK E  I+I P+ CDRD+STAM+PT + C
Sbjct: 361 LIEVLFPTGNYTMTYFRNIAKGEVPINIGPEMCDRDTSTAMEPTIVAC 408


>gb|EEE58228.1| hypothetical protein OsJ_09201 [Oryza sativa Japonica Group]
          Length = 416

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 29/49 (59%), Positives = 35/49 (71%)
 Frame = -3

Query: 338 LIEAFFPTGNYSTTYLRNLAKEEGVISIDPQKCDRDSSTAMQPTKIDCQ 192
           LIE FFPTGNY+T Y RNL K+EGV  + P+ C R  ST M+PT + CQ
Sbjct: 368 LIEIFFPTGNYTTIYFRNLMKDEGVTEVVPEMCSRSISTPMEPTILPCQ 416


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