BLASTX nr result

ID: Coptis24_contig00029286 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029286
         (899 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300452.1| predicted protein [Populus trichocarpa] gi|2...   254   2e-65
ref|XP_002336132.1| predicted protein [Populus trichocarpa] gi|2...   251   2e-64
dbj|BAC42883.1| unknown protein [Arabidopsis thaliana]                250   4e-64
ref|NP_177014.1| Exostosin family protein [Arabidopsis thaliana]...   248   1e-63
ref|XP_002888666.1| exostosin family protein [Arabidopsis lyrata...   245   9e-63

>ref|XP_002300452.1| predicted protein [Populus trichocarpa] gi|222847710|gb|EEE85257.1|
           predicted protein [Populus trichocarpa]
          Length = 400

 Score =  254 bits (648), Expect = 2e-65
 Identities = 128/196 (65%), Positives = 150/196 (76%), Gaps = 9/196 (4%)
 Frame = -3

Query: 897 SLELVRWQDKMRRAERPHLFSFVGAPRTGVQKAAIRDEILRQCSSSQECYLLKCERGASK 718
           S E++ WQ+KMR++ RPHLFSF+G PR GV+KAA+RDE++RQCS S  C LLKC +G SK
Sbjct: 198 SHEMMTWQNKMRQSSRPHLFSFIGGPRRGVEKAAVRDELIRQCSESGRCKLLKCGKGPSK 257

Query: 717 CHNPSDVLKVMTKSQFCLQAPGDSFTRRSTFDSVLAGCIPVFFSSHTAYTQYAWYLPQ-E 541
           CH+P +VLKVM++SQFCLQAPGDSFTRRSTFDSVLAGCIPVFFS HT YTQY W+ P  +
Sbjct: 258 CHDPIEVLKVMSQSQFCLQAPGDSFTRRSTFDSVLAGCIPVFFSPHTVYTQYEWFFPAGD 317

Query: 540 KSEYSVYFPE--------EDRGAIIEEALRKIPKEKVEKMRSTVISLIPRLTYMHPNATT 385
             EYSVY  E          R   IEE L KI +EKVE+MRS VI+L+PRLTY HPNAT 
Sbjct: 318 AREYSVYIDENALKTGNGSKRVVSIEEELFKIEREKVERMRSAVINLMPRLTYAHPNATD 377

Query: 384 THFQFKDAVDIALEQL 337
             FQ  DAVD+ALE L
Sbjct: 378 LGFQ--DAVDVALEAL 391


>ref|XP_002336132.1| predicted protein [Populus trichocarpa] gi|222873674|gb|EEF10805.1|
           predicted protein [Populus trichocarpa]
          Length = 421

 Score =  251 bits (641), Expect = 2e-64
 Identities = 127/196 (64%), Positives = 149/196 (76%), Gaps = 9/196 (4%)
 Frame = -3

Query: 897 SLELVRWQDKMRRAERPHLFSFVGAPRTGVQKAAIRDEILRQCSSSQECYLLKCERGASK 718
           S E++ WQ+KMR++ RPHLFSF+G PR GV+KAA+RDE++RQCS S  C LLKC +G SK
Sbjct: 219 SHEMMTWQNKMRQSSRPHLFSFIGGPRRGVEKAAVRDELIRQCSESGRCKLLKCGKGPSK 278

Query: 717 CHNPSDVLKVMTKSQFCLQAPGDSFTRRSTFDSVLAGCIPVFFSSHTAYTQYAWYLPQ-E 541
           CH P +VLKVM++SQFCLQAPGDSFTRRSTFDSVLAGCIPVFFS HT YTQY W+ P  +
Sbjct: 279 CHYPIEVLKVMSQSQFCLQAPGDSFTRRSTFDSVLAGCIPVFFSPHTVYTQYEWFFPAGD 338

Query: 540 KSEYSVYFPE--------EDRGAIIEEALRKIPKEKVEKMRSTVISLIPRLTYMHPNATT 385
             EYSVY  E          R   IEE L KI +E+VE+MRS VI+L+PRLTY HPNAT 
Sbjct: 339 AREYSVYIDENALKTGNGSKRVVSIEEELFKIEREQVERMRSAVINLMPRLTYAHPNATD 398

Query: 384 THFQFKDAVDIALEQL 337
             FQ  DAVD+ALE L
Sbjct: 399 LGFQ--DAVDVALEAL 412


>dbj|BAC42883.1| unknown protein [Arabidopsis thaliana]
          Length = 455

 Score =  250 bits (638), Expect = 4e-64
 Identities = 121/189 (64%), Positives = 146/189 (77%)
 Frame = -3

Query: 897 SLELVRWQDKMRRAERPHLFSFVGAPRTGVQKAAIRDEILRQCSSSQECYLLKCERGASK 718
           S E+V WQDKM+  ERP+LFSFVG PR G++KAAIRDE+++QC+ S  C LLKCE G S+
Sbjct: 260 SAEMVTWQDKMKNVERPNLFSFVGGPRKGLEKAAIRDELIKQCAESSHCELLKCENGGSR 319

Query: 717 CHNPSDVLKVMTKSQFCLQAPGDSFTRRSTFDSVLAGCIPVFFSSHTAYTQYAWYLPQEK 538
           CHNP  VL VM +S+FCLQAPGDSFTRRSTFD++LAGCIPVFFS HT YTQY WYLP +K
Sbjct: 320 CHNPMTVLGVMARSRFCLQAPGDSFTRRSTFDAMLAGCIPVFFSPHTMYTQYMWYLPDDK 379

Query: 537 SEYSVYFPEEDRGAIIEEALRKIPKEKVEKMRSTVISLIPRLTYMHPNATTTHFQFKDAV 358
             YSV F +E   A IE+ L +I + +V +MR  VI LIPRLTY HPN  +T++   DAV
Sbjct: 380 RSYSV-FMDEKNNAHIEQELLRISENEVVQMREIVIDLIPRLTYAHPN--STNYDLPDAV 436

Query: 357 DIALEQLSK 331
           DIALE L+K
Sbjct: 437 DIALEALAK 445


>ref|NP_177014.1| Exostosin family protein [Arabidopsis thaliana]
           gi|12324886|gb|AAG52396.1|AC011915_10 hypothetical
           protein; 19613-17891 [Arabidopsis thaliana]
           gi|332196676|gb|AEE34797.1| Exostosin family protein
           [Arabidopsis thaliana]
          Length = 455

 Score =  248 bits (634), Expect = 1e-63
 Identities = 120/189 (63%), Positives = 145/189 (76%)
 Frame = -3

Query: 897 SLELVRWQDKMRRAERPHLFSFVGAPRTGVQKAAIRDEILRQCSSSQECYLLKCERGASK 718
           S E+V WQDKM+  ERP+LFSFVG PR G++KAAIRDE+++QC+ S  C LLKCE G S+
Sbjct: 260 SAEMVTWQDKMKNVERPNLFSFVGGPRKGLEKAAIRDELIKQCAESSHCELLKCENGGSR 319

Query: 717 CHNPSDVLKVMTKSQFCLQAPGDSFTRRSTFDSVLAGCIPVFFSSHTAYTQYAWYLPQEK 538
           CHNP  VL VM +S+FCLQAPGDSFTRRSTFD++LAGCIPVFFS HT YTQY WYLP +K
Sbjct: 320 CHNPMTVLGVMARSRFCLQAPGDSFTRRSTFDAMLAGCIPVFFSPHTMYTQYMWYLPDDK 379

Query: 537 SEYSVYFPEEDRGAIIEEALRKIPKEKVEKMRSTVISLIPRLTYMHPNATTTHFQFKDAV 358
             YSV F +E     IE+ L +I + +V +MR  VI LIPRLTY HPN  +T++   DAV
Sbjct: 380 RSYSV-FMDEKNNTHIEQELLRISENEVVQMREIVIDLIPRLTYAHPN--STNYDLPDAV 436

Query: 357 DIALEQLSK 331
           DIALE L+K
Sbjct: 437 DIALEALAK 445


>ref|XP_002888666.1| exostosin family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297334507|gb|EFH64925.1| exostosin family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 457

 Score =  245 bits (626), Expect = 9e-63
 Identities = 117/189 (61%), Positives = 146/189 (77%)
 Frame = -3

Query: 897 SLELVRWQDKMRRAERPHLFSFVGAPRTGVQKAAIRDEILRQCSSSQECYLLKCERGASK 718
           S E+V WQDKMRR +RP+LFSFVG PR G++KAAIRD++++QC+ S  C LLKCE G S+
Sbjct: 262 SAEMVTWQDKMRRVDRPNLFSFVGGPRKGLEKAAIRDKLIKQCAESSHCELLKCENGGSR 321

Query: 717 CHNPSDVLKVMTKSQFCLQAPGDSFTRRSTFDSVLAGCIPVFFSSHTAYTQYAWYLPQEK 538
           CH+P  VL VM +S+FCLQAPGDS+TRRSTFD++LAGCIPVFFS HT YTQY WYLP +K
Sbjct: 322 CHDPMTVLGVMARSRFCLQAPGDSYTRRSTFDAMLAGCIPVFFSPHTMYTQYLWYLPDDK 381

Query: 537 SEYSVYFPEEDRGAIIEEALRKIPKEKVEKMRSTVISLIPRLTYMHPNATTTHFQFKDAV 358
             YSV F +E     IE+ L +I + +V +MR TVI LIP +TY HPNA  T++   DAV
Sbjct: 382 RSYSV-FMDEKNNTHIEQELLRISESEVVQMRETVIDLIPSVTYAHPNA--TNYDLPDAV 438

Query: 357 DIALEQLSK 331
           D+ALE L+K
Sbjct: 439 DVALEALAK 447


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