BLASTX nr result

ID: Coptis24_contig00029284 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029284
         (331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271877.1| PREDICTED: UPF0392 protein RCOM_0530710-like...   141   5e-32
emb|CBI32066.3| unnamed protein product [Vitis vinifera]              140   8e-32
ref|XP_004168836.1| PREDICTED: UPF0392 protein RCOM_0530710-like...   130   1e-28
ref|XP_004135216.1| PREDICTED: UPF0392 protein RCOM_0530710-like...   130   1e-28
ref|XP_003517750.1| PREDICTED: UPF0392 protein RCOM_0530710-like...   128   6e-28

>ref|XP_002271877.1| PREDICTED: UPF0392 protein RCOM_0530710-like [Vitis vinifera]
          Length = 601

 Score =  141 bits (356), Expect = 5e-32
 Identities = 68/113 (60%), Positives = 76/113 (67%), Gaps = 29/113 (25%)
 Frame = -3

Query: 329 TLLNVVHHFHLRSGY-----------------------------RVATYVTDWKENQNEG 237
           TLLNVVHHF LR G+                             RVATYV DW+E +NEG
Sbjct: 489 TLLNVVHHFRLRKGFKYLNLPQSTGVINHYKYQVWEAFRAKFFRRVATYVADWQEKENEG 548

Query: 236 SKDRAPGLGTEAIEPPNWPLQFCEVWDTGLRDFIISNLADPITGMLPWEVPLI 78
           SKDRAPGLGTEAIEPP WPLQFCEVWDTGLRDF+++NLADP TG+LPWE  L+
Sbjct: 549 SKDRAPGLGTEAIEPPKWPLQFCEVWDTGLRDFVLANLADPTTGLLPWERSLL 601


>emb|CBI32066.3| unnamed protein product [Vitis vinifera]
          Length = 521

 Score =  140 bits (354), Expect = 8e-32
 Identities = 67/109 (61%), Positives = 74/109 (67%), Gaps = 29/109 (26%)
 Frame = -3

Query: 329 TLLNVVHHFHLRSGY-----------------------------RVATYVTDWKENQNEG 237
           TLLNVVHHF LR G+                             RVATYV DW+E +NEG
Sbjct: 404 TLLNVVHHFRLRKGFKYLNLPQSTGVINHYKYQVWEAFRAKFFRRVATYVADWQEKENEG 463

Query: 236 SKDRAPGLGTEAIEPPNWPLQFCEVWDTGLRDFIISNLADPITGMLPWE 90
           SKDRAPGLGTEAIEPP WPLQFCEVWDTGLRDF+++NLADP TG+LPWE
Sbjct: 464 SKDRAPGLGTEAIEPPKWPLQFCEVWDTGLRDFVLANLADPTTGLLPWE 512


>ref|XP_004168836.1| PREDICTED: UPF0392 protein RCOM_0530710-like [Cucumis sativus]
          Length = 598

 Score =  130 bits (326), Expect = 1e-28
 Identities = 63/109 (57%), Positives = 71/109 (65%), Gaps = 29/109 (26%)
 Frame = -3

Query: 329 TLLNVVHHFHLRSGY-----------------------------RVATYVTDWKENQNEG 237
           TLLN+VHHF L+ G+                             RVATYV DW+E QNEG
Sbjct: 486 TLLNIVHHFRLKRGFGFFDVPKSNAVINHYKYQVWETFRAKFFRRVATYVVDWQEAQNEG 545

Query: 236 SKDRAPGLGTEAIEPPNWPLQFCEVWDTGLRDFIISNLADPITGMLPWE 90
           SKDRAPGLGTEAIEPPNW LQFCEVWDTGLRDF+ +  +DP+TG LPWE
Sbjct: 546 SKDRAPGLGTEAIEPPNWRLQFCEVWDTGLRDFVQTLFSDPLTGYLPWE 594


>ref|XP_004135216.1| PREDICTED: UPF0392 protein RCOM_0530710-like [Cucumis sativus]
          Length = 598

 Score =  130 bits (326), Expect = 1e-28
 Identities = 63/109 (57%), Positives = 71/109 (65%), Gaps = 29/109 (26%)
 Frame = -3

Query: 329 TLLNVVHHFHLRSGY-----------------------------RVATYVTDWKENQNEG 237
           TLLN+VHHF L+ G+                             RVATYV DW+E QNEG
Sbjct: 486 TLLNIVHHFRLKRGFGFFDVPKSNAVINHYKYQVWETFRAKFFRRVATYVVDWQEAQNEG 545

Query: 236 SKDRAPGLGTEAIEPPNWPLQFCEVWDTGLRDFIISNLADPITGMLPWE 90
           SKDRAPGLGTEAIEPPNW LQFCEVWDTGLRDF+ +  +DP+TG LPWE
Sbjct: 546 SKDRAPGLGTEAIEPPNWRLQFCEVWDTGLRDFVQTLFSDPLTGYLPWE 594


>ref|XP_003517750.1| PREDICTED: UPF0392 protein RCOM_0530710-like [Glycine max]
          Length = 605

 Score =  128 bits (321), Expect = 6e-28
 Identities = 61/109 (55%), Positives = 72/109 (66%), Gaps = 29/109 (26%)
 Frame = -3

Query: 329 TLLNVVHHFHLRSGYR-----------------------------VATYVTDWKENQNEG 237
           +LLNVVHHF LR G+R                             VATYV DW+E+QN+G
Sbjct: 493 SLLNVVHHFQLRVGFRYHNMPEGTAIVNHYKYQVWETFKAKFFRRVATYVVDWQEDQNKG 552

Query: 236 SKDRAPGLGTEAIEPPNWPLQFCEVWDTGLRDFIISNLADPITGMLPWE 90
           SKDRAPGLGTEAIEPPNW  QFCEVWDTGL+DF++S  A+P TG++PWE
Sbjct: 553 SKDRAPGLGTEAIEPPNWRRQFCEVWDTGLKDFLVSYFAEPATGLMPWE 601


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