BLASTX nr result

ID: Coptis24_contig00029276 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029276
         (773 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17294.3| unnamed protein product [Vitis vinifera]              331   1e-88
ref|XP_002265361.1| PREDICTED: uncharacterized protein LOC100264...   331   1e-88
ref|XP_002516381.1| Carboxy-terminal kinesin, putative [Ricinus ...   316   4e-84
ref|XP_002321106.1| predicted protein [Populus trichocarpa] gi|2...   301   8e-80
ref|XP_003537528.1| PREDICTED: uncharacterized protein LOC100785...   285   1e-74

>emb|CBI17294.3| unnamed protein product [Vitis vinifera]
          Length = 1251

 Score =  331 bits (848), Expect = 1e-88
 Identities = 174/257 (67%), Positives = 198/257 (77%), Gaps = 1/257 (0%)
 Frame = +1

Query: 4    LEKVDVGVQTLLEDSVESEEHLSGFLCGECKSRINHIEDKEA-NALEMQLVPIDGSPSID 180
            ++KVDVGVQTL +++   EE     LC  CKS I  +E KEA  +  +QLVP+DGS S D
Sbjct: 730  VDKVDVGVQTLPQENEAPEEESEAVLCSNCKSTIPQVELKEAFESSNLQLVPVDGSQSAD 789

Query: 181  KSKNQVPKAVEKVLAGAIRREMALEEVCTKQNAEITQLNRLVQQYKHERECNAIIEQTRE 360
            KSK QVPKAVEKVLAGAIRREMALEE CTKQ +EI QLNRL+QQYKHERECN+II QTRE
Sbjct: 790  KSKKQVPKAVEKVLAGAIRREMALEEFCTKQTSEIMQLNRLIQQYKHERECNSIIGQTRE 849

Query: 361  DKIIRLESLMDGVLPTEEFMEEELLSLTNEHKLLKAKYDNHPEVLRTKIELKRVQDELDD 540
            DKIIRLESLMDGVLPTEEF+EEEL+SLT+EHKLLK KY+NHPEVLRTK+ELKRVQDEL+ 
Sbjct: 850  DKIIRLESLMDGVLPTEEFIEEELVSLTHEHKLLKEKYENHPEVLRTKLELKRVQDELER 909

Query: 541  YRNFFEMGEKDVLVEEIQHLRSQLKYYVDSSPTVSAKXXXXXXXXXXXXXXXXXXXXXIP 720
            YRNFF+MGE+DVL+EEIQ LRS L+YY+DSSP    K                     I 
Sbjct: 910  YRNFFDMGERDVLLEEIQDLRSHLQYYIDSSPMPPRKRSPLLQLTYSCQPSLTPPLFTIS 969

Query: 721  ESTEESAEDKFEQERRR 771
            EST ESAE+K EQER R
Sbjct: 970  ESTGESAEEKLEQERLR 986


>ref|XP_002265361.1| PREDICTED: uncharacterized protein LOC100264192 [Vitis vinifera]
          Length = 1354

 Score =  331 bits (848), Expect = 1e-88
 Identities = 174/257 (67%), Positives = 198/257 (77%), Gaps = 1/257 (0%)
 Frame = +1

Query: 4    LEKVDVGVQTLLEDSVESEEHLSGFLCGECKSRINHIEDKEA-NALEMQLVPIDGSPSID 180
            ++KVDVGVQTL +++   EE     LC  CKS I  +E KEA  +  +QLVP+DGS S D
Sbjct: 833  VDKVDVGVQTLPQENEAPEEESEAVLCSNCKSTIPQVELKEAFESSNLQLVPVDGSQSAD 892

Query: 181  KSKNQVPKAVEKVLAGAIRREMALEEVCTKQNAEITQLNRLVQQYKHERECNAIIEQTRE 360
            KSK QVPKAVEKVLAGAIRREMALEE CTKQ +EI QLNRL+QQYKHERECN+II QTRE
Sbjct: 893  KSKKQVPKAVEKVLAGAIRREMALEEFCTKQTSEIMQLNRLIQQYKHERECNSIIGQTRE 952

Query: 361  DKIIRLESLMDGVLPTEEFMEEELLSLTNEHKLLKAKYDNHPEVLRTKIELKRVQDELDD 540
            DKIIRLESLMDGVLPTEEF+EEEL+SLT+EHKLLK KY+NHPEVLRTK+ELKRVQDEL+ 
Sbjct: 953  DKIIRLESLMDGVLPTEEFIEEELVSLTHEHKLLKEKYENHPEVLRTKLELKRVQDELER 1012

Query: 541  YRNFFEMGEKDVLVEEIQHLRSQLKYYVDSSPTVSAKXXXXXXXXXXXXXXXXXXXXXIP 720
            YRNFF+MGE+DVL+EEIQ LRS L+YY+DSSP    K                     I 
Sbjct: 1013 YRNFFDMGERDVLLEEIQDLRSHLQYYIDSSPMPPRKRSPLLQLTYSCQPSLTPPLFTIS 1072

Query: 721  ESTEESAEDKFEQERRR 771
            EST ESAE+K EQER R
Sbjct: 1073 ESTGESAEEKLEQERLR 1089


>ref|XP_002516381.1| Carboxy-terminal kinesin, putative [Ricinus communis]
            gi|223544479|gb|EEF45998.1| Carboxy-terminal kinesin,
            putative [Ricinus communis]
          Length = 1282

 Score =  316 bits (809), Expect = 4e-84
 Identities = 170/257 (66%), Positives = 198/257 (77%), Gaps = 1/257 (0%)
 Frame = +1

Query: 4    LEKVDVGVQTLLEDSVESEEHLSGFLCGECKSRINHIEDKEAN-ALEMQLVPIDGSPSID 180
            +EKVDV VQTL  D  E +  L  F C  CK +   ++DK+A+ +L +QLVPIDGS S D
Sbjct: 764  VEKVDVAVQTLFNDIPEEDPDL--FYCKNCKRK--KLDDKDADDSLSLQLVPIDGSESAD 819

Query: 181  KSKNQVPKAVEKVLAGAIRREMALEEVCTKQNAEITQLNRLVQQYKHERECNAIIEQTRE 360
            KSK QVPKAVEKVLAGAIRREMALEE C KQN+EI QL RLVQQYKHERECNAII +TRE
Sbjct: 820  KSKKQVPKAVEKVLAGAIRREMALEEFCAKQNSEIMQLKRLVQQYKHERECNAIIGETRE 879

Query: 361  DKIIRLESLMDGVLPTEEFMEEELLSLTNEHKLLKAKYDNHPEVLRTKIELKRVQDELDD 540
            DKI+RLESLMDGVLPTEEFMEEEL+SL +EHKLLK KY+NHP+VLRT IELKRVQDEL+ 
Sbjct: 880  DKILRLESLMDGVLPTEEFMEEELVSLMHEHKLLKEKYENHPDVLRTNIELKRVQDELEH 939

Query: 541  YRNFFEMGEKDVLVEEIQHLRSQLKYYVDSSPTVSAKXXXXXXXXXXXXXXXXXXXXXIP 720
            YRNF+++GE++VL+EEIQ LR+QL+YYVDSS + + K                     IP
Sbjct: 940  YRNFYDLGEREVLLEEIQDLRNQLQYYVDSSCSSALKRNSILKLTYSCEPHVPSPLSAIP 999

Query: 721  ESTEESAEDKFEQERRR 771
            E+TEESAE K EQER R
Sbjct: 1000 EATEESAELKLEQERVR 1016


>ref|XP_002321106.1| predicted protein [Populus trichocarpa] gi|222861879|gb|EEE99421.1|
            predicted protein [Populus trichocarpa]
          Length = 1289

 Score =  301 bits (772), Expect = 8e-80
 Identities = 161/256 (62%), Positives = 192/256 (75%)
 Frame = +1

Query: 4    LEKVDVGVQTLLEDSVESEEHLSGFLCGECKSRINHIEDKEANALEMQLVPIDGSPSIDK 183
            ++KVDVGVQT  +D   SE  L   LC  CK++   +E K+A+   +QLVP+DGS S +K
Sbjct: 772  VDKVDVGVQTFPQDYEISETVL---LCANCKTK-TQLEVKDADDSNLQLVPVDGSESNEK 827

Query: 184  SKNQVPKAVEKVLAGAIRREMALEEVCTKQNAEITQLNRLVQQYKHERECNAIIEQTRED 363
             K QVPKAVEKVLAGAIRREMALEE C KQ +EITQLNRLVQQYKHERECNAII QTRED
Sbjct: 828  PKKQVPKAVEKVLAGAIRREMALEEFCAKQASEITQLNRLVQQYKHERECNAIIGQTRED 887

Query: 364  KIIRLESLMDGVLPTEEFMEEELLSLTNEHKLLKAKYDNHPEVLRTKIELKRVQDELDDY 543
            KI+RLESLMDGVLP+++FMEEEL +L +EH+LLK KY+NHPEV RT IELKRVQDEL+ Y
Sbjct: 888  KILRLESLMDGVLPSKDFMEEELAALMHEHELLKEKYENHPEVSRTNIELKRVQDELEHY 947

Query: 544  RNFFEMGEKDVLVEEIQHLRSQLKYYVDSSPTVSAKXXXXXXXXXXXXXXXXXXXXXIPE 723
            RNF+++GEK+VL+EEIQ LRSQL+YY+DSS   + K                     I E
Sbjct: 948  RNFYDLGEKEVLLEEIQDLRSQLQYYIDSSSPSALKRNSLLKLTYTCEPSLAPPLNTIQE 1007

Query: 724  STEESAEDKFEQERRR 771
            STEES ++K E ER R
Sbjct: 1008 STEESPDEKLEMERTR 1023


>ref|XP_003537528.1| PREDICTED: uncharacterized protein LOC100785790 [Glycine max]
          Length = 1246

 Score =  285 bits (728), Expect = 1e-74
 Identities = 154/265 (58%), Positives = 188/265 (70%), Gaps = 13/265 (4%)
 Frame = +1

Query: 10   KVDVGVQTLLEDSVESEEHLSGFLCGECKSRINHIEDKEANALEMQLVPIDGSPSIDKSK 189
            KVDVG+QT L+D V  +  L  F C  CK+R +   ++  N   +QL+P+D     DK K
Sbjct: 720  KVDVGLQTSLDDIVGEDSVL--FTCSNCKNRAHLDANETDNDSNLQLIPVDCLEFADKPK 777

Query: 190  NQVPKAVEKVLAGAIRREMALEEVCTKQNAEITQLNRLVQQYKHERECNAIIEQTREDKI 369
             QV KAVEKVLAG+IRREMALEE C KQ +EI QLNRLVQQYKHERECNAII QTREDKI
Sbjct: 778  KQVIKAVEKVLAGSIRREMALEEFCAKQTSEIMQLNRLVQQYKHERECNAIIAQTREDKI 837

Query: 370  IRLESLMDGVLPTEEFMEEELLSLTNEHKLLKAKYDNHPEVLRTKIELKRVQDELDDYRN 549
            +RLESLMDGVLPTEEFMEEEL++LT+EHK+LK KY+NHPEVL+ +IELK+VQ+EL+ Y+N
Sbjct: 838  LRLESLMDGVLPTEEFMEEELVALTHEHKILKDKYENHPEVLKMEIELKKVQEELEKYQN 897

Query: 550  FFEMGEKDVLVEEIQHLRSQLKYYVDSSPTVSAKXXXXXXXXXXXXXXXXXXXXXIPEST 729
            F+++GE++VL+EEIQ LRSQL++YVDSS T + K                     IPEST
Sbjct: 898  FYKLGEREVLMEEIQSLRSQLQFYVDSSSTSARKQYPLLQLTYSSEPSMAATLTVIPEST 957

Query: 730  EE-------------SAEDKFEQER 765
            EE               E +FEQER
Sbjct: 958  EEREETNETLASSRNDTEAQFEQER 982


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