BLASTX nr result
ID: Coptis24_contig00029271
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00029271 (407 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003615761.1| Zinc transporter [Medicago truncatula] gi|35... 124 8e-27 ref|XP_002313244.1| ZIP transporter [Populus trichocarpa] gi|222... 124 1e-26 ref|XP_002440670.1| hypothetical protein SORBIDRAFT_09g004880 [S... 123 1e-26 gb|AFW82582.1| ZIP zinc/iron transport family protein [Zea mays] 123 2e-26 ref|XP_002299993.1| ZIP transporter [Populus trichocarpa] gi|222... 123 2e-26 >ref|XP_003615761.1| Zinc transporter [Medicago truncatula] gi|355517096|gb|AES98719.1| Zinc transporter [Medicago truncatula] Length = 318 Score = 124 bits (311), Expect = 8e-27 Identities = 61/94 (64%), Positives = 71/94 (75%) Frame = -3 Query: 405 LCFMFSVTTPIGIIFGMIVFSVTGYDDSSPNAXXXXXXXXXXXXXXXIYMALVDLIAVDF 226 +CFMFSVTTP+GII GMI+FS+TGYDDS+PNA IYMALVDLIA DF Sbjct: 225 MCFMFSVTTPMGIILGMILFSLTGYDDSNPNALIIEGLLGSISSGILIYMALVDLIAADF 284 Query: 225 FHNKLMSSQPSLNKGCYIALVLGSASMSVLALWA 124 FHNKLM+S P L K ++AL +GSASMS+LALWA Sbjct: 285 FHNKLMNSDPRLKKASFVALTMGSASMSILALWA 318 >ref|XP_002313244.1| ZIP transporter [Populus trichocarpa] gi|222849652|gb|EEE87199.1| ZIP transporter [Populus trichocarpa] Length = 335 Score = 124 bits (310), Expect = 1e-26 Identities = 60/94 (63%), Positives = 70/94 (74%) Frame = -3 Query: 405 LCFMFSVTTPIGIIFGMIVFSVTGYDDSSPNAXXXXXXXXXXXXXXXIYMALVDLIAVDF 226 +CFMF+VTTP+GI+ GMI+FS+TGYDDS+PNA +YM LVDLIAVDF Sbjct: 242 MCFMFAVTTPMGIVLGMIIFSITGYDDSNPNALIMEGLLGSLSSGVLVYMGLVDLIAVDF 301 Query: 225 FHNKLMSSQPSLNKGCYIALVLGSASMSVLALWA 124 FHNKLMSS P L K +IAL LGS SMS+LALWA Sbjct: 302 FHNKLMSSAPWLKKASFIALALGSTSMSILALWA 335 >ref|XP_002440670.1| hypothetical protein SORBIDRAFT_09g004880 [Sorghum bicolor] gi|241945955|gb|EES19100.1| hypothetical protein SORBIDRAFT_09g004880 [Sorghum bicolor] Length = 391 Score = 123 bits (309), Expect = 1e-26 Identities = 61/94 (64%), Positives = 71/94 (75%) Frame = -3 Query: 405 LCFMFSVTTPIGIIFGMIVFSVTGYDDSSPNAXXXXXXXXXXXXXXXIYMALVDLIAVDF 226 +C MFSVTTP+GI+ GM+VF +TGYDDS+PNA IYMALVDLI++DF Sbjct: 298 MCIMFSVTTPLGILLGMLVFHMTGYDDSNPNALIMEGILGSLSAGILIYMALVDLISLDF 357 Query: 225 FHNKLMSSQPSLNKGCYIALVLGSASMSVLALWA 124 FHNK+MS+ L K CYIALVLGSASMSVLALWA Sbjct: 358 FHNKMMSASLKLKKACYIALVLGSASMSVLALWA 391 >gb|AFW82582.1| ZIP zinc/iron transport family protein [Zea mays] Length = 396 Score = 123 bits (308), Expect = 2e-26 Identities = 60/94 (63%), Positives = 71/94 (75%) Frame = -3 Query: 405 LCFMFSVTTPIGIIFGMIVFSVTGYDDSSPNAXXXXXXXXXXXXXXXIYMALVDLIAVDF 226 +C MFSVTTP+GI+ GM+VF +TGYDDS+PNA IYMALVDL+++DF Sbjct: 303 MCIMFSVTTPLGILLGMLVFHMTGYDDSNPNALIMEGILGSLSAGILIYMALVDLVSLDF 362 Query: 225 FHNKLMSSQPSLNKGCYIALVLGSASMSVLALWA 124 FHNK+MS+ L K CYIALVLGSASMSVLALWA Sbjct: 363 FHNKMMSASLKLKKACYIALVLGSASMSVLALWA 396 >ref|XP_002299993.1| ZIP transporter [Populus trichocarpa] gi|222847251|gb|EEE84798.1| ZIP transporter [Populus trichocarpa] Length = 337 Score = 123 bits (308), Expect = 2e-26 Identities = 60/94 (63%), Positives = 69/94 (73%) Frame = -3 Query: 405 LCFMFSVTTPIGIIFGMIVFSVTGYDDSSPNAXXXXXXXXXXXXXXXIYMALVDLIAVDF 226 +CFMF+VTTP+GI+ GMI+FS+TGYDDS+PNA +YM LVDLIA DF Sbjct: 244 MCFMFAVTTPMGIVLGMIIFSMTGYDDSNPNALIMEGLLGSLSSGILVYMGLVDLIAADF 303 Query: 225 FHNKLMSSQPSLNKGCYIALVLGSASMSVLALWA 124 FHNKLMSS P L K YIAL LGS SMS+LALWA Sbjct: 304 FHNKLMSSAPWLKKASYIALALGSTSMSILALWA 337