BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029242
         (465 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004146126.1| PREDICTED: uncharacterized protein LOC101212...    83   2e-14
gb|AFK45117.1| unknown [Lotus japonicus]                               81   8e-14
gb|AFK38646.1| unknown [Lotus japonicus]                               81   1e-13
ref|XP_002527543.1| 60S ribosomal protein L24, mitochondrial pre...    77   2e-12
ref|NP_194874.1| Ribosomal L28 family [Arabidopsis thaliana] gi|...    77   2e-12

>ref|XP_004146126.1| PREDICTED: uncharacterized protein LOC101212331 [Cucumis sativus]
           gi|449528875|ref|XP_004171427.1| PREDICTED:
           uncharacterized LOC101212331 [Cucumis sativus]
          Length = 221

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 39/58 (67%), Positives = 48/58 (82%)
 Frame = +2

Query: 290 VFNKIVEKVGEVNLAAGGK*SLDKCIPISKVVMGRAKRGLYADRHIQYGNQISEDGGN 463
           +  KI++KVGE NLA G K SL KCIP SK+VMGRA RG+YA RHI++GN++SEDGGN
Sbjct: 8   MMKKILKKVGENNLAPGVKDSLKKCIPDSKIVMGRANRGIYAGRHIRFGNRVSEDGGN 65


>gb|AFK45117.1| unknown [Lotus japonicus]
          Length = 235

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 37/58 (63%), Positives = 47/58 (81%)
 Frame = +2

Query: 290 VFNKIVEKVGEVNLAAGGK*SLDKCIPISKVVMGRAKRGLYADRHIQYGNQISEDGGN 463
           +  K+++KVGE NL+   K SL KCIP +K+VMGRAKRGL+A RHIQ+GN +SEDGGN
Sbjct: 8   MMKKVLKKVGEKNLSPKSKESLQKCIPKTKIVMGRAKRGLFAGRHIQFGNTVSEDGGN 65


>gb|AFK38646.1| unknown [Lotus japonicus]
          Length = 235

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 37/58 (63%), Positives = 46/58 (79%)
 Frame = +2

Query: 290 VFNKIVEKVGEVNLAAGGK*SLDKCIPISKVVMGRAKRGLYADRHIQYGNQISEDGGN 463
           +  K+++KVGE NL    K SL KCIP +K+VMGRAKRGL+A RHIQ+GN +SEDGGN
Sbjct: 8   MMKKVLKKVGEKNLTPKAKESLQKCIPKTKIVMGRAKRGLFAGRHIQFGNTVSEDGGN 65


>ref|XP_002527543.1| 60S ribosomal protein L24, mitochondrial precursor, putative
           [Ricinus communis] gi|223533093|gb|EEF34852.1| 60S
           ribosomal protein L24, mitochondrial precursor, putative
           [Ricinus communis]
          Length = 211

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 35/58 (60%), Positives = 47/58 (81%)
 Frame = +2

Query: 290 VFNKIVEKVGEVNLAAGGK*SLDKCIPISKVVMGRAKRGLYADRHIQYGNQISEDGGN 463
           +   +++KVG+ NL+   K SL KC+P SKVVMGRAKRG++A RHIQ+GN++SEDGGN
Sbjct: 8   MMKNVLKKVGDNNLSPEVKESLKKCMPDSKVVMGRAKRGIFAGRHIQFGNRVSEDGGN 65


>ref|NP_194874.1| Ribosomal L28 family [Arabidopsis thaliana]
           gi|15724234|gb|AAL06510.1|AF412057_1 AT4g31460/F3L17_30
           [Arabidopsis thaliana] gi|5262757|emb|CAB45905.1|
           putative protein [Arabidopsis thaliana]
           gi|7270049|emb|CAB79864.1| putative protein [Arabidopsis
           thaliana] gi|21593391|gb|AAM65340.1| unknown
           [Arabidopsis thaliana] gi|30102482|gb|AAP21159.1|
           At4g31460/F3L17_30 [Arabidopsis thaliana]
           gi|332660516|gb|AEE85916.1| Ribosomal L28 family
           [Arabidopsis thaliana]
          Length = 212

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 36/58 (62%), Positives = 44/58 (75%)
 Frame = +2

Query: 290 VFNKIVEKVGEVNLAAGGK*SLDKCIPISKVVMGRAKRGLYADRHIQYGNQISEDGGN 463
           +  K+V+KVG  N+    K  L  C+P +KVVMGRAKRGLYA RHIQYGN++SEDGGN
Sbjct: 8   MMKKLVKKVGAENITPELKEKLKACVPDTKVVMGRAKRGLYAGRHIQYGNRVSEDGGN 65