BLASTX nr result

ID: Coptis24_contig00029240 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029240
         (336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276725.2| PREDICTED: structure-specific endonuclease s...   169   2e-40
emb|CBI15837.3| unnamed protein product [Vitis vinifera]              169   2e-40
ref|XP_002319418.1| predicted protein [Populus trichocarpa] gi|2...   167   1e-39
ref|XP_002325655.1| predicted protein [Populus trichocarpa] gi|2...   165   4e-39
ref|XP_004145233.1| PREDICTED: uncharacterized protein LOC101203...   160   1e-37

>ref|XP_002276725.2| PREDICTED: structure-specific endonuclease subunit SLX1 homolog
           2-like [Vitis vinifera]
          Length = 364

 Score =  169 bits (428), Expect = 2e-40
 Identities = 74/110 (67%), Positives = 88/110 (80%)
 Frame = -3

Query: 331 TQLKRPWEMILCIYGFPTNVSALKFEWAWQHPTGSLVVKKPTSSLESLPGIGDNIKLAYK 152
           T+ KRPWEM+LCIYGFPTNVSAL+FEWAWQHPT SL V+K  +  +SL GI + IKLAY 
Sbjct: 67  TKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPTESLAVRKAAAGFKSLSGIANKIKLAYT 126

Query: 151 MLNLPPWQSMNLTVNFLSTKYINDAVGCPSLPKQVKVQICPMDELPCYTG 2
           M  LP WQS+NLTVNF STKY   + GCP LP+ ++VQ+ PMDELPCY+G
Sbjct: 127 MFTLPAWQSLNLTVNFFSTKYTKHSAGCPILPEHMRVQVSPMDELPCYSG 176


>emb|CBI15837.3| unnamed protein product [Vitis vinifera]
          Length = 346

 Score =  169 bits (428), Expect = 2e-40
 Identities = 74/110 (67%), Positives = 88/110 (80%)
 Frame = -3

Query: 331 TQLKRPWEMILCIYGFPTNVSALKFEWAWQHPTGSLVVKKPTSSLESLPGIGDNIKLAYK 152
           T+ KRPWEM+LCIYGFPTNVSAL+FEWAWQHPT SL V+K  +  +SL GI + IKLAY 
Sbjct: 67  TKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPTESLAVRKAAAGFKSLSGIANKIKLAYT 126

Query: 151 MLNLPPWQSMNLTVNFLSTKYINDAVGCPSLPKQVKVQICPMDELPCYTG 2
           M  LP WQS+NLTVNF STKY   + GCP LP+ ++VQ+ PMDELPCY+G
Sbjct: 127 MFTLPAWQSLNLTVNFFSTKYTKHSAGCPILPEHMRVQVSPMDELPCYSG 176


>ref|XP_002319418.1| predicted protein [Populus trichocarpa] gi|222857794|gb|EEE95341.1|
           predicted protein [Populus trichocarpa]
          Length = 192

 Score =  167 bits (422), Expect = 1e-39
 Identities = 70/108 (64%), Positives = 89/108 (82%)
 Frame = -3

Query: 331 TQLKRPWEMILCIYGFPTNVSALKFEWAWQHPTGSLVVKKPTSSLESLPGIGDNIKLAYK 152
           T+ +RPWEM+ CIYGFPTNV+AL+FEWAWQHPT S+ V++  ++ +S  G+ + IKLAY 
Sbjct: 55  TKKRRPWEMVFCIYGFPTNVAALQFEWAWQHPTESVAVRQAAAAFKSFSGVANKIKLAYT 114

Query: 151 MLNLPPWQSMNLTVNFLSTKYINDAVGCPSLPKQVKVQICPMDELPCY 8
           MLNLP WQS+N+T+N+ ST Y   +VGCPSLPK +KVQICPMDELPCY
Sbjct: 115 MLNLPSWQSLNITINYFSTNYKVHSVGCPSLPKNMKVQICPMDELPCY 162


>ref|XP_002325655.1| predicted protein [Populus trichocarpa] gi|222862530|gb|EEF00037.1|
           predicted protein [Populus trichocarpa]
          Length = 207

 Score =  165 bits (417), Expect = 4e-39
 Identities = 68/109 (62%), Positives = 91/109 (83%)
 Frame = -3

Query: 331 TQLKRPWEMILCIYGFPTNVSALKFEWAWQHPTGSLVVKKPTSSLESLPGIGDNIKLAYK 152
           T+ +RPWEM++C+YGFPTNV+AL+FEWAWQHPT S+ V++  ++ +S  G+ + IKLAY 
Sbjct: 70  TKKRRPWEMVICVYGFPTNVAALQFEWAWQHPTESVAVRQAAAAFKSFSGVANKIKLAYT 129

Query: 151 MLNLPPWQSMNLTVNFLSTKYINDAVGCPSLPKQVKVQICPMDELPCYT 5
           MLNLP WQS+N+TVN+ ST+Y   + GCPSLPK +KVQICPM+ELPCY+
Sbjct: 130 MLNLPSWQSLNITVNYFSTQYKVHSAGCPSLPKNMKVQICPMNELPCYS 178


>ref|XP_004145233.1| PREDICTED: uncharacterized protein LOC101203492 [Cucumis sativus]
           gi|449471301|ref|XP_004153269.1| PREDICTED:
           uncharacterized protein LOC101204996 [Cucumis sativus]
           gi|449506301|ref|XP_004162709.1| PREDICTED:
           uncharacterized protein LOC101229010 [Cucumis sativus]
          Length = 395

 Score =  160 bits (405), Expect = 1e-37
 Identities = 66/109 (60%), Positives = 89/109 (81%)
 Frame = -3

Query: 331 TQLKRPWEMILCIYGFPTNVSALKFEWAWQHPTGSLVVKKPTSSLESLPGIGDNIKLAYK 152
           T+ KRPWEM+LCIYGFPTNVSAL+FEWAWQHP  SL V+   ++ +SL G+ + +KLAY 
Sbjct: 76  TKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAYT 135

Query: 151 MLNLPPWQSMNLTVNFLSTKYINDAVGCPSLPKQVKVQICPMDELPCYT 5
           ML LP W+ +N+TVN+ STK++ +A GCPSLP+ +KVQ+ P++ELPCY+
Sbjct: 136 MLTLPAWRGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPINELPCYS 184


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