BLASTX nr result

ID: Coptis24_contig00029238 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029238
         (287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284223.2| PREDICTED: ABC transporter B family member 2...   128   6e-28
emb|CBI31730.3| unnamed protein product [Vitis vinifera]              128   6e-28
emb|CAN75056.1| hypothetical protein VITISV_002627 [Vitis vinifera]   128   6e-28
ref|XP_002316309.1| multidrug/pheromone exporter, MDR family, AB...   126   2e-27
ref|XP_003518659.1| PREDICTED: ABC transporter B family member 2...   125   5e-27

>ref|XP_002284223.2| PREDICTED: ABC transporter B family member 20-like [Vitis vinifera]
          Length = 1410

 Score =  128 bits (321), Expect = 6e-28
 Identities = 62/95 (65%), Positives = 76/95 (80%)
 Frame = +1

Query: 1   IRNHKETSSFQIDKDFSAGHSFQEPSSPKMAKSPSLQRMHFTHAFQPPEGTFNNLQESPK 180
           +RN+KET++FQI+KD SA H FQEPSSPKM KSPSLQR+   H F+P +  FN+ QESPK
Sbjct: 650 VRNYKETATFQIEKDSSASHCFQEPSSPKMVKSPSLQRVPGIHGFRPSDLAFNS-QESPK 708

Query: 181 AQKPPSELIMDNGLPSDAADKEPSIKRQGSFEMRL 285
            + PP E +M+NG+P D+ DKEPSIKRQ SFEMRL
Sbjct: 709 TRSPPPEQMMENGVPLDSTDKEPSIKRQDSFEMRL 743


>emb|CBI31730.3| unnamed protein product [Vitis vinifera]
          Length = 1315

 Score =  128 bits (321), Expect = 6e-28
 Identities = 62/95 (65%), Positives = 76/95 (80%)
 Frame = +1

Query: 1   IRNHKETSSFQIDKDFSAGHSFQEPSSPKMAKSPSLQRMHFTHAFQPPEGTFNNLQESPK 180
           +RN+KET++FQI+KD SA H FQEPSSPKM KSPSLQR+   H F+P +  FN+ QESPK
Sbjct: 682 VRNYKETATFQIEKDSSASHCFQEPSSPKMVKSPSLQRVPGIHGFRPSDLAFNS-QESPK 740

Query: 181 AQKPPSELIMDNGLPSDAADKEPSIKRQGSFEMRL 285
            + PP E +M+NG+P D+ DKEPSIKRQ SFEMRL
Sbjct: 741 TRSPPPEQMMENGVPLDSTDKEPSIKRQDSFEMRL 775


>emb|CAN75056.1| hypothetical protein VITISV_002627 [Vitis vinifera]
          Length = 1036

 Score =  128 bits (321), Expect = 6e-28
 Identities = 62/95 (65%), Positives = 76/95 (80%)
 Frame = +1

Query: 1   IRNHKETSSFQIDKDFSAGHSFQEPSSPKMAKSPSLQRMHFTHAFQPPEGTFNNLQESPK 180
           +RN+KET++FQI+KD SA H FQEPSSPKM KSPSLQR+   H F+P +  FN+ QESPK
Sbjct: 676 VRNYKETATFQIEKDSSASHCFQEPSSPKMVKSPSLQRVPGIHGFRPSDLAFNS-QESPK 734

Query: 181 AQKPPSELIMDNGLPSDAADKEPSIKRQGSFEMRL 285
            + PP E +M+NG+P D+ DKEPSIKRQ SFEMRL
Sbjct: 735 TRSPPPEQMMENGVPLDSTDKEPSIKRQDSFEMRL 769


>ref|XP_002316309.1| multidrug/pheromone exporter, MDR family, ABC transporter family
           [Populus trichocarpa] gi|222865349|gb|EEF02480.1|
           multidrug/pheromone exporter, MDR family, ABC
           transporter family [Populus trichocarpa]
          Length = 1397

 Score =  126 bits (316), Expect = 2e-27
 Identities = 62/95 (65%), Positives = 77/95 (81%)
 Frame = +1

Query: 1   IRNHKETSSFQIDKDFSAGHSFQEPSSPKMAKSPSLQRMHFTHAFQPPEGTFNNLQESPK 180
           +RN+ ET++FQ++KD S GHS+QEPSSPKMAKSPSLQR+     F+PP+G FN+ QESPK
Sbjct: 650 VRNYTETAAFQVEKDSSTGHSYQEPSSPKMAKSPSLQRV--PGIFRPPDGMFNS-QESPK 706

Query: 181 AQKPPSELIMDNGLPSDAADKEPSIKRQGSFEMRL 285
              PP E +++NGLP D ADKEPSI+RQ SFEMRL
Sbjct: 707 VLSPPPEKMIENGLPLDGADKEPSIRRQDSFEMRL 741


>ref|XP_003518659.1| PREDICTED: ABC transporter B family member 20-like [Glycine max]
          Length = 1402

 Score =  125 bits (313), Expect = 5e-27
 Identities = 65/95 (68%), Positives = 80/95 (84%)
 Frame = +1

Query: 1   IRNHKETSSFQIDKDFSAGHSFQEPSSPKMAKSPSLQRMHFTHAFQPPEGTFNNLQESPK 180
           +RN+KETS+FQI+KD S+ HSF+EPSSPKM KSPSLQR+  ++A +PP+G FN L ESPK
Sbjct: 654 VRNYKETSAFQIEKD-SSSHSFKEPSSPKMIKSPSLQRV--SNASRPPDGAFN-LLESPK 709

Query: 181 AQKPPSELIMDNGLPSDAADKEPSIKRQGSFEMRL 285
            Q PPSE +++NGL  DAADKEPSI+RQ SFEMRL
Sbjct: 710 VQSPPSEKMLENGLALDAADKEPSIRRQDSFEMRL 744


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