BLASTX nr result

ID: Coptis24_contig00029236 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029236
         (365 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002889212.1| hypothetical protein ARALYDRAFT_895781 [Arab...    75   2e-16
ref|XP_002271826.2| PREDICTED: wall-associated receptor kinase-l...    76   2e-16
emb|CBI31255.3| unnamed protein product [Vitis vinifera]               76   2e-16
ref|XP_002301893.1| predicted protein [Populus trichocarpa] gi|2...    76   5e-15
tpg|DAA36923.1| TPA: putative WAK family receptor-like protein k...    70   2e-14

>ref|XP_002889212.1| hypothetical protein ARALYDRAFT_895781 [Arabidopsis lyrata subsp.
           lyrata] gi|297335053|gb|EFH65471.1| hypothetical protein
           ARALYDRAFT_895781 [Arabidopsis lyrata subsp. lyrata]
          Length = 348

 Score = 75.1 bits (183), Expect(2) = 2e-16
 Identities = 33/66 (50%), Positives = 47/66 (71%)
 Frame = -2

Query: 352 LPLETRLRIAMDIADAVTYLHLANSKTIIHRHISSDNIFLDQHFGAKLSDFGLSVSIPYG 173
           LP + R+RIA  +A A+ YLH+  S+ +IHRH+ + N+ LD +  AKL DFGLS+ IP G
Sbjct: 157 LPWKWRVRIAAQVAAAIVYLHVGKSRPLIHRHVKTGNVLLDNNLNAKLFDFGLSLEIPLG 216

Query: 172 ERHVDA 155
           E +V+A
Sbjct: 217 ETYVEA 222



 Score = 35.4 bits (80), Expect(2) = 2e-16
 Identities = 15/29 (51%), Positives = 19/29 (65%)
 Frame = -3

Query: 153 VVGTFGFTGPECIATGRYIEKSDVLGIGA 67
           V GT GF  PE + TG++ EK+DV   GA
Sbjct: 224 VEGTIGFIAPESVDTGKFNEKTDVFAFGA 252


>ref|XP_002271826.2| PREDICTED: wall-associated receptor kinase-like 8-like [Vitis
           vinifera]
          Length = 331

 Score = 76.3 bits (186), Expect(2) = 2e-16
 Identities = 41/76 (53%), Positives = 52/76 (68%), Gaps = 3/76 (3%)
 Frame = -2

Query: 358 PPLPL--ETRLRIAMDIADAVTYLHLANSKTIIHRHISSDNIFLDQHFGAKLSDFGLSVS 185
           PP PL  ++RLRIA DIA+ + YLH+A  ++IIH  I   + FLDQ   AKLSDF LS++
Sbjct: 138 PPNPLSWKSRLRIAYDIANVIAYLHIAFPRSIIHTDIKPSSFFLDQDCAAKLSDFSLSIT 197

Query: 184 IPYGERHV-DASRGYF 140
           +P GE HV D  RG F
Sbjct: 198 LPEGEMHVEDEIRGTF 213



 Score = 33.9 bits (76), Expect(2) = 2e-16
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = -3

Query: 156 QVVGTFGFTGPECIATGRYIEKSDVLGIG 70
           ++ GTFG+  PE + +G Y EK+DV   G
Sbjct: 208 EIRGTFGYLAPETLISGVYTEKNDVFSFG 236


>emb|CBI31255.3| unnamed protein product [Vitis vinifera]
          Length = 321

 Score = 76.3 bits (186), Expect(2) = 2e-16
 Identities = 41/76 (53%), Positives = 52/76 (68%), Gaps = 3/76 (3%)
 Frame = -2

Query: 358 PPLPL--ETRLRIAMDIADAVTYLHLANSKTIIHRHISSDNIFLDQHFGAKLSDFGLSVS 185
           PP PL  ++RLRIA DIA+ + YLH+A  ++IIH  I   + FLDQ   AKLSDF LS++
Sbjct: 130 PPNPLSWKSRLRIAYDIANVIAYLHIAFPRSIIHTDIKPSSFFLDQDCAAKLSDFSLSIT 189

Query: 184 IPYGERHV-DASRGYF 140
           +P GE HV D  RG F
Sbjct: 190 LPEGEMHVEDEIRGTF 205



 Score = 33.9 bits (76), Expect(2) = 2e-16
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = -3

Query: 156 QVVGTFGFTGPECIATGRYIEKSDVLGIG 70
           ++ GTFG+  PE + +G Y EK+DV   G
Sbjct: 200 EIRGTFGYLAPETLISGVYTEKNDVFSFG 228


>ref|XP_002301893.1| predicted protein [Populus trichocarpa] gi|222843619|gb|EEE81166.1|
           predicted protein [Populus trichocarpa]
          Length = 323

 Score = 75.9 bits (185), Expect(2) = 5e-15
 Identities = 39/68 (57%), Positives = 47/68 (69%)
 Frame = -2

Query: 364 HLPPLPLETRLRIAMDIADAVTYLHLANSKTIIHRHISSDNIFLDQHFGAKLSDFGLSVS 185
           H   LP  TRL+IA +IA+AV YLH A  + IIHR I   NIFL+Q++ AKLSDF  S+S
Sbjct: 132 HYGSLPWGTRLKIAKEIANAVAYLHTAFPRPIIHRDIKPANIFLNQNYAAKLSDFSFSIS 191

Query: 184 IPYGERHV 161
           IP GE  V
Sbjct: 192 IPEGESKV 199



 Score = 29.6 bits (65), Expect(2) = 5e-15
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -3

Query: 153 VVGTFGFTGPECIATGRYIEKSDVLGIGAV 64
           +VGTFGF  P+   T    EK+DV   G +
Sbjct: 204 LVGTFGFLDPDYTMTNFVTEKTDVFSFGVL 233


>tpg|DAA36923.1| TPA: putative WAK family receptor-like protein kinase [Zea mays]
          Length = 767

 Score = 70.5 bits (171), Expect(2) = 2e-14
 Identities = 38/75 (50%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
 Frame = -2

Query: 361 LPPLPLETRLRIAMDIADAVTYLHLANSKTIIHRHISSDNIFLDQHFGAKLSDFGLSVSI 182
           L  LP E RLRIA ++A A+TYLH A S +I+HR + S N+ L+  + AK+SDFG S SI
Sbjct: 536 LQQLPWEARLRIAAEVAGALTYLHSAASVSILHRDVKSMNVLLNDSYTAKVSDFGASRSI 595

Query: 181 PYGERH-VDASRGYF 140
           P  + H V A +G F
Sbjct: 596 PIDQTHLVTAVQGTF 610



 Score = 33.1 bits (74), Expect(2) = 2e-14
 Identities = 15/30 (50%), Positives = 18/30 (60%)
 Frame = -3

Query: 153 VVGTFGFTGPECIATGRYIEKSDVLGIGAV 64
           V GTFG+  PE   TG+  EKSDV   G +
Sbjct: 606 VQGTFGYLDPEYFHTGQLNEKSDVYSFGVI 635


Top