BLASTX nr result
ID: Coptis24_contig00029226
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00029226 (410 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002525446.1| GATA transcription factor, putative [Ricinus... 89 4e-16 emb|CAN83570.1| hypothetical protein VITISV_041707 [Vitis vinifera] 87 1e-15 emb|CBI29927.3| unnamed protein product [Vitis vinifera] 86 4e-15 ref|XP_002282225.1| PREDICTED: GATA transcription factor 9-like ... 86 4e-15 ref|XP_002325826.1| predicted protein [Populus trichocarpa] gi|2... 77 1e-12 >ref|XP_002525446.1| GATA transcription factor, putative [Ricinus communis] gi|223535259|gb|EEF36936.1| GATA transcription factor, putative [Ricinus communis] Length = 171 Score = 89.0 bits (219), Expect = 4e-16 Identities = 50/90 (55%), Positives = 57/90 (63%), Gaps = 2/90 (2%) Frame = +1 Query: 139 MDFCRNVSVSGGLPSEYQPEQVI--SPAYSKLNGXXXXXXXXLDDLFPIQNTEGDVSLEW 312 MDFCRNVSVS SEY P++ + SP+ G LDDLF QNTE D SLEW Sbjct: 1 MDFCRNVSVS----SEYHPQEQVLQSPSLCSKFGAAITPASPLDDLFSAQNTEVDFSLEW 56 Query: 313 LSAFVEDCLSSSGNCIAAAPVISHEQITNT 402 LS FVEDCLSS+GNC+ A V S Q TN+ Sbjct: 57 LSVFVEDCLSSTGNCLPAPAVSSSVQNTNS 86 >emb|CAN83570.1| hypothetical protein VITISV_041707 [Vitis vinifera] Length = 620 Score = 87.0 bits (214), Expect = 1e-15 Identities = 51/91 (56%), Positives = 57/91 (62%) Frame = +1 Query: 136 VMDFCRNVSVSGGLPSEYQPEQVISPAYSKLNGXXXXXXXXLDDLFPIQNTEGDVSLEWL 315 VMDF R VSVSG EY EQV S SKL G LDDLF QNTE DVSLEWL Sbjct: 321 VMDFYREVSVSG----EYPQEQVPSTVCSKLGGLSAGS---LDDLFSTQNTEVDVSLEWL 373 Query: 316 SAFVEDCLSSSGNCIAAAPVISHEQITNTPT 408 S FVEDCLSS+GNC+ A ++ + T P+ Sbjct: 374 SIFVEDCLSSTGNCLPAPKNVASDSATPKPS 404 >emb|CBI29927.3| unnamed protein product [Vitis vinifera] Length = 265 Score = 85.5 bits (210), Expect = 4e-15 Identities = 50/90 (55%), Positives = 56/90 (62%) Frame = +1 Query: 139 MDFCRNVSVSGGLPSEYQPEQVISPAYSKLNGXXXXXXXXLDDLFPIQNTEGDVSLEWLS 318 MDF R VSVSG EY EQV S SKL G LDDLF QNTE DVSLEWLS Sbjct: 1 MDFYREVSVSG----EYPQEQVPSTVCSKLGGLSAGS---LDDLFSTQNTEVDVSLEWLS 53 Query: 319 AFVEDCLSSSGNCIAAAPVISHEQITNTPT 408 FVEDCLSS+GNC+ A ++ + T P+ Sbjct: 54 IFVEDCLSSTGNCLPAPKNVASDSATPKPS 83 >ref|XP_002282225.1| PREDICTED: GATA transcription factor 9-like [Vitis vinifera] Length = 299 Score = 85.5 bits (210), Expect = 4e-15 Identities = 50/90 (55%), Positives = 56/90 (62%) Frame = +1 Query: 139 MDFCRNVSVSGGLPSEYQPEQVISPAYSKLNGXXXXXXXXLDDLFPIQNTEGDVSLEWLS 318 MDF R VSVSG EY EQV S SKL G LDDLF QNTE DVSLEWLS Sbjct: 1 MDFYREVSVSG----EYPQEQVPSTVCSKLGGLSAGS---LDDLFSTQNTEVDVSLEWLS 53 Query: 319 AFVEDCLSSSGNCIAAAPVISHEQITNTPT 408 FVEDCLSS+GNC+ A ++ + T P+ Sbjct: 54 IFVEDCLSSTGNCLPAPKNVASDSATPKPS 83 >ref|XP_002325826.1| predicted protein [Populus trichocarpa] gi|222862701|gb|EEF00208.1| predicted protein [Populus trichocarpa] Length = 294 Score = 77.0 bits (188), Expect = 1e-12 Identities = 48/90 (53%), Positives = 55/90 (61%), Gaps = 2/90 (2%) Frame = +1 Query: 139 MDFCRNVSVSGGLPSEYQPEQVIS--PAYSKLNGXXXXXXXXLDDLFPIQNTEGDVSLEW 312 MDFCRNV+VSG +Q E V++ P S L LDDLF QNTE D S+EW Sbjct: 1 MDFCRNVTVSGEY--HHQQEHVLASPPPCSTLTAAAASNSP-LDDLFSAQNTEVDFSMEW 57 Query: 313 LSAFVEDCLSSSGNCIAAAPVISHEQITNT 402 LS FVEDCLSS+GNC+ A S Q TNT Sbjct: 58 LSVFVEDCLSSTGNCLPAP--TSDAQKTNT 85