BLASTX nr result

ID: Coptis24_contig00029226 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029226
         (410 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525446.1| GATA transcription factor, putative [Ricinus...    89   4e-16
emb|CAN83570.1| hypothetical protein VITISV_041707 [Vitis vinifera]    87   1e-15
emb|CBI29927.3| unnamed protein product [Vitis vinifera]               86   4e-15
ref|XP_002282225.1| PREDICTED: GATA transcription factor 9-like ...    86   4e-15
ref|XP_002325826.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12

>ref|XP_002525446.1| GATA transcription factor, putative [Ricinus communis]
           gi|223535259|gb|EEF36936.1| GATA transcription factor,
           putative [Ricinus communis]
          Length = 171

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 50/90 (55%), Positives = 57/90 (63%), Gaps = 2/90 (2%)
 Frame = +1

Query: 139 MDFCRNVSVSGGLPSEYQPEQVI--SPAYSKLNGXXXXXXXXLDDLFPIQNTEGDVSLEW 312
           MDFCRNVSVS    SEY P++ +  SP+     G        LDDLF  QNTE D SLEW
Sbjct: 1   MDFCRNVSVS----SEYHPQEQVLQSPSLCSKFGAAITPASPLDDLFSAQNTEVDFSLEW 56

Query: 313 LSAFVEDCLSSSGNCIAAAPVISHEQITNT 402
           LS FVEDCLSS+GNC+ A  V S  Q TN+
Sbjct: 57  LSVFVEDCLSSTGNCLPAPAVSSSVQNTNS 86


>emb|CAN83570.1| hypothetical protein VITISV_041707 [Vitis vinifera]
          Length = 620

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 51/91 (56%), Positives = 57/91 (62%)
 Frame = +1

Query: 136 VMDFCRNVSVSGGLPSEYQPEQVISPAYSKLNGXXXXXXXXLDDLFPIQNTEGDVSLEWL 315
           VMDF R VSVSG    EY  EQV S   SKL G        LDDLF  QNTE DVSLEWL
Sbjct: 321 VMDFYREVSVSG----EYPQEQVPSTVCSKLGGLSAGS---LDDLFSTQNTEVDVSLEWL 373

Query: 316 SAFVEDCLSSSGNCIAAAPVISHEQITNTPT 408
           S FVEDCLSS+GNC+ A   ++ +  T  P+
Sbjct: 374 SIFVEDCLSSTGNCLPAPKNVASDSATPKPS 404


>emb|CBI29927.3| unnamed protein product [Vitis vinifera]
          Length = 265

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 50/90 (55%), Positives = 56/90 (62%)
 Frame = +1

Query: 139 MDFCRNVSVSGGLPSEYQPEQVISPAYSKLNGXXXXXXXXLDDLFPIQNTEGDVSLEWLS 318
           MDF R VSVSG    EY  EQV S   SKL G        LDDLF  QNTE DVSLEWLS
Sbjct: 1   MDFYREVSVSG----EYPQEQVPSTVCSKLGGLSAGS---LDDLFSTQNTEVDVSLEWLS 53

Query: 319 AFVEDCLSSSGNCIAAAPVISHEQITNTPT 408
            FVEDCLSS+GNC+ A   ++ +  T  P+
Sbjct: 54  IFVEDCLSSTGNCLPAPKNVASDSATPKPS 83


>ref|XP_002282225.1| PREDICTED: GATA transcription factor 9-like [Vitis vinifera]
          Length = 299

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 50/90 (55%), Positives = 56/90 (62%)
 Frame = +1

Query: 139 MDFCRNVSVSGGLPSEYQPEQVISPAYSKLNGXXXXXXXXLDDLFPIQNTEGDVSLEWLS 318
           MDF R VSVSG    EY  EQV S   SKL G        LDDLF  QNTE DVSLEWLS
Sbjct: 1   MDFYREVSVSG----EYPQEQVPSTVCSKLGGLSAGS---LDDLFSTQNTEVDVSLEWLS 53

Query: 319 AFVEDCLSSSGNCIAAAPVISHEQITNTPT 408
            FVEDCLSS+GNC+ A   ++ +  T  P+
Sbjct: 54  IFVEDCLSSTGNCLPAPKNVASDSATPKPS 83


>ref|XP_002325826.1| predicted protein [Populus trichocarpa] gi|222862701|gb|EEF00208.1|
           predicted protein [Populus trichocarpa]
          Length = 294

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 48/90 (53%), Positives = 55/90 (61%), Gaps = 2/90 (2%)
 Frame = +1

Query: 139 MDFCRNVSVSGGLPSEYQPEQVIS--PAYSKLNGXXXXXXXXLDDLFPIQNTEGDVSLEW 312
           MDFCRNV+VSG     +Q E V++  P  S L          LDDLF  QNTE D S+EW
Sbjct: 1   MDFCRNVTVSGEY--HHQQEHVLASPPPCSTLTAAAASNSP-LDDLFSAQNTEVDFSMEW 57

Query: 313 LSAFVEDCLSSSGNCIAAAPVISHEQITNT 402
           LS FVEDCLSS+GNC+ A    S  Q TNT
Sbjct: 58  LSVFVEDCLSSTGNCLPAP--TSDAQKTNT 85


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