BLASTX nr result

ID: Coptis24_contig00029223 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029223
         (507 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317009.1| predicted protein [Populus trichocarpa] gi|2...   167   6e-40
ref|XP_004138566.1| PREDICTED: probable LRR receptor-like serine...   164   9e-39
ref|XP_002269642.2| PREDICTED: putative receptor-like protein ki...   161   5e-38
ref|XP_002271317.2| PREDICTED: probable LRR receptor-like serine...   160   1e-37
ref|XP_003616620.1| Receptor-like protein kinase [Medicago trunc...   160   1e-37

>ref|XP_002317009.1| predicted protein [Populus trichocarpa] gi|222860074|gb|EEE97621.1|
            predicted protein [Populus trichocarpa]
          Length = 1017

 Score =  167 bits (424), Expect = 6e-40
 Identities = 93/169 (55%), Positives = 114/169 (67%), Gaps = 3/169 (1%)
 Frame = +1

Query: 4    LQSLNLSFNNIEGEVPKKGIFGNATAISIVGNNKLCGGIPELKLPKCKIQKSKKHENSFA 183
            L +LNLSFN+ EGEVP KG FGNATAIS+ GN KLCGGI ELKLPKC  +KSKK +    
Sbjct: 594  LLTLNLSFNDFEGEVPTKGAFGNATAISVDGNKKLCGGISELKLPKCNFKKSKKWK--IP 651

Query: 184  LKISLGVLITSSF---TVAMFLTIYCLRKKPKAKGATEQYMVDLRRVTYNDLHKATNGFS 354
            L + L + I   F    V  F+ +Y  R+K K + +       L +V+Y  L KATNGFS
Sbjct: 652  LWLILLLTIACGFLGVAVVSFVLLYLSRRKRKEQSSELSLKEPLPKVSYEMLLKATNGFS 711

Query: 355  LENLIGMGSYGSVYKGILQQDEGPIAVKVLNLTEHKASKGFLAECEALR 501
             +NLIG G +GSVY+GIL QD+  +A+KVLNL    ASK F+AECEALR
Sbjct: 712  SDNLIGEGGFGSVYRGILDQDDTVVAIKVLNLQTRGASKSFVAECEALR 760


>ref|XP_004138566.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase
            At3g47570-like [Cucumis sativus]
          Length = 1023

 Score =  164 bits (414), Expect = 9e-39
 Identities = 92/174 (52%), Positives = 111/174 (63%), Gaps = 5/174 (2%)
 Frame = +1

Query: 1    VLQSLNLSFNNIEGEVPKKGIFGNATAISIVGNNKLCGGIPELKLPKCKIQKSKKHENSF 180
            VL  LNLSFNN+EGEVP +G+F N TA SI+GN KLC GI EL LP+C++   +K + + 
Sbjct: 593  VLSYLNLSFNNLEGEVPTQGVFKNTTAFSILGNKKLCNGINELNLPRCRLDYPRKQKLTT 652

Query: 181  ALKISLGVLITSSFTVAMFLTIYCL-----RKKPKAKGATEQYMVDLRRVTYNDLHKATN 345
             LKI + V+   S  V   L I CL     RKK      +         V+YNDL KATN
Sbjct: 653  KLKIIISVV---SGLVGALLIICCLLFFWSRKKKNKSDLSPSLKASYFAVSYNDLLKATN 709

Query: 346  GFSLENLIGMGSYGSVYKGILQQDEGPIAVKVLNLTEHKASKGFLAECEALRVI 507
             FS +NLIG+G YGSVYKGIL QD+  +AVKV NL    ASK FLAECEAL+ I
Sbjct: 710  EFSPDNLIGVGGYGSVYKGILSQDKSVVAVKVFNLQHRGASKSFLAECEALKNI 763


>ref|XP_002269642.2| PREDICTED: putative receptor-like protein kinase At3g47110-like
            [Vitis vinifera]
          Length = 1372

 Score =  161 bits (408), Expect = 5e-38
 Identities = 87/172 (50%), Positives = 113/172 (65%), Gaps = 4/172 (2%)
 Frame = +1

Query: 4    LQSLNLSFNNIEGEVPKKGIFGNATAISIVGNNKLCGGIPELKLPKCKIQKSKKHENS-- 177
            L SLNLS+N +EGEVP  G+F N + ISI GNNKLCGGIP+L+LP C I  S KH     
Sbjct: 909  LLSLNLSYNYLEGEVPSGGVFKNVSGISITGNNKLCGGIPQLQLPPCPIVASAKHGKGKH 968

Query: 178  FALKISLGVLITSSFTVAMFLT--IYCLRKKPKAKGATEQYMVDLRRVTYNDLHKATNGF 351
             ++KI + + I     +A  +   ++  RKK   K ++        RV+YN+L KAT GF
Sbjct: 969  LSIKIIIAISIAGVSCLAFIVASVLFYRRKKTTMKSSSTSLGYGYLRVSYNELLKATCGF 1028

Query: 352  SLENLIGMGSYGSVYKGILQQDEGPIAVKVLNLTEHKASKGFLAECEALRVI 507
            +  NLIGMGS+GSVYKG+L Q +  +AVKVLNL +H ASK F+AEC+ LR I
Sbjct: 1029 ASSNLIGMGSFGSVYKGVLSQGKRLVAVKVLNLQQHGASKSFMAECKVLRQI 1080


>ref|XP_002271317.2| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase
            At3g47570-like, partial [Vitis vinifera]
          Length = 965

 Score =  160 bits (404), Expect = 1e-37
 Identities = 89/169 (52%), Positives = 114/169 (67%), Gaps = 2/169 (1%)
 Frame = +1

Query: 7    QSLNLSFNNIEGEVPKKGIFGNATAISIVGNNKLCGGIPELKLPKCKIQKSKKHENSFAL 186
            Q +NLS+N+ EG +P +G+F N +A SI+GN+KLCGGIPE +LPKC +Q+ KK   S AL
Sbjct: 523  QLVNLSYNDFEGILPTEGVFKNVSATSIMGNSKLCGGIPEFQLPKCNLQEPKKRGLSLAL 582

Query: 187  KISLGVL--ITSSFTVAMFLTIYCLRKKPKAKGATEQYMVDLRRVTYNDLHKATNGFSLE 360
            KI +  +  + +   V  FL    LRKK K + A+      L +V+Y  L +AT+GFS  
Sbjct: 583  KIIIATVSGLLAITCVLSFLIFLWLRKK-KGEPASSSSEKSLLKVSYQSLLRATDGFSSS 641

Query: 361  NLIGMGSYGSVYKGILQQDEGPIAVKVLNLTEHKASKGFLAECEALRVI 507
            NLIG+GS+GSVYKGIL  D   IAVKVLNL    ASK F+AECEALR I
Sbjct: 642  NLIGVGSFGSVYKGILDHDGTAIAVKVLNLLRKGASKSFIAECEALRNI 690


>ref|XP_003616620.1| Receptor-like protein kinase [Medicago truncatula]
            gi|355517955|gb|AES99578.1| Receptor-like protein kinase
            [Medicago truncatula]
          Length = 1002

 Score =  160 bits (404), Expect = 1e-37
 Identities = 91/170 (53%), Positives = 107/170 (62%), Gaps = 5/170 (2%)
 Frame = +1

Query: 4    LQSLNLSFNNIEGEVPKKGIFGNATAISIVGNNKLCGGIPELKLPKCKIQKSKKHENSFA 183
            L SLNLSFNN+ GEVP  G+F N TAIS++GNN LC GIP+LKLP C    SKKH     
Sbjct: 585  LNSLNLSFNNLYGEVPINGVFSNVTAISLMGNNDLCEGIPQLKLPPCSRLLSKKHTRFLK 644

Query: 184  LK-----ISLGVLITSSFTVAMFLTIYCLRKKPKAKGATEQYMVDLRRVTYNDLHKATNG 348
             K     +  G+LI+S      F+ IY LRKK K   +          VTY DLH+ATNG
Sbjct: 645  KKFIPIFVIGGILISSM----AFIGIYFLRKKAKKFLSLASLRNGHLEVTYEDLHEATNG 700

Query: 349  FSLENLIGMGSYGSVYKGILQQDEGPIAVKVLNLTEHKASKGFLAECEAL 498
            FS  NL+G GS+GSVYKG L + EGPI VKVL L    ASK F+AEC+ L
Sbjct: 701  FSSSNLVGAGSFGSVYKGSLLKFEGPIVVKVLKLETRGASKSFVAECKVL 750