BLASTX nr result

ID: Coptis24_contig00029213 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029213
         (412 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003589228.1| FAR1-related protein [Medicago truncatula] g...    63   2e-08
ref|XP_002461639.1| hypothetical protein SORBIDRAFT_02g005850 [S...    61   8e-08
ref|XP_002450570.1| hypothetical protein SORBIDRAFT_05g007130 [S...    60   2e-07
ref|XP_002455481.1| hypothetical protein SORBIDRAFT_03g011600 [S...    60   2e-07
ref|XP_002461640.1| hypothetical protein SORBIDRAFT_02g005860 [S...    60   2e-07

>ref|XP_003589228.1| FAR1-related protein [Medicago truncatula]
           gi|355478276|gb|AES59479.1| FAR1-related protein
           [Medicago truncatula]
          Length = 341

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 40/126 (31%), Positives = 59/126 (46%), Gaps = 1/126 (0%)
 Frame = +2

Query: 14  YYLEYGKQNGFXXXXXXXXXXXXDCNDDEVTVCDMICAREGKRDRVEDNSESKVKRRSTS 193
           +Y  + K+ GF                 +   C   CA EG      +N E K KR   S
Sbjct: 189 FYTSFAKKEGFGVRV----------RSTKQKFCLFECANEGTHIVKGENEEGKRKR---S 235

Query: 194 TIRCECKARMRVVKQDDKS-WMVKYFDDTHNHKMVTPNKRVKLRTVKTMPKAVKILVKRF 370
           T R +CKA + + K   +  W++K  ++ HNH MV+P     LR+ K M  A K LV++F
Sbjct: 236 TSRTDCKASLTISKAGKRGKWVIKSINNVHNHGMVSPKSVAYLRSHKKMIAATKSLVEKF 295

Query: 371 DDLNLP 388
           D+  +P
Sbjct: 296 DEEGVP 301


>ref|XP_002461639.1| hypothetical protein SORBIDRAFT_02g005850 [Sorghum bicolor]
           gi|241925016|gb|EER98160.1| hypothetical protein
           SORBIDRAFT_02g005850 [Sorghum bicolor]
          Length = 608

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 36/109 (33%), Positives = 55/109 (50%), Gaps = 1/109 (0%)
 Frame = +2

Query: 2   EGNSYYLEYGKQNGFXXXXXXXXXXXXDCNDDEVTVCDMICAREGKRDRVEDNSESKVKR 181
           EG  +Y  Y K+ GF            D   +E+T+   +C+REG R+ +E   ESK KR
Sbjct: 23  EGFQFYNNYAKEKGFSVRRSYCEW---DSGHNEITLRKFVCSREGFREEMELKRESK-KR 78

Query: 182 RSTSTIRCECKARMRVVK-QDDKSWMVKYFDDTHNHKMVTPNKRVKLRT 325
           +  +  R  C+A++ + + Q  + W VK F   HNH M  P+    LR+
Sbjct: 79  KPRNITRVGCRAKLVIARDQSTEQWYVKDFIGGHNHPMAEPDVACLLRS 127


>ref|XP_002450570.1| hypothetical protein SORBIDRAFT_05g007130 [Sorghum bicolor]
           gi|241936413|gb|EES09558.1| hypothetical protein
           SORBIDRAFT_05g007130 [Sorghum bicolor]
          Length = 698

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 36/109 (33%), Positives = 54/109 (49%), Gaps = 1/109 (0%)
 Frame = +2

Query: 2   EGNSYYLEYGKQNGFXXXXXXXXXXXXDCNDDEVTVCDMICAREGKRDRVEDNSESKVKR 181
           EG  +Y  Y K+ GF            D   +E+T+   +C+REG R+  E   ESK KR
Sbjct: 23  EGFQFYNNYAKEKGFSVRRSYCEW---DSGHNEITLRKFVCSREGFREEKELKRESK-KR 78

Query: 182 RSTSTIRCECKARMRVVK-QDDKSWMVKYFDDTHNHKMVTPNKRVKLRT 325
           +  +  R  C+A++ + + Q  + W VK F   HNH M  P+    LR+
Sbjct: 79  KPRNITRVGCRAKLVIARDQSTEQWYVKDFIGGHNHPMAEPDVACLLRS 127


>ref|XP_002455481.1| hypothetical protein SORBIDRAFT_03g011600 [Sorghum bicolor]
           gi|241927456|gb|EES00601.1| hypothetical protein
           SORBIDRAFT_03g011600 [Sorghum bicolor]
          Length = 608

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 36/109 (33%), Positives = 54/109 (49%), Gaps = 1/109 (0%)
 Frame = +2

Query: 2   EGNSYYLEYGKQNGFXXXXXXXXXXXXDCNDDEVTVCDMICAREGKRDRVEDNSESKVKR 181
           EG  +Y  Y K+ GF            D   +E+T+   +C+REG R+  E   ESK KR
Sbjct: 23  EGFQFYNNYAKEKGFSVRRSYCEW---DSGHNEITLRKFVCSREGFREEKELKRESK-KR 78

Query: 182 RSTSTIRCECKARMRVVK-QDDKSWMVKYFDDTHNHKMVTPNKRVKLRT 325
           +  +  R  C+A++ + + Q  + W VK F   HNH M  P+    LR+
Sbjct: 79  KPRNITRVGCRAKLVIARDQSTEQWYVKDFIGGHNHPMAEPDVACLLRS 127


>ref|XP_002461640.1| hypothetical protein SORBIDRAFT_02g005860 [Sorghum bicolor]
           gi|241925017|gb|EER98161.1| hypothetical protein
           SORBIDRAFT_02g005860 [Sorghum bicolor]
          Length = 370

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 36/109 (33%), Positives = 54/109 (49%), Gaps = 1/109 (0%)
 Frame = +2

Query: 2   EGNSYYLEYGKQNGFXXXXXXXXXXXXDCNDDEVTVCDMICAREGKRDRVEDNSESKVKR 181
           EG  +Y  Y K+ GF            D   +E+T+   +C+REG R+  E   ESK KR
Sbjct: 235 EGFQFYNNYAKEKGFSVRRSYCEW---DSGHNEITLRKFVCSREGFREEKELKRESK-KR 290

Query: 182 RSTSTIRCECKARMRVVK-QDDKSWMVKYFDDTHNHKMVTPNKRVKLRT 325
           +  +  R  C+A++ + + Q  + W VK F   HNH M  P+    LR+
Sbjct: 291 KPRNITRVGCRAKLVIARDQSTEQWYVKDFIGGHNHPMAEPDVACLLRS 339


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