BLASTX nr result
ID: Coptis24_contig00029213
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00029213 (412 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003589228.1| FAR1-related protein [Medicago truncatula] g... 63 2e-08 ref|XP_002461639.1| hypothetical protein SORBIDRAFT_02g005850 [S... 61 8e-08 ref|XP_002450570.1| hypothetical protein SORBIDRAFT_05g007130 [S... 60 2e-07 ref|XP_002455481.1| hypothetical protein SORBIDRAFT_03g011600 [S... 60 2e-07 ref|XP_002461640.1| hypothetical protein SORBIDRAFT_02g005860 [S... 60 2e-07 >ref|XP_003589228.1| FAR1-related protein [Medicago truncatula] gi|355478276|gb|AES59479.1| FAR1-related protein [Medicago truncatula] Length = 341 Score = 63.2 bits (152), Expect = 2e-08 Identities = 40/126 (31%), Positives = 59/126 (46%), Gaps = 1/126 (0%) Frame = +2 Query: 14 YYLEYGKQNGFXXXXXXXXXXXXDCNDDEVTVCDMICAREGKRDRVEDNSESKVKRRSTS 193 +Y + K+ GF + C CA EG +N E K KR S Sbjct: 189 FYTSFAKKEGFGVRV----------RSTKQKFCLFECANEGTHIVKGENEEGKRKR---S 235 Query: 194 TIRCECKARMRVVKQDDKS-WMVKYFDDTHNHKMVTPNKRVKLRTVKTMPKAVKILVKRF 370 T R +CKA + + K + W++K ++ HNH MV+P LR+ K M A K LV++F Sbjct: 236 TSRTDCKASLTISKAGKRGKWVIKSINNVHNHGMVSPKSVAYLRSHKKMIAATKSLVEKF 295 Query: 371 DDLNLP 388 D+ +P Sbjct: 296 DEEGVP 301 >ref|XP_002461639.1| hypothetical protein SORBIDRAFT_02g005850 [Sorghum bicolor] gi|241925016|gb|EER98160.1| hypothetical protein SORBIDRAFT_02g005850 [Sorghum bicolor] Length = 608 Score = 61.2 bits (147), Expect = 8e-08 Identities = 36/109 (33%), Positives = 55/109 (50%), Gaps = 1/109 (0%) Frame = +2 Query: 2 EGNSYYLEYGKQNGFXXXXXXXXXXXXDCNDDEVTVCDMICAREGKRDRVEDNSESKVKR 181 EG +Y Y K+ GF D +E+T+ +C+REG R+ +E ESK KR Sbjct: 23 EGFQFYNNYAKEKGFSVRRSYCEW---DSGHNEITLRKFVCSREGFREEMELKRESK-KR 78 Query: 182 RSTSTIRCECKARMRVVK-QDDKSWMVKYFDDTHNHKMVTPNKRVKLRT 325 + + R C+A++ + + Q + W VK F HNH M P+ LR+ Sbjct: 79 KPRNITRVGCRAKLVIARDQSTEQWYVKDFIGGHNHPMAEPDVACLLRS 127 >ref|XP_002450570.1| hypothetical protein SORBIDRAFT_05g007130 [Sorghum bicolor] gi|241936413|gb|EES09558.1| hypothetical protein SORBIDRAFT_05g007130 [Sorghum bicolor] Length = 698 Score = 60.1 bits (144), Expect = 2e-07 Identities = 36/109 (33%), Positives = 54/109 (49%), Gaps = 1/109 (0%) Frame = +2 Query: 2 EGNSYYLEYGKQNGFXXXXXXXXXXXXDCNDDEVTVCDMICAREGKRDRVEDNSESKVKR 181 EG +Y Y K+ GF D +E+T+ +C+REG R+ E ESK KR Sbjct: 23 EGFQFYNNYAKEKGFSVRRSYCEW---DSGHNEITLRKFVCSREGFREEKELKRESK-KR 78 Query: 182 RSTSTIRCECKARMRVVK-QDDKSWMVKYFDDTHNHKMVTPNKRVKLRT 325 + + R C+A++ + + Q + W VK F HNH M P+ LR+ Sbjct: 79 KPRNITRVGCRAKLVIARDQSTEQWYVKDFIGGHNHPMAEPDVACLLRS 127 >ref|XP_002455481.1| hypothetical protein SORBIDRAFT_03g011600 [Sorghum bicolor] gi|241927456|gb|EES00601.1| hypothetical protein SORBIDRAFT_03g011600 [Sorghum bicolor] Length = 608 Score = 60.1 bits (144), Expect = 2e-07 Identities = 36/109 (33%), Positives = 54/109 (49%), Gaps = 1/109 (0%) Frame = +2 Query: 2 EGNSYYLEYGKQNGFXXXXXXXXXXXXDCNDDEVTVCDMICAREGKRDRVEDNSESKVKR 181 EG +Y Y K+ GF D +E+T+ +C+REG R+ E ESK KR Sbjct: 23 EGFQFYNNYAKEKGFSVRRSYCEW---DSGHNEITLRKFVCSREGFREEKELKRESK-KR 78 Query: 182 RSTSTIRCECKARMRVVK-QDDKSWMVKYFDDTHNHKMVTPNKRVKLRT 325 + + R C+A++ + + Q + W VK F HNH M P+ LR+ Sbjct: 79 KPRNITRVGCRAKLVIARDQSTEQWYVKDFIGGHNHPMAEPDVACLLRS 127 >ref|XP_002461640.1| hypothetical protein SORBIDRAFT_02g005860 [Sorghum bicolor] gi|241925017|gb|EER98161.1| hypothetical protein SORBIDRAFT_02g005860 [Sorghum bicolor] Length = 370 Score = 60.1 bits (144), Expect = 2e-07 Identities = 36/109 (33%), Positives = 54/109 (49%), Gaps = 1/109 (0%) Frame = +2 Query: 2 EGNSYYLEYGKQNGFXXXXXXXXXXXXDCNDDEVTVCDMICAREGKRDRVEDNSESKVKR 181 EG +Y Y K+ GF D +E+T+ +C+REG R+ E ESK KR Sbjct: 235 EGFQFYNNYAKEKGFSVRRSYCEW---DSGHNEITLRKFVCSREGFREEKELKRESK-KR 290 Query: 182 RSTSTIRCECKARMRVVK-QDDKSWMVKYFDDTHNHKMVTPNKRVKLRT 325 + + R C+A++ + + Q + W VK F HNH M P+ LR+ Sbjct: 291 KPRNITRVGCRAKLVIARDQSTEQWYVKDFIGGHNHPMAEPDVACLLRS 339