BLASTX nr result

ID: Coptis24_contig00029209 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029209
         (653 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002436836.1| hypothetical protein SORBIDRAFT_10g009750 [S...   123   5e-41
ref|XP_002280818.1| PREDICTED: uncharacterized transporter AF_07...   168   9e-40
gb|EEE65496.1| hypothetical protein OsJ_20924 [Oryza sativa Japo...   122   1e-39
gb|EEC80368.1| hypothetical protein OsI_22478 [Oryza sativa Indi...   122   1e-39
gb|ACN30664.1| unknown [Zea mays] gi|413944260|gb|AFW76909.1| hy...   121   1e-39

>ref|XP_002436836.1| hypothetical protein SORBIDRAFT_10g009750 [Sorghum bicolor]
           gi|241915059|gb|EER88203.1| hypothetical protein
           SORBIDRAFT_10g009750 [Sorghum bicolor]
          Length = 374

 Score =  123 bits (308), Expect(2) = 5e-41
 Identities = 57/111 (51%), Positives = 85/111 (76%), Gaps = 1/111 (0%)
 Frame = +3

Query: 114 RNRPLWRRIF-FASKKVRSIILLNVIALVYASNIPVLKEVEAIVNPEVFTIVRFTLSAIP 290
           R R  WR++  +   K RS++LLN++ L++ASNI V+K+ EA+++P++F ++RFT++AIP
Sbjct: 112 RARAAWRKVASWVPSKARSLVLLNLVTLIFASNISVVKQAEALLDPDLFNMLRFTIAAIP 171

Query: 291 FIPFVLRERSNVHIRTAGIELGFWVSLGYLMQALGLLTSDAGRASFISLFT 443
           F+P +L+   ++ I   GIELG WVSL YL QA+GL+T+DAGRASFIS  T
Sbjct: 172 FVPLLLKSLRDMQILFRGIELGIWVSLAYLAQAMGLVTADAGRASFISALT 222



 Score = 70.9 bits (172), Expect(2) = 5e-41
 Identities = 31/41 (75%), Positives = 37/41 (90%)
 Frame = +2

Query: 500 VIVVPLLDGMLGAKVPALTWLGAFMSVLGVAMLETSGSPPC 622
           VI+VP LDG++GA+VPA TW GAF+S+LGVAMLE SGSPPC
Sbjct: 223 VIIVPFLDGLIGAEVPAHTWFGAFLSLLGVAMLELSGSPPC 263


>ref|XP_002280818.1| PREDICTED: uncharacterized transporter AF_0788 [Vitis vinifera]
           gi|297737689|emb|CBI26890.3| unnamed protein product
           [Vitis vinifera]
          Length = 460

 Score =  168 bits (425), Expect = 9e-40
 Identities = 86/117 (73%), Positives = 99/117 (84%), Gaps = 1/117 (0%)
 Frame = +3

Query: 96  LSVKKL-RNRPLWRRIFFASKKVRSIILLNVIALVYASNIPVLKEVEAIVNPEVFTIVRF 272
           LS+K L   R LWRRI FAS+KVR IILLNV+ +VYASNIPV+KEVEAI++P  F  VRF
Sbjct: 102 LSLKSLFGRRSLWRRILFASRKVRGIILLNVLTVVYASNIPVVKEVEAIMDPATFAAVRF 161

Query: 273 TLSAIPFIPFVLRERSNVHIRTAGIELGFWVSLGYLMQALGLLTSDAGRASFISLFT 443
            +SAIPFIPFV+R R +V  R AGIELGFWVSLGYLMQ+LGLLTSDAGRASF+S+FT
Sbjct: 162 VVSAIPFIPFVVRARGDVQTRNAGIELGFWVSLGYLMQSLGLLTSDAGRASFLSMFT 218



 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 41/71 (57%), Positives = 49/71 (69%), Gaps = 2/71 (2%)
 Frame = +2

Query: 413 WTRIIYF--TVHILQEHQGGCSFESLW*LEQVIVVPLLDGMLGAKVPALTWLGAFMSVLG 586
           W  + Y   ++ +L    G  SF S++    VIVVPLLDGMLGA VPA TW GA MS+LG
Sbjct: 191 WVSLGYLMQSLGLLTSDAGRASFLSMF---TVIVVPLLDGMLGATVPAHTWFGALMSILG 247

Query: 587 VAMLETSGSPP 619
           VAMLE+SGSPP
Sbjct: 248 VAMLESSGSPP 258


>gb|EEE65496.1| hypothetical protein OsJ_20924 [Oryza sativa Japonica Group]
          Length = 658

 Score =  122 bits (307), Expect(2) = 1e-39
 Identities = 54/111 (48%), Positives = 85/111 (76%), Gaps = 1/111 (0%)
 Frame = +3

Query: 114 RNRPLWRRIF-FASKKVRSIILLNVIALVYASNIPVLKEVEAIVNPEVFTIVRFTLSAIP 290
           R R  WR++     +K RS++LLN++ +V+ASNI V+KE E +++P++F ++RFT+SAIP
Sbjct: 113 RARAAWRKVASLVPRKARSVVLLNLVTIVFASNISVVKEAETMLDPDLFNVLRFTISAIP 172

Query: 291 FIPFVLRERSNVHIRTAGIELGFWVSLGYLMQALGLLTSDAGRASFISLFT 443
           F+P +L+  ++V +   G+ELG WV++GYL QA+GL+T+DAGR +FIS  T
Sbjct: 173 FVPLLLKALNDVQVFIRGVELGIWVAIGYLAQAIGLVTADAGRTAFISSLT 223



 Score = 66.2 bits (160), Expect(2) = 1e-39
 Identities = 27/41 (65%), Positives = 36/41 (87%)
 Frame = +2

Query: 500 VIVVPLLDGMLGAKVPALTWLGAFMSVLGVAMLETSGSPPC 622
           VI+VP LDG+LGA++PA TW+GA +S++GV +LE SGSPPC
Sbjct: 224 VIIVPFLDGILGAEIPAYTWIGALLSLIGVGILELSGSPPC 264


>gb|EEC80368.1| hypothetical protein OsI_22478 [Oryza sativa Indica Group]
          Length = 606

 Score =  122 bits (307), Expect(2) = 1e-39
 Identities = 54/111 (48%), Positives = 85/111 (76%), Gaps = 1/111 (0%)
 Frame = +3

Query: 114 RNRPLWRRIF-FASKKVRSIILLNVIALVYASNIPVLKEVEAIVNPEVFTIVRFTLSAIP 290
           R R  WR++     +K RS++LLN++ +V+ASNI V+KE E +++P++F ++RFT+SAIP
Sbjct: 112 RARAAWRKVASLVPRKARSVVLLNLVTIVFASNISVVKEAETMLDPDLFNVLRFTISAIP 171

Query: 291 FIPFVLRERSNVHIRTAGIELGFWVSLGYLMQALGLLTSDAGRASFISLFT 443
           F+P +L+  ++V +   G+ELG WV++GYL QA+GL+T+DAGR +FIS  T
Sbjct: 172 FVPLLLKALNDVQVFIRGVELGIWVAIGYLAQAIGLVTADAGRTAFISSLT 222



 Score = 66.2 bits (160), Expect(2) = 1e-39
 Identities = 27/41 (65%), Positives = 36/41 (87%)
 Frame = +2

Query: 500 VIVVPLLDGMLGAKVPALTWLGAFMSVLGVAMLETSGSPPC 622
           VI+VP LDG+LGA++PA TW+GA +S++GV +LE SGSPPC
Sbjct: 223 VIIVPFLDGILGAEIPAYTWIGALLSLIGVGILELSGSPPC 263


>gb|ACN30664.1| unknown [Zea mays] gi|413944260|gb|AFW76909.1| hypothetical protein
           ZEAMMB73_627373 [Zea mays]
          Length = 434

 Score =  121 bits (304), Expect(2) = 1e-39
 Identities = 55/111 (49%), Positives = 85/111 (76%), Gaps = 1/111 (0%)
 Frame = +3

Query: 114 RNRPLWRRIF-FASKKVRSIILLNVIALVYASNIPVLKEVEAIVNPEVFTIVRFTLSAIP 290
           R R  WR++  +  +K RS++LLN++ L++ASNI V+K+ EA+++P++F ++RFT++AIP
Sbjct: 110 RARAAWRKVVSWVPRKARSLVLLNLVTLIFASNISVVKQAEALLDPDLFNMLRFTIAAIP 169

Query: 291 FIPFVLRERSNVHIRTAGIELGFWVSLGYLMQALGLLTSDAGRASFISLFT 443
           F+P +L+   N+ I   G+ELG WVS+ YL QA+GL+T+ AGRASFIS  T
Sbjct: 170 FVPLLLKSLRNMQILFRGLELGIWVSVAYLAQAMGLVTAGAGRASFISALT 220



 Score = 67.4 bits (163), Expect(2) = 1e-39
 Identities = 29/41 (70%), Positives = 35/41 (85%)
 Frame = +2

Query: 500 VIVVPLLDGMLGAKVPALTWLGAFMSVLGVAMLETSGSPPC 622
           VI+VP LDG++GA+VPA TW GAF+S+ GV MLE SGSPPC
Sbjct: 221 VIIVPFLDGLIGAEVPAHTWFGAFLSLFGVIMLELSGSPPC 261


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