BLASTX nr result

ID: Coptis24_contig00029201 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029201
         (585 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324216.1| predicted protein [Populus trichocarpa] gi|2...   167   9e-40
ref|XP_002333688.1| predicted protein [Populus trichocarpa] gi|2...   167   9e-40
emb|CBI36080.3| unnamed protein product [Vitis vinifera]              164   1e-38
ref|XP_002515981.1| GATA transcription factor, putative [Ricinus...   164   1e-38
ref|XP_002284028.1| PREDICTED: GATA transcription factor 9 [Viti...   164   1e-38

>ref|XP_002324216.1| predicted protein [Populus trichocarpa] gi|222865650|gb|EEF02781.1|
           predicted protein [Populus trichocarpa]
          Length = 320

 Score =  167 bits (424), Expect = 9e-40
 Identities = 79/114 (69%), Positives = 94/114 (82%), Gaps = 8/114 (7%)
 Frame = +1

Query: 1   RKCLHCGSDKTPQWRTGPLGPKTLCNACGVRFKSGRLVPEYRPAASPTFVLAKHSNSHRK 180
           RKCLHC +DKTPQWRTGP+GPKTLCNACGVR+KSGRLVPEYRPAASPTF+L KHSNSHRK
Sbjct: 207 RKCLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFMLTKHSNSHRK 266

Query: 181 VMELRRKKEMMRS----DHEQFL--YPNAMYGVSGG--DYLVHRQTGSGFTQQL 318
           V+ELRR+KEM+R+     H+QFL  + N ++GVS G  DYL+H+  G  F Q +
Sbjct: 267 VLELRRQKEMVRAQQQHQHQQFLHHHQNMVFGVSNGGDDYLIHQHVGPDFRQMI 320


>ref|XP_002333688.1| predicted protein [Populus trichocarpa] gi|222838294|gb|EEE76659.1|
           predicted protein [Populus trichocarpa]
          Length = 264

 Score =  167 bits (424), Expect = 9e-40
 Identities = 79/114 (69%), Positives = 94/114 (82%), Gaps = 8/114 (7%)
 Frame = +1

Query: 1   RKCLHCGSDKTPQWRTGPLGPKTLCNACGVRFKSGRLVPEYRPAASPTFVLAKHSNSHRK 180
           RKCLHC +DKTPQWRTGP+GPKTLCNACGVR+KSGRLVPEYRPAASPTF+L KHSNSHRK
Sbjct: 151 RKCLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFMLTKHSNSHRK 210

Query: 181 VMELRRKKEMMRS----DHEQFL--YPNAMYGVSGG--DYLVHRQTGSGFTQQL 318
           V+ELRR+KEM+R+     H+QFL  + N ++GVS G  DYL+H+  G  F Q +
Sbjct: 211 VLELRRQKEMVRAQQQHQHQQFLHHHQNMVFGVSNGGDDYLIHQHVGPDFRQMI 264


>emb|CBI36080.3| unnamed protein product [Vitis vinifera]
          Length = 283

 Score =  164 bits (415), Expect = 1e-38
 Identities = 73/107 (68%), Positives = 87/107 (81%), Gaps = 1/107 (0%)
 Frame = +1

Query: 1   RKCLHCGSDKTPQWRTGPLGPKTLCNACGVRFKSGRLVPEYRPAASPTFVLAKHSNSHRK 180
           RKCLHC ++KTPQWRTGP+GPKTLCNACGVRFKSGRLVPEYRPA+SPTFV AKHSNSHRK
Sbjct: 177 RKCLHCAAEKTPQWRTGPMGPKTLCNACGVRFKSGRLVPEYRPASSPTFVSAKHSNSHRK 236

Query: 181 VMELRRKKEMMRSDHEQFLYPNAMYGVSGG-DYLVHRQTGSGFTQQL 318
           V+ELRR+K++ RS H QFL   +++  + G DYL+H   G  F   +
Sbjct: 237 VLELRRQKDLQRSHHHQFLGQTSIFSATNGDDYLIHHHAGPDFRHMI 283


>ref|XP_002515981.1| GATA transcription factor, putative [Ricinus communis]
           gi|223544886|gb|EEF46401.1| GATA transcription factor,
           putative [Ricinus communis]
          Length = 338

 Score =  164 bits (415), Expect = 1e-38
 Identities = 72/108 (66%), Positives = 91/108 (84%), Gaps = 2/108 (1%)
 Frame = +1

Query: 1   RKCLHCGSDKTPQWRTGPLGPKTLCNACGVRFKSGRLVPEYRPAASPTFVLAKHSNSHRK 180
           RKCLHC ++KTPQWRTGP+GPKTLCNACGVR+KSGRLV EYRPAASPTFV AKHSNSHRK
Sbjct: 231 RKCLHCAAEKTPQWRTGPMGPKTLCNACGVRYKSGRLVAEYRPAASPTFVSAKHSNSHRK 290

Query: 181 VMELRRKKEMMRSDHEQFLYPNAMYGVSGG--DYLVHRQTGSGFTQQL 318
           V+ELRR+KE+ R+  EQ+L+ ++++GV+ G  D+L+H  +G  F   +
Sbjct: 291 VLELRRQKELQRAQQEQYLHQSSIFGVTNGGDDFLIHHHSGPNFRHMI 338


>ref|XP_002284028.1| PREDICTED: GATA transcription factor 9 [Vitis vinifera]
          Length = 329

 Score =  164 bits (415), Expect = 1e-38
 Identities = 73/107 (68%), Positives = 87/107 (81%), Gaps = 1/107 (0%)
 Frame = +1

Query: 1   RKCLHCGSDKTPQWRTGPLGPKTLCNACGVRFKSGRLVPEYRPAASPTFVLAKHSNSHRK 180
           RKCLHC ++KTPQWRTGP+GPKTLCNACGVRFKSGRLVPEYRPA+SPTFV AKHSNSHRK
Sbjct: 223 RKCLHCAAEKTPQWRTGPMGPKTLCNACGVRFKSGRLVPEYRPASSPTFVSAKHSNSHRK 282

Query: 181 VMELRRKKEMMRSDHEQFLYPNAMYGVSGG-DYLVHRQTGSGFTQQL 318
           V+ELRR+K++ RS H QFL   +++  + G DYL+H   G  F   +
Sbjct: 283 VLELRRQKDLQRSHHHQFLGQTSIFSATNGDDYLIHHHAGPDFRHMI 329


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