BLASTX nr result
ID: Coptis24_contig00029198
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00029198 (300 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002278511.1| PREDICTED: protein sym-1 [Vitis vinifera] gi... 180 1e-43 ref|XP_002308859.1| predicted protein [Populus trichocarpa] gi|2... 176 2e-42 ref|XP_002323213.1| predicted protein [Populus trichocarpa] gi|2... 174 5e-42 emb|CAN61275.1| hypothetical protein VITISV_033632 [Vitis vinifera] 172 3e-41 ref|XP_003554094.1| PREDICTED: protein sym-1-like [Glycine max] 169 3e-40 >ref|XP_002278511.1| PREDICTED: protein sym-1 [Vitis vinifera] gi|297741716|emb|CBI32848.3| unnamed protein product [Vitis vinifera] Length = 293 Score = 180 bits (456), Expect = 1e-43 Identities = 85/99 (85%), Positives = 90/99 (90%) Frame = -2 Query: 299 VGPTLHFWYLSLSKMVATPGASGAFLRLLLDQFLFSPIFIGFFLCTLLTLEGRPSQIVPK 120 VGPTLHFWYL LSK+V PGASGAFLRLLLDQFLFSPIFIG FL TL+TLEGRPSQ+VPK Sbjct: 176 VGPTLHFWYLYLSKLVTIPGASGAFLRLLLDQFLFSPIFIGVFLSTLVTLEGRPSQVVPK 235 Query: 119 LQQEWLATVLANWQLWIPFQFLNFLFVPQQFQVLAANFI 3 LQQEW + VLANWQLWIPFQFLNF FVPQQFQVLAAN + Sbjct: 236 LQQEWFSAVLANWQLWIPFQFLNFRFVPQQFQVLAANVV 274 >ref|XP_002308859.1| predicted protein [Populus trichocarpa] gi|222854835|gb|EEE92382.1| predicted protein [Populus trichocarpa] Length = 286 Score = 176 bits (445), Expect = 2e-42 Identities = 82/99 (82%), Positives = 90/99 (90%) Frame = -2 Query: 299 VGPTLHFWYLSLSKMVATPGASGAFLRLLLDQFLFSPIFIGFFLCTLLTLEGRPSQIVPK 120 VGPTLHFWYL LSK+V PGASGAFLRLL+DQF+FSPIFIG FL TL+TLEGRPS+++PK Sbjct: 169 VGPTLHFWYLYLSKLVTLPGASGAFLRLLVDQFVFSPIFIGVFLSTLVTLEGRPSEVLPK 228 Query: 119 LQQEWLATVLANWQLWIPFQFLNFLFVPQQFQVLAANFI 3 LQQEW + VLANWQLWIPFQFLNF FVPQQFQVLAAN I Sbjct: 229 LQQEWFSAVLANWQLWIPFQFLNFRFVPQQFQVLAANVI 267 >ref|XP_002323213.1| predicted protein [Populus trichocarpa] gi|222867843|gb|EEF04974.1| predicted protein [Populus trichocarpa] Length = 264 Score = 174 bits (442), Expect = 5e-42 Identities = 82/99 (82%), Positives = 88/99 (88%) Frame = -2 Query: 299 VGPTLHFWYLSLSKMVATPGASGAFLRLLLDQFLFSPIFIGFFLCTLLTLEGRPSQIVPK 120 VGPTLH WYL LSKMV PGASGAFLRLL DQF+FSPIFIG FL TL+TLEGRPSQ++PK Sbjct: 147 VGPTLHIWYLYLSKMVTVPGASGAFLRLLADQFVFSPIFIGVFLSTLVTLEGRPSQVIPK 206 Query: 119 LQQEWLATVLANWQLWIPFQFLNFLFVPQQFQVLAANFI 3 L+QEW + VLANWQLWIPFQFLNF FVPQQFQVLAAN I Sbjct: 207 LKQEWFSAVLANWQLWIPFQFLNFRFVPQQFQVLAANVI 245 >emb|CAN61275.1| hypothetical protein VITISV_033632 [Vitis vinifera] Length = 404 Score = 172 bits (436), Expect = 3e-41 Identities = 81/93 (87%), Positives = 85/93 (91%) Frame = -2 Query: 299 VGPTLHFWYLSLSKMVATPGASGAFLRLLLDQFLFSPIFIGFFLCTLLTLEGRPSQIVPK 120 VGPTLHFWYL LSK+V PGASGAFLRLLLDQFLFSPIFIG FL TL+TLEGRPSQ+VPK Sbjct: 266 VGPTLHFWYLYLSKLVTIPGASGAFLRLLLDQFLFSPIFIGVFLSTLVTLEGRPSQVVPK 325 Query: 119 LQQEWLATVLANWQLWIPFQFLNFLFVPQQFQV 21 LQQEW + VLANWQLWIPFQFLNF FVPQQFQV Sbjct: 326 LQQEWFSAVLANWQLWIPFQFLNFRFVPQQFQV 358 >ref|XP_003554094.1| PREDICTED: protein sym-1-like [Glycine max] Length = 277 Score = 169 bits (427), Expect = 3e-40 Identities = 80/99 (80%), Positives = 87/99 (87%) Frame = -2 Query: 299 VGPTLHFWYLSLSKMVATPGASGAFLRLLLDQFLFSPIFIGFFLCTLLTLEGRPSQIVPK 120 VGPTLHFWYL LSK+V PGASGA LRL+LDQFLFSPIFIG FL TL+TLEG PS+ VPK Sbjct: 160 VGPTLHFWYLYLSKLVTLPGASGALLRLVLDQFLFSPIFIGVFLSTLVTLEGNPSRAVPK 219 Query: 119 LQQEWLATVLANWQLWIPFQFLNFLFVPQQFQVLAANFI 3 L+QEW + VLANW+LWIPFQFLNF FVPQQFQVLAAN I Sbjct: 220 LKQEWFSAVLANWKLWIPFQFLNFRFVPQQFQVLAANVI 258