BLASTX nr result

ID: Coptis24_contig00029198 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029198
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278511.1| PREDICTED: protein sym-1 [Vitis vinifera] gi...   180   1e-43
ref|XP_002308859.1| predicted protein [Populus trichocarpa] gi|2...   176   2e-42
ref|XP_002323213.1| predicted protein [Populus trichocarpa] gi|2...   174   5e-42
emb|CAN61275.1| hypothetical protein VITISV_033632 [Vitis vinifera]   172   3e-41
ref|XP_003554094.1| PREDICTED: protein sym-1-like [Glycine max]       169   3e-40

>ref|XP_002278511.1| PREDICTED: protein sym-1 [Vitis vinifera]
           gi|297741716|emb|CBI32848.3| unnamed protein product
           [Vitis vinifera]
          Length = 293

 Score =  180 bits (456), Expect = 1e-43
 Identities = 85/99 (85%), Positives = 90/99 (90%)
 Frame = -2

Query: 299 VGPTLHFWYLSLSKMVATPGASGAFLRLLLDQFLFSPIFIGFFLCTLLTLEGRPSQIVPK 120
           VGPTLHFWYL LSK+V  PGASGAFLRLLLDQFLFSPIFIG FL TL+TLEGRPSQ+VPK
Sbjct: 176 VGPTLHFWYLYLSKLVTIPGASGAFLRLLLDQFLFSPIFIGVFLSTLVTLEGRPSQVVPK 235

Query: 119 LQQEWLATVLANWQLWIPFQFLNFLFVPQQFQVLAANFI 3
           LQQEW + VLANWQLWIPFQFLNF FVPQQFQVLAAN +
Sbjct: 236 LQQEWFSAVLANWQLWIPFQFLNFRFVPQQFQVLAANVV 274


>ref|XP_002308859.1| predicted protein [Populus trichocarpa] gi|222854835|gb|EEE92382.1|
           predicted protein [Populus trichocarpa]
          Length = 286

 Score =  176 bits (445), Expect = 2e-42
 Identities = 82/99 (82%), Positives = 90/99 (90%)
 Frame = -2

Query: 299 VGPTLHFWYLSLSKMVATPGASGAFLRLLLDQFLFSPIFIGFFLCTLLTLEGRPSQIVPK 120
           VGPTLHFWYL LSK+V  PGASGAFLRLL+DQF+FSPIFIG FL TL+TLEGRPS+++PK
Sbjct: 169 VGPTLHFWYLYLSKLVTLPGASGAFLRLLVDQFVFSPIFIGVFLSTLVTLEGRPSEVLPK 228

Query: 119 LQQEWLATVLANWQLWIPFQFLNFLFVPQQFQVLAANFI 3
           LQQEW + VLANWQLWIPFQFLNF FVPQQFQVLAAN I
Sbjct: 229 LQQEWFSAVLANWQLWIPFQFLNFRFVPQQFQVLAANVI 267


>ref|XP_002323213.1| predicted protein [Populus trichocarpa] gi|222867843|gb|EEF04974.1|
           predicted protein [Populus trichocarpa]
          Length = 264

 Score =  174 bits (442), Expect = 5e-42
 Identities = 82/99 (82%), Positives = 88/99 (88%)
 Frame = -2

Query: 299 VGPTLHFWYLSLSKMVATPGASGAFLRLLLDQFLFSPIFIGFFLCTLLTLEGRPSQIVPK 120
           VGPTLH WYL LSKMV  PGASGAFLRLL DQF+FSPIFIG FL TL+TLEGRPSQ++PK
Sbjct: 147 VGPTLHIWYLYLSKMVTVPGASGAFLRLLADQFVFSPIFIGVFLSTLVTLEGRPSQVIPK 206

Query: 119 LQQEWLATVLANWQLWIPFQFLNFLFVPQQFQVLAANFI 3
           L+QEW + VLANWQLWIPFQFLNF FVPQQFQVLAAN I
Sbjct: 207 LKQEWFSAVLANWQLWIPFQFLNFRFVPQQFQVLAANVI 245


>emb|CAN61275.1| hypothetical protein VITISV_033632 [Vitis vinifera]
          Length = 404

 Score =  172 bits (436), Expect = 3e-41
 Identities = 81/93 (87%), Positives = 85/93 (91%)
 Frame = -2

Query: 299 VGPTLHFWYLSLSKMVATPGASGAFLRLLLDQFLFSPIFIGFFLCTLLTLEGRPSQIVPK 120
           VGPTLHFWYL LSK+V  PGASGAFLRLLLDQFLFSPIFIG FL TL+TLEGRPSQ+VPK
Sbjct: 266 VGPTLHFWYLYLSKLVTIPGASGAFLRLLLDQFLFSPIFIGVFLSTLVTLEGRPSQVVPK 325

Query: 119 LQQEWLATVLANWQLWIPFQFLNFLFVPQQFQV 21
           LQQEW + VLANWQLWIPFQFLNF FVPQQFQV
Sbjct: 326 LQQEWFSAVLANWQLWIPFQFLNFRFVPQQFQV 358


>ref|XP_003554094.1| PREDICTED: protein sym-1-like [Glycine max]
          Length = 277

 Score =  169 bits (427), Expect = 3e-40
 Identities = 80/99 (80%), Positives = 87/99 (87%)
 Frame = -2

Query: 299 VGPTLHFWYLSLSKMVATPGASGAFLRLLLDQFLFSPIFIGFFLCTLLTLEGRPSQIVPK 120
           VGPTLHFWYL LSK+V  PGASGA LRL+LDQFLFSPIFIG FL TL+TLEG PS+ VPK
Sbjct: 160 VGPTLHFWYLYLSKLVTLPGASGALLRLVLDQFLFSPIFIGVFLSTLVTLEGNPSRAVPK 219

Query: 119 LQQEWLATVLANWQLWIPFQFLNFLFVPQQFQVLAANFI 3
           L+QEW + VLANW+LWIPFQFLNF FVPQQFQVLAAN I
Sbjct: 220 LKQEWFSAVLANWKLWIPFQFLNFRFVPQQFQVLAANVI 258


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