BLASTX nr result

ID: Coptis24_contig00029193 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029193
         (584 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002334089.1| predicted protein [Populus trichocarpa] gi|2...   101   8e-20
ref|XP_002329064.1| predicted protein [Populus trichocarpa] gi|2...    81   1e-13
gb|ACN32036.1| unknown [Zea mays]                                      80   2e-13
ref|XP_002330141.1| predicted protein [Populus trichocarpa] gi|2...    79   4e-13
emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera]    79   4e-13

>ref|XP_002334089.1| predicted protein [Populus trichocarpa] gi|222839595|gb|EEE77932.1|
           predicted protein [Populus trichocarpa]
          Length = 385

 Score =  101 bits (252), Expect = 8e-20
 Identities = 50/129 (38%), Positives = 83/129 (64%), Gaps = 4/129 (3%)
 Frame = -3

Query: 561 TSQAIWSSLRRHFAQQSTANAANMRFQLYSLSRGTQTVSQYMQEAKTLSDSLAAIGQPVH 382
           TS+AIW  L RHF+Q+S A+A N++ QL  L++GTQ+V  Y++ AK+++D+L +I +PV 
Sbjct: 101 TSKAIWDCLERHFSQKSVASATNLKMQLLDLNKGTQSVDTYLRHAKSIADALISINKPVP 160

Query: 381 NRELVTNIMRGLGSEFHTIVTTILNGGELPEYEDLRALLLTYETQITHSTPTSTPAAFLS 202
           + +LV   + GLG ++  + T +     LP++ +LRA +L+++ Q   S P  +P A   
Sbjct: 161 DEDLVIATLHGLGPDYLMLRTVLTQNPPLPDFTELRARILSFDAQ--QSRPADSPTAIAL 218

Query: 201 YN----PST 187
           +N    PST
Sbjct: 219 FNHHQTPST 227


>ref|XP_002329064.1| predicted protein [Populus trichocarpa] gi|222839735|gb|EEE78058.1|
           predicted protein [Populus trichocarpa]
          Length = 270

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 40/120 (33%), Positives = 70/120 (58%)
 Frame = -3

Query: 564 TTSQAIWSSLRRHFAQQSTANAANMRFQLYSLSRGTQTVSQYMQEAKTLSDSLAAIGQPV 385
           TTS+ +W +L  +F+  S A    +R QL +  +G  T +++    K ++D LA  GQP+
Sbjct: 113 TTSREVWLALENNFSSLSRAKVIQIRTQLANAKKGAMTANEFFLSVKRMADELALAGQPL 172

Query: 384 HNRELVTNIMRGLGSEFHTIVTTILNGGELPEYEDLRALLLTYETQITHSTPTSTPAAFL 205
            N +++T I+ GLG E+ ++ +TI +  +    E+L +LLL  E++I H+     P+A L
Sbjct: 173 PNDDIITYILAGLGQEYDSLASTISSRRDPVSLEELFSLLLICESRINHNNQPLLPSANL 232


>gb|ACN32036.1| unknown [Zea mays]
          Length = 376

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 38/117 (32%), Positives = 73/117 (62%)
 Frame = -3

Query: 582 ALLSDITTSQAIWSSLRRHFAQQSTANAANMRFQLYSLSRGTQTVSQYMQEAKTLSDSLA 403
           A + D TT++  WS+L R +A  S A    +R QL ++ +G  T ++Y ++ K L+D+LA
Sbjct: 109 ATVVDATTARGAWSTLERMYASSSRARIMQIRMQLATIQKGDLTAAEYFRKVKRLADTLA 168

Query: 402 AIGQPVHNRELVTNIMRGLGSEFHTIVTTILNGGELPEYEDLRALLLTYETQITHST 232
           A+G+ + + E ++ ++RGL +++ ++VT+I    +     D+ A LL++ET+  + T
Sbjct: 169 AVGKRLEDEEFISYLLRGLPADYDSLVTSITTRPDTYTISDVYAHLLSFETRQEYHT 225


>ref|XP_002330141.1| predicted protein [Populus trichocarpa] gi|222871275|gb|EEF08406.1|
           predicted protein [Populus trichocarpa]
          Length = 443

 Score = 79.3 bits (194), Expect = 4e-13
 Identities = 41/115 (35%), Positives = 70/115 (60%), Gaps = 4/115 (3%)
 Frame = -3

Query: 519 QQSTANAANMRFQLYSLSRGTQTVSQYMQEAKTLSDSLAAIGQPVHNRELVTNIMRGLGS 340
           Q S A+A N++ QL  L++GTQ+V  Y++ AK+++D+L +I +PV + +LV   + GLG 
Sbjct: 79  QISVASATNLKMQLLDLNKGTQSVDTYLRHAKSIADALISINKPVPDEDLVIATLHGLGP 138

Query: 339 EFHTIVTTILNGGELPEYEDLRALLLTYETQITHSTPTSTPAAFLSYN----PST 187
            +  + T +     LP++ +LRA +L+++ Q   S P  +P A   +N    PST
Sbjct: 139 NYLMLRTVLTQNPPLPDFTELRARILSFDAQ--QSRPADSPTAIALFNHHQTPST 191


>emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera]
          Length = 1171

 Score = 79.3 bits (194), Expect = 4e-13
 Identities = 45/133 (33%), Positives = 81/133 (60%), Gaps = 5/133 (3%)
 Frame = -3

Query: 567 ITTSQAIWSSLRRHFAQQSTANAANMRFQLYSLSRGTQTVSQYMQEAKTLSDSLAAIGQP 388
           + TS+ +W++L+  F+ QS +  ++++ QL +L++GT++ S+Y++ AKTL+D LAA G+P
Sbjct: 100 LETSKQVWTALQTRFSSQSRSRISHLKRQLQTLTQGTKSCSEYLESAKTLADQLAAAGKP 159

Query: 387 VHNRELVTNIMRGLGSEFHTIVTTILNGGELPE--YEDLRALLLTYET--QITHST-PTS 223
           V +++L++ ++ GL S +   VT+        +  +ED +A LL YE    + HS   T 
Sbjct: 160 VDDQDLISFLLGGLQSSYTPFVTSFNFASRETDFTFEDFQAELLGYENLLDVNHSVHNTD 219

Query: 222 TPAAFLSYNPSTA 184
            P    + N S A
Sbjct: 220 GPHFAFAANKSKA 232


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