BLASTX nr result

ID: Coptis24_contig00029168 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029168
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2...    60   1e-07
ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|2...    60   1e-07
ref|XP_002319850.1| predicted protein [Populus trichocarpa] gi|2...    60   1e-07
ref|XP_002333406.1| predicted protein [Populus trichocarpa] gi|2...    59   3e-07
ref|XP_002331734.1| predicted protein [Populus trichocarpa] gi|2...    59   4e-07

>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
           predicted protein [Populus trichocarpa]
          Length = 1386

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
 Frame = -2

Query: 296 PVSILEEGVELWKDHVVGFFIEKRLSYPFVKAAVTKQWKLKGGSDMI-ADKDLFYFKFFN 120
           P+ + E+G E WK  +VG F+ ++L YP V +   + W   G S+++ +D   F F F +
Sbjct: 142 PLDVFEDGCEFWKSTLVGHFVGQKLPYPVVNSIAKRIWSSYGLSEVLSSDNGFFIFNFDS 201

Query: 119 DEDRQTVIDHGPLFLAGRIFVARAWSP 39
            +    V++  P  +A R  V + W P
Sbjct: 202 VDHATNVLERAPWHMANRPLVLKRWQP 228


>ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|222870351|gb|EEF07482.1|
           predicted protein [Populus trichocarpa]
          Length = 1046

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
 Frame = -2

Query: 296 PVSILEEGVELWKDHVVGFFIEKRLSYPFVKAAVTKQWKLKGGSDMI-ADKDLFYFKFFN 120
           P+ + E+G E WK  +VG F+ ++L YP V +   + W   G S+++ +D   F F F +
Sbjct: 142 PLDVFEDGCEFWKSTLVGHFVGQKLPYPVVNSIAKRIWSSYGLSEVLSSDNGFFIFNFDS 201

Query: 119 DEDRQTVIDHGPLFLAGRIFVARAWSP 39
            +    V++  P  +A R  V + W P
Sbjct: 202 VDHATNVLERAPWHMANRPLVLKRWQP 228


>ref|XP_002319850.1| predicted protein [Populus trichocarpa] gi|222858226|gb|EEE95773.1|
           predicted protein [Populus trichocarpa]
          Length = 809

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
 Frame = -2

Query: 296 PVSILEEGVELWKDHVVGFFIEKRLSYPFVKAAVTKQWKLKGGSDMI-ADKDLFYFKFFN 120
           P+ + E+G E WK  +VG F+ ++L YP V +   + W   G S+++ +D   F F F +
Sbjct: 142 PLDVFEDGCEFWKSTLVGHFVGQKLPYPVVNSIAKRIWSSYGLSEVLSSDNGFFIFNFDS 201

Query: 119 DEDRQTVIDHGPLFLAGRIFVARAWSP 39
            +    V++  P  +A R  V + W P
Sbjct: 202 VDHATNVLERAPWHMANRPLVLKRWQP 228


>ref|XP_002333406.1| predicted protein [Populus trichocarpa] gi|222836432|gb|EEE74839.1|
           predicted protein [Populus trichocarpa]
          Length = 1166

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
 Frame = -2

Query: 296 PVSILEEGVELWKDHVVGFFIEKRLSYPFVKAAVTKQWKLKGGSDMI-ADKDLFYFKFFN 120
           P+ + E+G E WK  +VG F+ ++L YP V +   + W   G S+++ +D   F F F  
Sbjct: 142 PLDVFEDGCEFWKSTLVGHFVGQKLPYPVVNSIAKRIWSSYGLSEVLSSDNGFFIFNFDY 201

Query: 119 DEDRQTVIDHGPLFLAGRIFVARAWSP 39
            +    V++  P  +A R  V + W P
Sbjct: 202 VDHATNVLERAPWHMANRPLVLKRWQP 228



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
 Frame = -2

Query: 296  PVSILEEGVELWKDHVVGFFIEKRLSYPFVKAAVTKQWKLKGGSDMI-ADKDLFYFKFFN 120
            P+ + E+G E WK  +VG F+ ++L YP V +   + W   G S+++ +D   F F F  
Sbjct: 935  PLDVFEDGCEFWKSTLVGHFVGQKLPYPVVNSIAKRIWSSYGLSEVLSSDNGFFIFNFDY 994

Query: 119  DEDRQTVIDHGPLFLAGRIFVARAWSP 39
             +    V++  P  +A R  V + W P
Sbjct: 995  VDHATNVLERAPWHMANRPLVLKRWQP 1021


>ref|XP_002331734.1| predicted protein [Populus trichocarpa] gi|222874137|gb|EEF11268.1|
           predicted protein [Populus trichocarpa]
          Length = 557

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
 Frame = -2

Query: 296 PVSILEEGVELWKDHVVGFFIEKRLSYPFVKAAVTKQWKLKGGSDMI-ADKDLFYFKFFN 120
           P+ + E+G E WK  +VG F+ ++L YP V +   + W   G S+++ +D   F F F  
Sbjct: 116 PLDVFEDGCEFWKSTLVGHFVGQKLPYPVVNSIAKRIWSSYGLSEVLSSDNGFFIFNFDF 175

Query: 119 DEDRQTVIDHGPLFLAGRIFVARAWSP 39
            +    V++  P  +A R  V + W P
Sbjct: 176 VDHATNVLERAPWHMANRPLVLKRWQP 202


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