BLASTX nr result

ID: Coptis24_contig00029164 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029164
         (623 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17712.3| unnamed protein product [Vitis vinifera]              136   3e-30
ref|XP_002268929.1| PREDICTED: uncharacterized protein LOC100254...   136   3e-30
emb|CAN75558.1| hypothetical protein VITISV_028190 [Vitis vinifera]   134   1e-29
ref|XP_004142772.1| PREDICTED: uncharacterized protein LOC101217...   119   3e-25
ref|XP_003553886.1| PREDICTED: uncharacterized protein LOC100811...   119   3e-25

>emb|CBI17712.3| unnamed protein product [Vitis vinifera]
          Length = 318

 Score =  136 bits (342), Expect = 3e-30
 Identities = 95/202 (47%), Positives = 114/202 (56%), Gaps = 22/202 (10%)
 Frame = -3

Query: 597 SCEPSIAYA--------SKSWLERSALRGGKNVERDLSEEKWVCF--------EEVTSCV 466
           S  PS+ YA          S L R+ALR   N ERD SEEKWV +        EEVTSC 
Sbjct: 131 SLSPSLTYAYGGQDSEEGASTLVRAALR---NRERDASEEKWVSYSEVVEKKEEEVTSCA 187

Query: 465 PEIXXXXXXXXXXXXLDYDEIMNAWSDKGPLYLDHVDGELGSHIVPDVLHDLLQHTPNQV 286
            ++            LDY EI+NAWS KGPL+   ++GE     VPD+ HD         
Sbjct: 188 ADLWYKNHTQRLSLKLDYQEILNAWSGKGPLF---IEGE-SPQTVPDLAHDAAN------ 237

Query: 285 SMDAGMVPLLRVHDDGSSVIDGIEMD------AWKLRTREARLLRYKEKRQSRLFSKRIR 124
           +M  G   + +V + G S    ++M+        K   R+A +LRYKEKRQSRLFSKRIR
Sbjct: 238 AMGDGWSGVWKVPEMGGSR-SSMKMEEVGGGEGSKKGQRQASVLRYKEKRQSRLFSKRIR 296

Query: 123 YEVRKLNAEKRPRMKGRFVKRS 58
           YEVRKLNAEKRPRMKGRFVKRS
Sbjct: 297 YEVRKLNAEKRPRMKGRFVKRS 318


>ref|XP_002268929.1| PREDICTED: uncharacterized protein LOC100254358 [Vitis vinifera]
          Length = 310

 Score =  136 bits (342), Expect = 3e-30
 Identities = 95/202 (47%), Positives = 114/202 (56%), Gaps = 22/202 (10%)
 Frame = -3

Query: 597 SCEPSIAYA--------SKSWLERSALRGGKNVERDLSEEKWVCF--------EEVTSCV 466
           S  PS+ YA          S L R+ALR   N ERD SEEKWV +        EEVTSC 
Sbjct: 123 SLSPSLTYAYGGQDSEEGASTLVRAALR---NRERDASEEKWVSYSEVVEKKEEEVTSCA 179

Query: 465 PEIXXXXXXXXXXXXLDYDEIMNAWSDKGPLYLDHVDGELGSHIVPDVLHDLLQHTPNQV 286
            ++            LDY EI+NAWS KGPL+   ++GE     VPD+ HD         
Sbjct: 180 ADLWYKNHTQRLSLKLDYQEILNAWSGKGPLF---IEGE-SPQTVPDLAHDAAN------ 229

Query: 285 SMDAGMVPLLRVHDDGSSVIDGIEMD------AWKLRTREARLLRYKEKRQSRLFSKRIR 124
           +M  G   + +V + G S    ++M+        K   R+A +LRYKEKRQSRLFSKRIR
Sbjct: 230 AMGDGWSGVWKVPEMGGSR-SSMKMEEVGGGEGSKKGQRQASVLRYKEKRQSRLFSKRIR 288

Query: 123 YEVRKLNAEKRPRMKGRFVKRS 58
           YEVRKLNAEKRPRMKGRFVKRS
Sbjct: 289 YEVRKLNAEKRPRMKGRFVKRS 310


>emb|CAN75558.1| hypothetical protein VITISV_028190 [Vitis vinifera]
          Length = 310

 Score =  134 bits (337), Expect = 1e-29
 Identities = 94/202 (46%), Positives = 113/202 (55%), Gaps = 22/202 (10%)
 Frame = -3

Query: 597 SCEPSIAYA--------SKSWLERSALRGGKNVERDLSEEKWVCF--------EEVTSCV 466
           S  PS+ YA          S L R+ALR   N ERD SEEKWV +        EEVTSC 
Sbjct: 123 SLSPSLTYAYGGQDSEEGASTLVRAALR---NRERDASEEKWVSYSEVVEKKEEEVTSCA 179

Query: 465 PEIXXXXXXXXXXXXLDYDEIMNAWSDKGPLYLDHVDGELGSHIVPDVLHDLLQHTPNQV 286
            ++            LDY EI+NAWS KGPL+   ++GE     VPD+ HD         
Sbjct: 180 ADLWYKNHTQRLSLKLDYQEILNAWSGKGPLF---IEGE-SPQTVPDLAHDAAN------ 229

Query: 285 SMDAGMVPLLRVHDDGSSVIDGIEMD------AWKLRTREARLLRYKEKRQSRLFSKRIR 124
           +M  G   + +V + G S    ++M+        K   R+A +LRYKEKRQ RLFSKRIR
Sbjct: 230 AMGDGWSGVWKVPEMGGSR-SSMKMEEVGGGEGSKKGQRQASVLRYKEKRQXRLFSKRIR 288

Query: 123 YEVRKLNAEKRPRMKGRFVKRS 58
           YEVRKLNAEKRPRMKGRFVKRS
Sbjct: 289 YEVRKLNAEKRPRMKGRFVKRS 310


>ref|XP_004142772.1| PREDICTED: uncharacterized protein LOC101217596 [Cucumis sativus]
          Length = 322

 Score =  119 bits (299), Expect = 3e-25
 Identities = 92/224 (41%), Positives = 115/224 (51%), Gaps = 43/224 (19%)
 Frame = -3

Query: 600 SSCEPSIAYASKSWLERSALRGGKNVERDLS-EEKWVCF--------EEVTSCVPE---- 460
           SS E S     ++ L R+A+R   N ER+   EEKWVC+        EEVTS   +    
Sbjct: 104 SSEEESRNLVEEAELVRTAMR---NRERETGVEEKWVCYSEVVEKKEEEVTSTAADEWVK 160

Query: 459 -----------IXXXXXXXXXXXXLDYDEIMNAWSDKGPLYLD----------HVD---- 355
                      I            LDY+ I+NAW DK PL+++          H D    
Sbjct: 161 KVKMMKKKKKKIKMEMIGKQLWLKLDYEGILNAWPDKAPLFINGESPQTVPDLHDDPYLC 220

Query: 354 -GELGSHIVPDVL----HDLLQHTPNQVSMDAGMVPLLRVHDDGSSVIDGIEMDAWKLRT 190
              L S  V D +    H+   +T N  S +   VP + +      +++G E   WK+  
Sbjct: 221 SDSLLSRNVMDGIGSEGHNSSNNTNNNSSSNVWKVPEIGIMKKEELILEGKE--GWKMGQ 278

Query: 189 REARLLRYKEKRQSRLFSKRIRYEVRKLNAEKRPRMKGRFVKRS 58
           REA +LRYKEKRQSRLFSKRIRYEVRKLNAEKRPRMKGRFVKRS
Sbjct: 279 REASVLRYKEKRQSRLFSKRIRYEVRKLNAEKRPRMKGRFVKRS 322


>ref|XP_003553886.1| PREDICTED: uncharacterized protein LOC100811815 [Glycine max]
          Length = 349

 Score =  119 bits (299), Expect = 3e-25
 Identities = 83/190 (43%), Positives = 104/190 (54%), Gaps = 22/190 (11%)
 Frame = -3

Query: 564 SWLERSALRGGKNVERDLSEEKWVCFEEVTSCVPEIXXXXXXXXXXXXL----------- 418
           +WL R A+R  ++ E   SEE+WVC+ EV     E                         
Sbjct: 162 NWLVRKAMRRRESEEG--SEERWVCYSEVVEEKKEAMEEVTSYSVKGETKTTSFGFGLLS 219

Query: 417 ---DYDEIMNAWSDKGPLYLDHVDGELGSHIVPDVLHDLLQHTP--NQVSMDA----GMV 265
              D+  I+NAWSDKG LY+   + E     VPD+ +  L H      V+ D     G+V
Sbjct: 220 LKLDHQGILNAWSDKGSLYVAGEE-EGALQTVPDIFNGFLFHNAVAPHVAWDGWGSGGVV 278

Query: 264 P-LLRVHDD-GSSVIDGIEMDAWKLRTREARLLRYKEKRQSRLFSKRIRYEVRKLNAEKR 91
                VH++ G++  +  E  +WKL  REA + RYKEKRQSRLFSKRIRYEVRKLNAEKR
Sbjct: 279 GNAWSVHEECGANKANVKEETSWKLAQREASVQRYKEKRQSRLFSKRIRYEVRKLNAEKR 338

Query: 90  PRMKGRFVKR 61
           PRMKGRFVKR
Sbjct: 339 PRMKGRFVKR 348


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