BLASTX nr result

ID: Coptis24_contig00029160 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029160
         (372 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307173.1| predicted protein [Populus trichocarpa] gi|2...   195   3e-48
ref|XP_002527141.1| protein binding protein, putative [Ricinus c...   192   2e-47
emb|CBI27138.3| unnamed protein product [Vitis vinifera]              192   2e-47
gb|EEE61898.1| hypothetical protein OsJ_16607 [Oryza sativa Japo...   192   2e-47
emb|CAJ86102.1| H0103C06.6 [Oryza sativa Indica Group] gi|125550...   192   2e-47

>ref|XP_002307173.1| predicted protein [Populus trichocarpa] gi|222856622|gb|EEE94169.1|
           predicted protein [Populus trichocarpa]
          Length = 2870

 Score =  195 bits (496), Expect = 3e-48
 Identities = 94/123 (76%), Positives = 105/123 (85%)
 Frame = -2

Query: 371 SRIGAFAATAAKDYDIHLLPWASVAACLSDSAAEVDILQHGRAFCFLPLPLRTGLNVQVN 192
           SRIG FAATA+KDYDIHLLPWASVAACL+D  ++ D L+ GRAFCFLPLP+RTGLNVQVN
Sbjct: 334 SRIGEFAATASKDYDIHLLPWASVAACLTDGLSDNDELKLGRAFCFLPLPVRTGLNVQVN 393

Query: 191 GYFEVSSNRRSIWYGADMDRGGKLRSDWNRLLLVDVVAPLFVKLLLGLRSLVNPSGLYYS 12
           GYFEVSSNRR IWYGADMDR GK+RS WNRLLL DVVAP F  LLLG++ L+  +  YYS
Sbjct: 394 GYFEVSSNRRGIWYGADMDRSGKIRSIWNRLLLEDVVAPAFRYLLLGVQQLLGSTDSYYS 453

Query: 11  LWP 3
           LWP
Sbjct: 454 LWP 456



 Score =  103 bits (256), Expect = 2e-20
 Identities = 60/149 (40%), Positives = 79/149 (53%), Gaps = 27/149 (18%)
 Frame = -2

Query: 368  RIGAFAATAAKDYDIHLLPWASVAA---------------------CLSD----SAAEVD 264
            R   F A A   ++   +PWASVAA                     C S+    S   ++
Sbjct: 1720 RAKTFTAVANDSHES--IPWASVAAYIHSVKVMDGELSDISNIEGACTSETFQVSTTSIE 1777

Query: 263  ILQH--GRAFCFLPLPLRTGLNVQVNGYFEVSSNRRSIWYGADMDRGGKLRSDWNRLLLV 90
              ++  GRAFCFLPLP+ TG+   +N YF +SSNRR IW+G DM  GGK RSDWN  +L 
Sbjct: 1778 NRKNFEGRAFCFLPLPISTGVPAHINSYFALSSNRRDIWFGNDMAGGGKKRSDWNIYILE 1837

Query: 89   DVVAPLFVKLLLGLRSLVNPSGLYYSLWP 3
            DV AP +  LL  + S + P  L++S WP
Sbjct: 1838 DVAAPAYGYLLEKIASEIGPCDLFFSFWP 1866


>ref|XP_002527141.1| protein binding protein, putative [Ricinus communis]
           gi|223533501|gb|EEF35243.1| protein binding protein,
           putative [Ricinus communis]
          Length = 4704

 Score =  192 bits (489), Expect = 2e-47
 Identities = 92/123 (74%), Positives = 105/123 (85%)
 Frame = -2

Query: 371 SRIGAFAATAAKDYDIHLLPWASVAACLSDSAAEVDILQHGRAFCFLPLPLRTGLNVQVN 192
           SRI +FAATA+K+YDIHLLPWASVAAC+SD  ++ D L+ GRAFCFLPLP+RTGLNVQVN
Sbjct: 326 SRIASFAATASKEYDIHLLPWASVAACISDGLSDNDDLKLGRAFCFLPLPVRTGLNVQVN 385

Query: 191 GYFEVSSNRRSIWYGADMDRGGKLRSDWNRLLLVDVVAPLFVKLLLGLRSLVNPSGLYYS 12
           GYFEVSSNRR IWYGADMDR GK+RS WNRLLL DVVAP F  LLLG++ L+  +  YYS
Sbjct: 386 GYFEVSSNRRGIWYGADMDRSGKVRSIWNRLLLEDVVAPAFKYLLLGVQGLLGSTDSYYS 445

Query: 11  LWP 3
           LWP
Sbjct: 446 LWP 448



 Score =  107 bits (266), Expect = 1e-21
 Identities = 59/142 (41%), Positives = 76/142 (53%), Gaps = 25/142 (17%)
 Frame = -2

Query: 353  AATAAKDYDIHLLPWASVAA-------------------CLSDS--AAEVDILQH----G 249
            ++T A       +PWA VAA                   C SD    +E  + Q     G
Sbjct: 1715 SSTVANHKSHKSIPWACVAAYIQSIKRDGESSDILNTEACTSDMFLVSEASVQQRKNFEG 1774

Query: 248  RAFCFLPLPLRTGLNVQVNGYFEVSSNRRSIWYGADMDRGGKLRSDWNRLLLVDVVAPLF 69
            RAFCFLPLP+ TGL   +N YFE+SSNRR IW+G DM  GGK RSDWN  +L +V+AP +
Sbjct: 1775 RAFCFLPLPINTGLPTHINSYFELSSNRRDIWFGNDMAGGGKKRSDWNMYILENVIAPAY 1834

Query: 68   VKLLLGLRSLVNPSGLYYSLWP 3
              LL  +   + P  L++S WP
Sbjct: 1835 GHLLEKIALEIGPCDLFFSYWP 1856


>emb|CBI27138.3| unnamed protein product [Vitis vinifera]
          Length = 3960

 Score =  192 bits (488), Expect = 2e-47
 Identities = 88/123 (71%), Positives = 108/123 (87%)
 Frame = -2

Query: 371 SRIGAFAATAAKDYDIHLLPWASVAACLSDSAAEVDILQHGRAFCFLPLPLRTGLNVQVN 192
           S+IG+FAATA+K+YDIHLLPWASVAAC+S+ ++  ++L+ GRAFCFLPLP+RTG+ VQVN
Sbjct: 330 SKIGSFAATASKEYDIHLLPWASVAACVSNDSSNDNVLKLGRAFCFLPLPVRTGMTVQVN 389

Query: 191 GYFEVSSNRRSIWYGADMDRGGKLRSDWNRLLLVDVVAPLFVKLLLGLRSLVNPSGLYYS 12
           GYFEVSSNRR IWYG DMDR GK+RS WNRLLL +VVAP F++LLLG++ L+ P  LYYS
Sbjct: 390 GYFEVSSNRRGIWYGDDMDRSGKIRSMWNRLLLEEVVAPSFIQLLLGVQRLLGPEKLYYS 449

Query: 11  LWP 3
           LWP
Sbjct: 450 LWP 452



 Score =  109 bits (273), Expect = 2e-22
 Identities = 57/107 (53%), Positives = 69/107 (64%)
 Frame = -2

Query: 323  HLLPWASVAACLSDSAAEVDILQHGRAFCFLPLPLRTGLNVQVNGYFEVSSNRRSIWYGA 144
            +L+PWA VAA L  S    +    GRAFCFLPLP+ TGL   VN YFE+SSNRR IW+G 
Sbjct: 1167 NLIPWACVAAYLH-SVKNFE----GRAFCFLPLPISTGLPAHVNAYFELSSNRRDIWFGN 1221

Query: 143  DMDRGGKLRSDWNRLLLVDVVAPLFVKLLLGLRSLVNPSGLYYSLWP 3
            DM  GGK RS+WN  LL DV AP +  LL  +   + P  L++S WP
Sbjct: 1222 DMAGGGKKRSEWNIYLLEDVAAPAYGHLLEKIALELGPCDLFFSFWP 1268


>gb|EEE61898.1| hypothetical protein OsJ_16607 [Oryza sativa Japonica Group]
          Length = 4635

 Score =  192 bits (488), Expect = 2e-47
 Identities = 92/123 (74%), Positives = 105/123 (85%)
 Frame = -2

Query: 371 SRIGAFAATAAKDYDIHLLPWASVAACLSDSAAEVDILQHGRAFCFLPLPLRTGLNVQVN 192
           S+IG FA TAAKDYD+HLLPWASVAAC+S+   E  IL+ GRAFCFLPLP++TGL+V VN
Sbjct: 322 SKIGIFATTAAKDYDLHLLPWASVAACISNVGPEEVILRQGRAFCFLPLPVKTGLSVHVN 381

Query: 191 GYFEVSSNRRSIWYGADMDRGGKLRSDWNRLLLVDVVAPLFVKLLLGLRSLVNPSGLYYS 12
           GYFEVSSNRR IWYGADMDRGGKLRSDWN LLL DVVAPLF +LLL LR++++    YYS
Sbjct: 382 GYFEVSSNRRDIWYGADMDRGGKLRSDWNMLLLEDVVAPLFRELLLQLRTVLDSKISYYS 441

Query: 11  LWP 3
           LWP
Sbjct: 442 LWP 444



 Score =  105 bits (262), Expect = 4e-21
 Identities = 60/143 (41%), Positives = 75/143 (52%), Gaps = 27/143 (18%)
 Frame = -2

Query: 350  ATAAKDYDIHLLPWASVAACLSD----------SAAEVDI-----------------LQH 252
            +TA+       +PWASVAA L              AEV++                    
Sbjct: 1713 STASGSKSHFFVPWASVAAYLHSVTVDNTKELSGEAEVNLDDLVLKQLSLGSSKDRKFFE 1772

Query: 251  GRAFCFLPLPLRTGLNVQVNGYFEVSSNRRSIWYGADMDRGGKLRSDWNRLLLVDVVAPL 72
            GRAFCFLPLP+ T + V VN YFE+SSNRR IW G DM  GG++RS+WN  LL DV AP 
Sbjct: 1773 GRAFCFLPLPINTSMPVHVNAYFELSSNRRDIWIGNDMAGGGRVRSEWNLALLEDVAAPA 1832

Query: 71   FVKLLLGLRSLVNPSGLYYSLWP 3
            +  LL  +   + PS L+ S WP
Sbjct: 1833 YGHLLAAIAQELGPSDLFLSFWP 1855


>emb|CAJ86102.1| H0103C06.6 [Oryza sativa Indica Group] gi|125550208|gb|EAY96030.1|
           hypothetical protein OsI_17903 [Oryza sativa Indica
           Group]
          Length = 4737

 Score =  192 bits (488), Expect = 2e-47
 Identities = 92/123 (74%), Positives = 105/123 (85%)
 Frame = -2

Query: 371 SRIGAFAATAAKDYDIHLLPWASVAACLSDSAAEVDILQHGRAFCFLPLPLRTGLNVQVN 192
           S+IG FA TAAKDYD+HLLPWASVAAC+S+   E  IL+ GRAFCFLPLP++TGL+V VN
Sbjct: 322 SKIGIFATTAAKDYDLHLLPWASVAACISNVGPEEVILRQGRAFCFLPLPVKTGLSVHVN 381

Query: 191 GYFEVSSNRRSIWYGADMDRGGKLRSDWNRLLLVDVVAPLFVKLLLGLRSLVNPSGLYYS 12
           GYFEVSSNRR IWYGADMDRGGKLRSDWN LLL DVVAPLF +LLL LR++++    YYS
Sbjct: 382 GYFEVSSNRRDIWYGADMDRGGKLRSDWNMLLLEDVVAPLFRELLLQLRTVLDSKISYYS 441

Query: 11  LWP 3
           LWP
Sbjct: 442 LWP 444



 Score =  105 bits (262), Expect = 4e-21
 Identities = 60/143 (41%), Positives = 75/143 (52%), Gaps = 27/143 (18%)
 Frame = -2

Query: 350  ATAAKDYDIHLLPWASVAACLSD----------SAAEVDI-----------------LQH 252
            +TA+       +PWASVAA L              AEV++                    
Sbjct: 1713 STASGSKSHFFVPWASVAAYLHSVTVDNTKELSGEAEVNLDDLVLKQLSLGSSKDRKFFE 1772

Query: 251  GRAFCFLPLPLRTGLNVQVNGYFEVSSNRRSIWYGADMDRGGKLRSDWNRLLLVDVVAPL 72
            GRAFCFLPLP+ T + V VN YFE+SSNRR IW G DM  GG++RS+WN  LL DV AP 
Sbjct: 1773 GRAFCFLPLPINTSMPVHVNAYFELSSNRRDIWIGNDMAGGGRVRSEWNLALLEDVAAPA 1832

Query: 71   FVKLLLGLRSLVNPSGLYYSLWP 3
            +  LL  +   + PS L+ S WP
Sbjct: 1833 YGHLLAAIAQELGPSDLFLSFWP 1855


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