BLASTX nr result

ID: Coptis24_contig00029153 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029153
         (518 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309727.1| predicted protein [Populus trichocarpa] gi|2...    51   5e-09
ref|XP_002315110.1| predicted protein [Populus trichocarpa] gi|2...    47   9e-09
ref|NP_001182835.1| hypothetical protein [Zea mays] gi|238007524...    47   2e-08
gb|AFW81740.1| hypothetical protein ZEAMMB73_290034 [Zea mays]         47   2e-08
gb|AFW81739.1| hypothetical protein ZEAMMB73_290034 [Zea mays]         47   2e-08

>ref|XP_002309727.1| predicted protein [Populus trichocarpa] gi|222852630|gb|EEE90177.1|
           predicted protein [Populus trichocarpa]
          Length = 750

 Score = 51.2 bits (121), Expect(2) = 5e-09
 Identities = 25/29 (86%), Positives = 26/29 (89%)
 Frame = -2

Query: 517 PEEVAAAAMYLKDTLRKEGVQEFISKLSK 431
           PEEVAAAAMYLKDTL KEG+QE IS LSK
Sbjct: 693 PEEVAAAAMYLKDTLGKEGIQELISNLSK 721



 Score = 33.9 bits (76), Expect(2) = 5e-09
 Identities = 17/31 (54%), Positives = 22/31 (70%)
 Frame = -3

Query: 456 KNLSVNSPKNTEGTILIEDIVRLGSSTED*K 364
           + L  N  K+ +G IL+EDIV+LGS TED K
Sbjct: 713 QELISNLSKDRDGKILVEDIVKLGSWTEDAK 743


>ref|XP_002315110.1| predicted protein [Populus trichocarpa] gi|222864150|gb|EEF01281.1|
           predicted protein [Populus trichocarpa]
          Length = 658

 Score = 47.4 bits (111), Expect(2) = 9e-09
 Identities = 23/29 (79%), Positives = 25/29 (86%)
 Frame = -2

Query: 517 PEEVAAAAMYLKDTLRKEGVQEFISKLSK 431
           PEEVA+AAMYLKD L KEG+QE IS LSK
Sbjct: 604 PEEVASAAMYLKDHLGKEGIQELISNLSK 632



 Score = 37.0 bits (84), Expect(2) = 9e-09
 Identities = 18/29 (62%), Positives = 21/29 (72%)
 Frame = -3

Query: 456 KNLSVNSPKNTEGTILIEDIVRLGSSTED 370
           + L  N  K+TEG IL+EDIVRLGS  ED
Sbjct: 624 QELISNLSKDTEGKILVEDIVRLGSEMED 652


>ref|NP_001182835.1| hypothetical protein [Zea mays] gi|238007524|gb|ACR34797.1| unknown
           [Zea mays] gi|413949092|gb|AFW81741.1| hypothetical
           protein ZEAMMB73_290034 [Zea mays]
          Length = 766

 Score = 47.4 bits (111), Expect(2) = 2e-08
 Identities = 23/29 (79%), Positives = 25/29 (86%)
 Frame = -2

Query: 517 PEEVAAAAMYLKDTLRKEGVQEFISKLSK 431
           PEEVAAAA YLKDT+ KEGVQE I+ LSK
Sbjct: 708 PEEVAAAAAYLKDTIGKEGVQELITNLSK 736



 Score = 36.2 bits (82), Expect(2) = 2e-08
 Identities = 17/29 (58%), Positives = 21/29 (72%)
 Frame = -3

Query: 456 KNLSVNSPKNTEGTILIEDIVRLGSSTED 370
           + L  N  K+TEG IL+EDIVRL S TE+
Sbjct: 728 QELITNLSKDTEGKILVEDIVRLASQTEE 756


>gb|AFW81740.1| hypothetical protein ZEAMMB73_290034 [Zea mays]
          Length = 765

 Score = 47.4 bits (111), Expect(2) = 2e-08
 Identities = 23/29 (79%), Positives = 25/29 (86%)
 Frame = -2

Query: 517 PEEVAAAAMYLKDTLRKEGVQEFISKLSK 431
           PEEVAAAA YLKDT+ KEGVQE I+ LSK
Sbjct: 707 PEEVAAAAAYLKDTIGKEGVQELITNLSK 735



 Score = 36.2 bits (82), Expect(2) = 2e-08
 Identities = 17/29 (58%), Positives = 21/29 (72%)
 Frame = -3

Query: 456 KNLSVNSPKNTEGTILIEDIVRLGSSTED 370
           + L  N  K+TEG IL+EDIVRL S TE+
Sbjct: 727 QELITNLSKDTEGKILVEDIVRLASQTEE 755


>gb|AFW81739.1| hypothetical protein ZEAMMB73_290034 [Zea mays]
          Length = 245

 Score = 47.4 bits (111), Expect(2) = 2e-08
 Identities = 23/29 (79%), Positives = 25/29 (86%)
 Frame = -2

Query: 517 PEEVAAAAMYLKDTLRKEGVQEFISKLSK 431
           PEEVAAAA YLKDT+ KEGVQE I+ LSK
Sbjct: 187 PEEVAAAAAYLKDTIGKEGVQELITNLSK 215



 Score = 36.2 bits (82), Expect(2) = 2e-08
 Identities = 17/29 (58%), Positives = 21/29 (72%)
 Frame = -3

Query: 456 KNLSVNSPKNTEGTILIEDIVRLGSSTED 370
           + L  N  K+TEG IL+EDIVRL S TE+
Sbjct: 207 QELITNLSKDTEGKILVEDIVRLASQTEE 235