BLASTX nr result
ID: Coptis24_contig00029153
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00029153 (518 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002309727.1| predicted protein [Populus trichocarpa] gi|2... 51 5e-09 ref|XP_002315110.1| predicted protein [Populus trichocarpa] gi|2... 47 9e-09 ref|NP_001182835.1| hypothetical protein [Zea mays] gi|238007524... 47 2e-08 gb|AFW81740.1| hypothetical protein ZEAMMB73_290034 [Zea mays] 47 2e-08 gb|AFW81739.1| hypothetical protein ZEAMMB73_290034 [Zea mays] 47 2e-08 >ref|XP_002309727.1| predicted protein [Populus trichocarpa] gi|222852630|gb|EEE90177.1| predicted protein [Populus trichocarpa] Length = 750 Score = 51.2 bits (121), Expect(2) = 5e-09 Identities = 25/29 (86%), Positives = 26/29 (89%) Frame = -2 Query: 517 PEEVAAAAMYLKDTLRKEGVQEFISKLSK 431 PEEVAAAAMYLKDTL KEG+QE IS LSK Sbjct: 693 PEEVAAAAMYLKDTLGKEGIQELISNLSK 721 Score = 33.9 bits (76), Expect(2) = 5e-09 Identities = 17/31 (54%), Positives = 22/31 (70%) Frame = -3 Query: 456 KNLSVNSPKNTEGTILIEDIVRLGSSTED*K 364 + L N K+ +G IL+EDIV+LGS TED K Sbjct: 713 QELISNLSKDRDGKILVEDIVKLGSWTEDAK 743 >ref|XP_002315110.1| predicted protein [Populus trichocarpa] gi|222864150|gb|EEF01281.1| predicted protein [Populus trichocarpa] Length = 658 Score = 47.4 bits (111), Expect(2) = 9e-09 Identities = 23/29 (79%), Positives = 25/29 (86%) Frame = -2 Query: 517 PEEVAAAAMYLKDTLRKEGVQEFISKLSK 431 PEEVA+AAMYLKD L KEG+QE IS LSK Sbjct: 604 PEEVASAAMYLKDHLGKEGIQELISNLSK 632 Score = 37.0 bits (84), Expect(2) = 9e-09 Identities = 18/29 (62%), Positives = 21/29 (72%) Frame = -3 Query: 456 KNLSVNSPKNTEGTILIEDIVRLGSSTED 370 + L N K+TEG IL+EDIVRLGS ED Sbjct: 624 QELISNLSKDTEGKILVEDIVRLGSEMED 652 >ref|NP_001182835.1| hypothetical protein [Zea mays] gi|238007524|gb|ACR34797.1| unknown [Zea mays] gi|413949092|gb|AFW81741.1| hypothetical protein ZEAMMB73_290034 [Zea mays] Length = 766 Score = 47.4 bits (111), Expect(2) = 2e-08 Identities = 23/29 (79%), Positives = 25/29 (86%) Frame = -2 Query: 517 PEEVAAAAMYLKDTLRKEGVQEFISKLSK 431 PEEVAAAA YLKDT+ KEGVQE I+ LSK Sbjct: 708 PEEVAAAAAYLKDTIGKEGVQELITNLSK 736 Score = 36.2 bits (82), Expect(2) = 2e-08 Identities = 17/29 (58%), Positives = 21/29 (72%) Frame = -3 Query: 456 KNLSVNSPKNTEGTILIEDIVRLGSSTED 370 + L N K+TEG IL+EDIVRL S TE+ Sbjct: 728 QELITNLSKDTEGKILVEDIVRLASQTEE 756 >gb|AFW81740.1| hypothetical protein ZEAMMB73_290034 [Zea mays] Length = 765 Score = 47.4 bits (111), Expect(2) = 2e-08 Identities = 23/29 (79%), Positives = 25/29 (86%) Frame = -2 Query: 517 PEEVAAAAMYLKDTLRKEGVQEFISKLSK 431 PEEVAAAA YLKDT+ KEGVQE I+ LSK Sbjct: 707 PEEVAAAAAYLKDTIGKEGVQELITNLSK 735 Score = 36.2 bits (82), Expect(2) = 2e-08 Identities = 17/29 (58%), Positives = 21/29 (72%) Frame = -3 Query: 456 KNLSVNSPKNTEGTILIEDIVRLGSSTED 370 + L N K+TEG IL+EDIVRL S TE+ Sbjct: 727 QELITNLSKDTEGKILVEDIVRLASQTEE 755 >gb|AFW81739.1| hypothetical protein ZEAMMB73_290034 [Zea mays] Length = 245 Score = 47.4 bits (111), Expect(2) = 2e-08 Identities = 23/29 (79%), Positives = 25/29 (86%) Frame = -2 Query: 517 PEEVAAAAMYLKDTLRKEGVQEFISKLSK 431 PEEVAAAA YLKDT+ KEGVQE I+ LSK Sbjct: 187 PEEVAAAAAYLKDTIGKEGVQELITNLSK 215 Score = 36.2 bits (82), Expect(2) = 2e-08 Identities = 17/29 (58%), Positives = 21/29 (72%) Frame = -3 Query: 456 KNLSVNSPKNTEGTILIEDIVRLGSSTED 370 + L N K+TEG IL+EDIVRL S TE+ Sbjct: 207 QELITNLSKDTEGKILVEDIVRLASQTEE 235