BLASTX nr result

ID: Coptis24_contig00029142 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029142
         (469 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAX33316.1| secondary cell wall-related glycosyltransferase f...   205   3e-51
ref|XP_002278157.2| PREDICTED: uncharacterized protein LOC100245...   201   7e-50
emb|CBI19971.3| unnamed protein product [Vitis vinifera]              201   7e-50
ref|XP_002307480.1| predicted protein [Populus trichocarpa] gi|2...   196   2e-48
gb|AAX33317.1| secondary cell wall-related glycosyltransferase f...   186   2e-45

>gb|AAX33316.1| secondary cell wall-related glycosyltransferase family 8 [Populus
           tremula x Populus tremuloides]
          Length = 649

 Score =  205 bits (522), Expect = 3e-51
 Identities = 93/154 (60%), Positives = 119/154 (77%)
 Frame = +2

Query: 2   SRPSFVGRWMRERPILDPRYVSHLDINWDQILRTIGKMTETHSCRGIGLLNFNESETNLW 181
           SRPSFV RW R+   +DPRY+S+LDINWDQI   I K+ +++  +GIGLLNFNESE N W
Sbjct: 93  SRPSFVDRWTRDGAAVDPRYISNLDINWDQISDNIVKLDDSNEYQGIGLLNFNESEINNW 152

Query: 182 KRRMPDAIHVSVHLDYVRDNVTWESLYPEWIDEEQESEVPFCPSLPEPSIPGNPKLHLIA 361
           K  + D  HV +HL++V ++VTWESLYPEWIDEE+E EVP CP LP+  +PG P++ +IA
Sbjct: 153 KLMLLDVEHVVLHLEHVAEDVTWESLYPEWIDEEEEFEVPTCPVLPKLKVPGKPRIDIIA 212

Query: 362 VKLPCQRLANWSRDISRLHLQLAAARISASRKRY 463
           VKLPC +   WSRD++RLHLQLAAA ++AS K Y
Sbjct: 213 VKLPCNKSGKWSRDVARLHLQLAAANLAASAKSY 246


>ref|XP_002278157.2| PREDICTED: uncharacterized protein LOC100245489 [Vitis vinifera]
          Length = 637

 Score =  201 bits (510), Expect = 7e-50
 Identities = 90/154 (58%), Positives = 119/154 (77%)
 Frame = +2

Query: 2   SRPSFVGRWMRERPILDPRYVSHLDINWDQILRTIGKMTETHSCRGIGLLNFNESETNLW 181
           SR SFV RW+R+    DPRY S L INWDQI + I K+ + +  +G+GLLNFN+ E + W
Sbjct: 88  SRKSFVDRWIRDAD--DPRYTSSLQINWDQISKVIEKLDDRNEYQGVGLLNFNDKENDDW 145

Query: 182 KRRMPDAIHVSVHLDYVRDNVTWESLYPEWIDEEQESEVPFCPSLPEPSIPGNPKLHLIA 361
           K+ +PDA H+ +HLD+V +N+TWESLYPEWIDEE+E EVP CPSLP   +PG P++ LIA
Sbjct: 146 KQLLPDAEHIVLHLDHVLNNITWESLYPEWIDEEEEFEVPSCPSLPRLPVPGKPRIDLIA 205

Query: 362 VKLPCQRLANWSRDISRLHLQLAAARISASRKRY 463
           VKLPC +  +W+RD++RLHLQLAAAR++A+ K Y
Sbjct: 206 VKLPCNKSGDWARDVARLHLQLAAARLAATAKSY 239


>emb|CBI19971.3| unnamed protein product [Vitis vinifera]
          Length = 558

 Score =  201 bits (510), Expect = 7e-50
 Identities = 90/154 (58%), Positives = 119/154 (77%)
 Frame = +2

Query: 2   SRPSFVGRWMRERPILDPRYVSHLDINWDQILRTIGKMTETHSCRGIGLLNFNESETNLW 181
           SR SFV RW+R+    DPRY S L INWDQI + I K+ + +  +G+GLLNFN+ E + W
Sbjct: 88  SRKSFVDRWIRDAD--DPRYTSSLQINWDQISKVIEKLDDRNEYQGVGLLNFNDKENDDW 145

Query: 182 KRRMPDAIHVSVHLDYVRDNVTWESLYPEWIDEEQESEVPFCPSLPEPSIPGNPKLHLIA 361
           K+ +PDA H+ +HLD+V +N+TWESLYPEWIDEE+E EVP CPSLP   +PG P++ LIA
Sbjct: 146 KQLLPDAEHIVLHLDHVLNNITWESLYPEWIDEEEEFEVPSCPSLPRLPVPGKPRIDLIA 205

Query: 362 VKLPCQRLANWSRDISRLHLQLAAARISASRKRY 463
           VKLPC +  +W+RD++RLHLQLAAAR++A+ K Y
Sbjct: 206 VKLPCNKSGDWARDVARLHLQLAAARLAATAKSY 239


>ref|XP_002307480.1| predicted protein [Populus trichocarpa] gi|222856929|gb|EEE94476.1|
           predicted protein [Populus trichocarpa]
          Length = 629

 Score =  196 bits (498), Expect = 2e-48
 Identities = 88/150 (58%), Positives = 114/150 (76%)
 Frame = +2

Query: 14  FVGRWMRERPILDPRYVSHLDINWDQILRTIGKMTETHSCRGIGLLNFNESETNLWKRRM 193
           FV RW R+   +DPRY+S LD+NWDQI   I K+ +++  +GIGLLNFNESE N WK  +
Sbjct: 77  FVDRWTRDGAAVDPRYISKLDVNWDQISDIIVKLDDSNEYQGIGLLNFNESEINNWKLML 136

Query: 194 PDAIHVSVHLDYVRDNVTWESLYPEWIDEEQESEVPFCPSLPEPSIPGNPKLHLIAVKLP 373
            D  HV +HL++V ++VTWESLYPEWIDEE+E EVP CP LP+  +PG P++ +IAVKLP
Sbjct: 137 LDVEHVVLHLEHVAEDVTWESLYPEWIDEEEEFEVPTCPVLPKLKVPGKPRIDIIAVKLP 196

Query: 374 CQRLANWSRDISRLHLQLAAARISASRKRY 463
           C +   WSRD++RLHLQLAAA ++AS K Y
Sbjct: 197 CNKSGKWSRDVARLHLQLAAANLAASAKSY 226


>gb|AAX33317.1| secondary cell wall-related glycosyltransferase family 8 [Populus
           tremula x Populus tremuloides]
          Length = 636

 Score =  186 bits (472), Expect = 2e-45
 Identities = 89/154 (57%), Positives = 112/154 (72%)
 Frame = +2

Query: 2   SRPSFVGRWMRERPILDPRYVSHLDINWDQILRTIGKMTETHSCRGIGLLNFNESETNLW 181
           SR +FV RW+      DPRYVS LD+ WD +++ I K+ E +  +GIGLLNFN+SE   W
Sbjct: 83  SRQNFVNRWIWGGS--DPRYVSDLDVKWDDVMKVIEKLGEQNDYQGIGLLNFNDSEVYNW 140

Query: 182 KRRMPDAIHVSVHLDYVRDNVTWESLYPEWIDEEQESEVPFCPSLPEPSIPGNPKLHLIA 361
            +  PDA HV++ LDY   N+TW+SLYPEWIDEEQE EVP CPSLP+P  P   +L LIA
Sbjct: 141 NQLTPDATHVNIQLDYADKNMTWDSLYPEWIDEEQEKEVPVCPSLPKPDTP-RKRLDLIA 199

Query: 362 VKLPCQRLANWSRDISRLHLQLAAARISASRKRY 463
           VKLPC+   NWSRD++RLHLQLAAA ++AS K +
Sbjct: 200 VKLPCRNEWNWSRDVARLHLQLAAASLAASAKGF 233


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