BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029106
         (504 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN79939.1| hypothetical protein VITISV_027778 [Vitis vinifera]    99   5e-19
ref|XP_002272207.2| PREDICTED: 5'-3' exoribonuclease 3-like [Vit...    98   6e-19
ref|XP_002328516.1| predicted protein [Populus trichocarpa] gi|2...    92   4e-17
gb|EAZ28895.1| hypothetical protein OsJ_12935 [Oryza sativa Japo...    92   4e-17
ref|NP_001051542.1| Os03g0794800 [Oryza sativa Japonica Group] g...    92   4e-17

>emb|CAN79939.1| hypothetical protein VITISV_027778 [Vitis vinifera]
          Length = 918

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 64/151 (42%), Positives = 84/151 (55%), Gaps = 7/151 (4%)
 Frame = +1

Query: 4    KLPFIEEKRLLAETSKLENELEEYEINRNSESREKIFVSSS---HDFASQIVSLYEQNAT 174
            KLPFI+E RLLAET KLE ELEE E  RN+ S + +F+  S     F  + VS  + N T
Sbjct: 578  KLPFIDEARLLAETRKLEKELEEQEAVRNARSFDHLFLRFSDKLRSFYXEQVSCRKPNKT 637

Query: 175  KK--EIFASGDMNGFIAPSSEYSGYDTSSV--KQAESATKNDVLCATYEFPISNTHIPRL 342
             K    F+ G +NG+I   +       S+   K  E+  ++DV+   YE P    HIPR 
Sbjct: 638  AKIDSNFSLG-INGYICFDNNGLNMMNSTCLDKNLENIQEDDVISMLYEVPNGCLHIPRP 696

Query: 343  LENVTIPEKTLTETDNVKRPLWHEYEGHRPP 435
            LE    P KT+TE D  +  LWHEY+G +PP
Sbjct: 697  LEGTIFPFKTITEADIEETLLWHEYKGSKPP 727


>ref|XP_002272207.2| PREDICTED: 5'-3' exoribonuclease 3-like [Vitis vinifera]
          Length = 1072

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 63/151 (41%), Positives = 86/151 (56%), Gaps = 7/151 (4%)
 Frame = +1

Query: 4    KLPFIEEKRLLAETSKLENELEEYEINRNSESREKIFVSSSHD---FASQIVSLYEQNAT 174
            KLPFI+E RLLAET KLE ELE+ E  RN+ S +++F+  S     F ++ VS  + N T
Sbjct: 732  KLPFIDEARLLAETRKLEKELEDQEAVRNARSFDQLFLRFSDKLRLFYTEQVSCRKPNKT 791

Query: 175  KK--EIFASGDMNGFIAPSSEYSGYDTSSV--KQAESATKNDVLCATYEFPISNTHIPRL 342
             K    F+ G +NG+I   +       S+   K  E+  ++DV+   YE P    HIPR 
Sbjct: 792  AKIDSNFSLG-INGYICFDNNGLNMMNSTCLDKNLENIQEDDVISMLYEVPNGCLHIPRP 850

Query: 343  LENVTIPEKTLTETDNVKRPLWHEYEGHRPP 435
            LE    P KT+TE D  +  LWHEY+G +PP
Sbjct: 851  LEGTIFPFKTITEADIEETLLWHEYKGSKPP 881


>ref|XP_002328516.1| predicted protein [Populus trichocarpa] gi|222838231|gb|EEE76596.1|
            predicted protein [Populus trichocarpa]
          Length = 948

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 60/154 (38%), Positives = 80/154 (51%), Gaps = 12/154 (7%)
 Frame = +1

Query: 4    KLPFIEEKRLLAETSKLENELEEYEINRNSESREKIFVSSSHDFASQIVSLYEQN----- 168
            KLPFI+E++LLA+T KLE  L E E  RNS  R+ ++V   H  + Q++S Y  N     
Sbjct: 582  KLPFIDERKLLAQTKKLERTLMEEEQVRNSVMRDLLYVHPVHPLSQQVISYYHHNYRLPV 641

Query: 169  ----ATKKEIFASGDMNGF--IAPSSEYSGYDTSSVKQAESATKNDVLCATYEFPISNTH 330
                A K +  ASG MNG+  ++  + +     S +    +   N VL  TY  P S+ H
Sbjct: 642  SERIALKIDTRASGGMNGYLWLSERNVWRSVVPSPINGLPTLEYNQVLNITYLTPSSHRH 701

Query: 331  IPRLLENVTIPEKTLTETDNVKRP-LWHEYEGHR 429
            IP   E V +PEK L  TD    P LWHE  G R
Sbjct: 702  IPEPPEGVVMPEKILKPTDIKLFPTLWHEDNGRR 735


>gb|EAZ28895.1| hypothetical protein OsJ_12935 [Oryza sativa Japonica Group]
          Length = 997

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 66/155 (42%), Positives = 80/155 (51%), Gaps = 11/155 (7%)
 Frame = +1

Query: 4    KLPFIEEKRLLAETSKLENELEEYEINRNSESREKIFVSSSHDFASQIVSLYE---QNAT 174
            KLPFI+E+RLLAET KLE  L + E  RN    + ++V  +H  A+QI  LY+   Q+  
Sbjct: 585  KLPFIDERRLLAETQKLEETLTDEERFRNRTMFDILYVRETHPLAAQIAFLYQMCSQSPN 644

Query: 175  KKEIF-----ASGDMNGFIAPSSE--YSGYDTSSVKQAESATKNDVLCATYEFPISNTHI 333
               I      ASG MNGF+  S    YS   TS VK      +N VL ATY  P  + HI
Sbjct: 645  ASYIIPIDPAASGGMNGFLCLSERNCYSIVVTSPVKGFNGIAQNRVLNATYLNPQYHKHI 704

Query: 334  PRLLENVTIPEKTLTETDNVKRP-LWHEYEGHRPP 435
            P   E V IP K L  +D    P LWHE    R P
Sbjct: 705  PEPPEGVIIPAKILKPSDFKPFPILWHEDNSRRQP 739


>ref|NP_001051542.1| Os03g0794800 [Oryza sativa Japonica Group] gi|50400038|gb|AAT76426.1|
            putative 5'-3' exonuclease [Oryza sativa Japonica Group]
            gi|108711531|gb|ABF99326.1| 5'-3' exoribonuclease,
            putative, expressed [Oryza sativa Japonica Group]
            gi|113550013|dbj|BAF13456.1| Os03g0794800 [Oryza sativa
            Japonica Group]
          Length = 988

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 66/155 (42%), Positives = 80/155 (51%), Gaps = 11/155 (7%)
 Frame = +1

Query: 4    KLPFIEEKRLLAETSKLENELEEYEINRNSESREKIFVSSSHDFASQIVSLYE---QNAT 174
            KLPFI+E+RLLAET KLE  L + E  RN    + ++V  +H  A+QI  LY+   Q+  
Sbjct: 576  KLPFIDERRLLAETQKLEETLTDEERFRNRTMFDILYVRETHPLAAQIAFLYQMCSQSPN 635

Query: 175  KKEIF-----ASGDMNGFIAPSSE--YSGYDTSSVKQAESATKNDVLCATYEFPISNTHI 333
               I      ASG MNGF+  S    YS   TS VK      +N VL ATY  P  + HI
Sbjct: 636  ASYIIPIDPAASGGMNGFLCLSERNCYSIVVTSPVKGFNGIAQNRVLNATYLNPQYHKHI 695

Query: 334  PRLLENVTIPEKTLTETDNVKRP-LWHEYEGHRPP 435
            P   E V IP K L  +D    P LWHE    R P
Sbjct: 696  PEPPEGVIIPAKILKPSDFKPFPILWHEDNSRRQP 730