BLASTX nr result

ID: Coptis24_contig00029104 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029104
         (483 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271044.2| PREDICTED: uncharacterized protein LOC100247...   172   2e-41
ref|XP_002524784.1| hydrolase, putative [Ricinus communis] gi|22...   154   5e-36
ref|XP_002277228.1| PREDICTED: uncharacterized protein LOC100259...   154   7e-36
ref|XP_002312721.1| predicted protein [Populus trichocarpa] gi|2...   141   5e-32
ref|XP_002321050.1| predicted protein [Populus trichocarpa] gi|2...   134   6e-30

>ref|XP_002271044.2| PREDICTED: uncharacterized protein LOC100247717 [Vitis vinifera]
          Length = 511

 Score =  172 bits (437), Expect = 2e-41
 Identities = 94/163 (57%), Positives = 117/163 (71%), Gaps = 4/163 (2%)
 Frame = -2

Query: 479 FPAMLSLLGRQLRRFCSRIRWSLK-RSKPRVVIKRFGKSNSKTQ---PREELDNQGSVVH 312
           F AML ++  +LRR CSR+RW L+ RS+PRVVIK  GKS+SK+     RE   N  +VVH
Sbjct: 15  FSAMLKIINTRLRRLCSRLRWPLRGRSRPRVVIKTLGKSSSKSHFDAKREAAANGSAVVH 74

Query: 311 LNGQLGVSKIERPIRVATFNAAMFSMAPAVPIADKSVISDDEEEEYFKIRRNMELDIRAK 132
            NGQLG  K  + IR+ATFNAA+FSMAPAVP A+K     +   E  K +R+++++ R K
Sbjct: 75  PNGQLGAEKPNKTIRIATFNAALFSMAPAVPRAEKGENFGNGNVEGLKEKRSVDMNFRTK 134

Query: 131 SVNDRPKSILKQSPLHPISMVSTEHLSTQQKFVKSKLRVSINL 3
           S N+RPKSILKQSPLHP SM+  E+LS QQKF KSK RVSINL
Sbjct: 135 SANERPKSILKQSPLHPNSMILPENLSKQQKFAKSKPRVSINL 177


>ref|XP_002524784.1| hydrolase, putative [Ricinus communis] gi|223535968|gb|EEF37627.1|
           hydrolase, putative [Ricinus communis]
          Length = 523

 Score =  154 bits (390), Expect = 5e-36
 Identities = 86/164 (52%), Positives = 111/164 (67%), Gaps = 5/164 (3%)
 Frame = -2

Query: 479 FPAMLSLLGRQLRRFCSRIRWSL-KRSKPRVVIKRFGKSNSK--TQPREELDNQGSV-VH 312
           F  ML +L R+LRR CSR+RW + +RS+P+++I++ GKSNS      R E    GS  VH
Sbjct: 20  FSTMLKILNRRLRRLCSRLRWPIHRRSRPKILIRKLGKSNSNHHNDSRNESSMNGSATVH 79

Query: 311 LNGQLGVSKIE-RPIRVATFNAAMFSMAPAVPIADKSVISDDEEEEYFKIRRNMELDIRA 135
            NG     K E +PI++ATFNAA+FSMAP VP    S   D + E++ K + ++  ++R 
Sbjct: 80  PNGLFDCLKTEEKPIKIATFNAALFSMAPVVPKVFNSSSIDYDIEDFEKGKTSLNFNLRT 139

Query: 134 KSVNDRPKSILKQSPLHPISMVSTEHLSTQQKFVKSKLRVSINL 3
           +S NDRPKSILKQSPLHP S    E+LS QQKF KSKLRVSINL
Sbjct: 140 RSANDRPKSILKQSPLHPSSTNGNENLSEQQKFAKSKLRVSINL 183


>ref|XP_002277228.1| PREDICTED: uncharacterized protein LOC100259606 [Vitis vinifera]
          Length = 486

 Score =  154 bits (389), Expect = 7e-36
 Identities = 86/157 (54%), Positives = 115/157 (73%), Gaps = 1/157 (0%)
 Frame = -2

Query: 470 MLSLLGRQLRRFCSRIRWSL-KRSKPRVVIKRFGKSNSKTQPREELDNQGSVVHLNGQLG 294
           MLS+L R+L+R C+R+RW + +R KP+VVI+RFGK   K QP+    +  S +HLN QLG
Sbjct: 1   MLSILHRKLQRICARLRWLMWRRPKPKVVIRRFGKL-MKRQPKGVPGSSKSAIHLNSQLG 59

Query: 293 VSKIERPIRVATFNAAMFSMAPAVPIADKSVISDDEEEEYFKIRRNMELDIRAKSVNDRP 114
            S   +PIR+ATFNAAMF +APAVP  +KSV+   EEE+Y + + +M++D  AKS N RP
Sbjct: 60  RSISGKPIRIATFNAAMFCLAPAVPKPEKSVVFCQEEEDYLRFKSHMKIDTWAKSENYRP 119

Query: 113 KSILKQSPLHPISMVSTEHLSTQQKFVKSKLRVSINL 3
           KSILKQSPLH  +  + +HLS QQK  +S+L+VSINL
Sbjct: 120 KSILKQSPLHS-TPNTPDHLS-QQKLTRSRLKVSINL 154


>ref|XP_002312721.1| predicted protein [Populus trichocarpa] gi|222852541|gb|EEE90088.1|
           predicted protein [Populus trichocarpa]
          Length = 493

 Score =  141 bits (356), Expect = 5e-32
 Identities = 76/157 (48%), Positives = 109/157 (69%), Gaps = 1/157 (0%)
 Frame = -2

Query: 470 MLSLLGRQLRRFCSRIRWSL-KRSKPRVVIKRFGKSNSKTQPREELDNQGSVVHLNGQLG 294
           ML L+GR+LR+ C+RIR  + +R +P+V+IKRFGK +SK + +     + S +HLNG+ G
Sbjct: 1   MLGLIGRKLRQLCARIRLLIWRRPRPKVIIKRFGKISSKDRCKWRPGFRKSSIHLNGKHG 60

Query: 293 VSKIERPIRVATFNAAMFSMAPAVPIADKSVISDDEEEEYFKIRRNMELDIRAKSVNDRP 114
            S  +RPIR+ATFN AMFS+APAVP A++S++   E + Y   +  +E D    SV+  P
Sbjct: 61  NSSSDRPIRIATFNVAMFSLAPAVPKAEESIMISQEHDGYMAYKSPVEFDAHVNSVSYYP 120

Query: 113 KSILKQSPLHPISMVSTEHLSTQQKFVKSKLRVSINL 3
           KSILKQSPLH  S+ ++E    ++K  +SKL+VSINL
Sbjct: 121 KSILKQSPLHD-SLKNSEQFPAEKKVSRSKLKVSINL 156


>ref|XP_002321050.1| predicted protein [Populus trichocarpa] gi|222861823|gb|EEE99365.1|
           predicted protein [Populus trichocarpa]
          Length = 449

 Score =  134 bits (338), Expect = 6e-30
 Identities = 84/160 (52%), Positives = 103/160 (64%), Gaps = 4/160 (2%)
 Frame = -2

Query: 470 MLSLLGRQLRRFCSRIRWSL-KRSKPRVVIKRFGKSNSKTQPREELD---NQGSVVHLNG 303
           ML LL ++LRR  SR R  +   S+ +VVIK+FGKSN K+Q   +++   N  + VH NG
Sbjct: 1   MLKLLNKRLRRLYSRFRRRIGSGSRRKVVIKKFGKSNFKSQNDIKVEPTINGSAAVHPNG 60

Query: 302 QLGVSKIERPIRVATFNAAMFSMAPAVPIADKSVISDDEEEEYFKIRRNMELDIRAKSVN 123
           QLG    E+PI++ATFNAA+FSMAPAVP  +                      +RAKS N
Sbjct: 61  QLGE---EKPIKLATFNAALFSMAPAVPKTENPS------------------SLRAKSAN 99

Query: 122 DRPKSILKQSPLHPISMVSTEHLSTQQKFVKSKLRVSINL 3
           DRPKSILKQSPLHP S+   E+LS QQKF KSKLRVSINL
Sbjct: 100 DRPKSILKQSPLHPNSIDGNENLSKQQKFAKSKLRVSINL 139


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