BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029102
         (850 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264641.1| PREDICTED: RNA pseudourine synthase 6, chlor...   419   e-115
ref|XP_003541622.1| PREDICTED: RNA pseudourine synthase 6, chlor...   413   e-113
ref|XP_002518515.1| ribosomal pseudouridine synthase, putative [...   409   e-112
ref|XP_002304926.1| predicted protein [Populus trichocarpa] gi|2...   409   e-112
ref|XP_003547248.1| PREDICTED: RNA pseudourine synthase 6, chlor...   406   e-111

>ref|XP_002264641.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic [Vitis
           vinifera] gi|302144082|emb|CBI23187.3| unnamed protein
           product [Vitis vinifera]
          Length = 472

 Score =  419 bits (1077), Expect = e-115
 Identities = 192/242 (79%), Positives = 216/242 (89%)
 Frame = +2

Query: 2   TSVGGTTDNIEESCATFATRALGLAIPLKTTHQIDNCTAGCVVLARTKEYCSVFHGKIRE 181
           TSVGGTTDNIEESCATFATRALGL  PL+TTHQIDNCT GCVVLARTKEYCSVFHGKIRE
Sbjct: 230 TSVGGTTDNIEESCATFATRALGLTTPLRTTHQIDNCTEGCVVLARTKEYCSVFHGKIRE 289

Query: 182 KRVKKLYRALAAAPVPLGTITHYMRPVNIAPRLVSKDFHRGWNLCQLDVLECKEVPWPNV 361
           K+VKKLYRALAAAP+P+G +THYMRPVNIAPRL+S+DF +GW LCQL+VLECKEVPWP+ 
Sbjct: 290 KKVKKLYRALAAAPMPIGIVTHYMRPVNIAPRLISEDFIKGWYLCQLEVLECKEVPWPST 349

Query: 362 FIQEKYCVDDCGWPSKDVAYECKINLLTGRTHQIRAQFAAYGAPIVGDSMYMPAVIAERS 541
            I+EKYC++D GWP K+ A++CKINLLTGRTHQIRAQ AA GAPIVGDSMYMPA IAE +
Sbjct: 350 LIEEKYCIEDRGWPLKNSAFKCKINLLTGRTHQIRAQLAACGAPIVGDSMYMPAAIAEIT 409

Query: 542 SPGLNPFGEHGKLYPTEEDKANAVEEWMARHGKEPSVAIGLQAFQISWDEGEHFYECGPP 721
           SPGLNPFG++ K Y TE D+  AV EW+A+HGKEP VAIGLQA QISWD+GEHFY+ G P
Sbjct: 410 SPGLNPFGKYKKKYTTENDRETAVAEWIAQHGKEPGVAIGLQACQISWDDGEHFYKAGSP 469

Query: 722 WW 727
           WW
Sbjct: 470 WW 471


>ref|XP_003541622.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic-like [Glycine
           max]
          Length = 473

 Score =  413 bits (1062), Expect = e-113
 Identities = 185/243 (76%), Positives = 216/243 (88%)
 Frame = +2

Query: 2   TSVGGTTDNIEESCATFATRALGLAIPLKTTHQIDNCTAGCVVLARTKEYCSVFHGKIRE 181
           TSVGGTTDNIEESCATFATRALG+  PL TTHQIDNCT GCVVLARTK+YCS+FHGKIRE
Sbjct: 230 TSVGGTTDNIEESCATFATRALGMTTPLMTTHQIDNCTEGCVVLARTKDYCSIFHGKIRE 289

Query: 182 KRVKKLYRALAAAPVPLGTITHYMRPVNIAPRLVSKDFHRGWNLCQLDVLECKEVPWPNV 361
           K+VKKLY ALAA+P+P G ITHYMRP+N+APRL+S+DF +GW+LCQL+VLEC+++PWP  
Sbjct: 290 KKVKKLYLALAASPLPTGIITHYMRPINMAPRLISEDFIKGWHLCQLEVLECRKIPWPTT 349

Query: 362 FIQEKYCVDDCGWPSKDVAYECKINLLTGRTHQIRAQFAAYGAPIVGDSMYMPAVIAERS 541
            IQ+KYCV+DCGWPS+D AYECKINLLTG+THQIRAQFAAY AP++GDSMYMPA IA+ S
Sbjct: 350 AIQDKYCVEDCGWPSQDYAYECKINLLTGKTHQIRAQFAAYKAPLIGDSMYMPAAIADVS 409

Query: 542 SPGLNPFGEHGKLYPTEEDKANAVEEWMARHGKEPSVAIGLQAFQISWDEGEHFYECGPP 721
           +PGLNPFG++ K + +E +K  AV  WMA+HGKEPSVAIGLQA QISWD+ EHFYE G P
Sbjct: 410 NPGLNPFGKYKKDFSSESEKETAVVNWMAQHGKEPSVAIGLQACQISWDDDEHFYEAGLP 469

Query: 722 WWR 730
           WWR
Sbjct: 470 WWR 472


>ref|XP_002518515.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
           gi|223542360|gb|EEF43902.1| ribosomal pseudouridine
           synthase, putative [Ricinus communis]
          Length = 476

 Score =  409 bits (1052), Expect = e-112
 Identities = 187/243 (76%), Positives = 214/243 (88%)
 Frame = +2

Query: 2   TSVGGTTDNIEESCATFATRALGLAIPLKTTHQIDNCTAGCVVLARTKEYCSVFHGKIRE 181
           TSVGGT DNIEESCATFATRALGL  PLKTTHQIDNCT GCVVLAR+KEYCSVFHGKIRE
Sbjct: 230 TSVGGTADNIEESCATFATRALGLTTPLKTTHQIDNCTEGCVVLARSKEYCSVFHGKIRE 289

Query: 182 KRVKKLYRALAAAPVPLGTITHYMRPVNIAPRLVSKDFHRGWNLCQLDVLECKEVPWPNV 361
           K+VKKLY ALAA+PVP+G I +YMRPVNIAPRL+S++F  GW+LCQL+VLEC++VPWP+ 
Sbjct: 290 KKVKKLYLALAASPVPVGVIKNYMRPVNIAPRLLSEEFVNGWHLCQLEVLECRKVPWPDA 349

Query: 362 FIQEKYCVDDCGWPSKDVAYECKINLLTGRTHQIRAQFAAYGAPIVGDSMYMPAVIAERS 541
            I+EKY V+DCGWPSKD AYECKINLLTGRTHQIRAQ AA GAP+VGDSMYMPA +AE +
Sbjct: 350 AIEEKYSVEDCGWPSKDFAYECKINLLTGRTHQIRAQLAASGAPLVGDSMYMPAAVAEMA 409

Query: 542 SPGLNPFGEHGKLYPTEEDKANAVEEWMARHGKEPSVAIGLQAFQISWDEGEHFYECGPP 721
           +PGLNPFG+H K Y  E D++ AV EW+A+HGKEP VAIGLQA +ISWDEG+H Y+ G P
Sbjct: 410 NPGLNPFGKHRKQYTNESDESMAVAEWVAQHGKEPKVAIGLQACEISWDEGKHIYKAGSP 469

Query: 722 WWR 730
           WWR
Sbjct: 470 WWR 472


>ref|XP_002304926.1| predicted protein [Populus trichocarpa] gi|222847890|gb|EEE85437.1|
           predicted protein [Populus trichocarpa]
          Length = 470

 Score =  409 bits (1050), Expect = e-112
 Identities = 186/243 (76%), Positives = 212/243 (87%)
 Frame = +2

Query: 2   TSVGGTTDNIEESCATFATRALGLAIPLKTTHQIDNCTAGCVVLARTKEYCSVFHGKIRE 181
           TSVGGTTDNIEESCATFATRALGL  PL+TTHQIDNCT GCVVLART+E CSVFHGKIRE
Sbjct: 224 TSVGGTTDNIEESCATFATRALGLTAPLRTTHQIDNCTEGCVVLARTREDCSVFHGKIRE 283

Query: 182 KRVKKLYRALAAAPVPLGTITHYMRPVNIAPRLVSKDFHRGWNLCQLDVLECKEVPWPNV 361
           K VKKLY ALAA+PVP+G + HYMRP+N+APRLVS++F +GW+LCQL+V+ECK VPWP+ 
Sbjct: 284 KTVKKLYIALAASPVPIGVVNHYMRPINMAPRLVSEEFIKGWHLCQLEVMECKRVPWPDA 343

Query: 362 FIQEKYCVDDCGWPSKDVAYECKINLLTGRTHQIRAQFAAYGAPIVGDSMYMPAVIAERS 541
            ++EKYCV DCGWPSKD AYECKINLLTGRTHQIRAQ AA GAP+VGDSMYMPA +AE  
Sbjct: 344 VMEEKYCVQDCGWPSKDHAYECKINLLTGRTHQIRAQLAALGAPLVGDSMYMPAAVAEMV 403

Query: 542 SPGLNPFGEHGKLYPTEEDKANAVEEWMARHGKEPSVAIGLQAFQISWDEGEHFYECGPP 721
           SPG NPFG++ K Y +E+DKA AVEEW+  HGKEP+VAIGLQA QISWD+G+H Y  G P
Sbjct: 404 SPGCNPFGKYKKQYTSEDDKAIAVEEWVLCHGKEPNVAIGLQACQISWDDGKHIYNAGSP 463

Query: 722 WWR 730
           WWR
Sbjct: 464 WWR 466


>ref|XP_003547248.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic-like [Glycine
           max]
          Length = 473

 Score =  406 bits (1044), Expect = e-111
 Identities = 183/243 (75%), Positives = 212/243 (87%)
 Frame = +2

Query: 2   TSVGGTTDNIEESCATFATRALGLAIPLKTTHQIDNCTAGCVVLARTKEYCSVFHGKIRE 181
           TSVGGTTDNIEESCATFATRALG+  PL TTHQIDNCT GCVVLARTKEYCSVFHGKIRE
Sbjct: 230 TSVGGTTDNIEESCATFATRALGMTTPLMTTHQIDNCTEGCVVLARTKEYCSVFHGKIRE 289

Query: 182 KRVKKLYRALAAAPVPLGTITHYMRPVNIAPRLVSKDFHRGWNLCQLDVLECKEVPWPNV 361
           K+VKK Y ALAA P+P G ITHYMRP+++APRL+S+DF +GW+LCQL+VLEC++VPWP  
Sbjct: 290 KKVKKFYLALAAFPLPTGIITHYMRPIDMAPRLISEDFIKGWHLCQLEVLECRKVPWPAT 349

Query: 362 FIQEKYCVDDCGWPSKDVAYECKINLLTGRTHQIRAQFAAYGAPIVGDSMYMPAVIAERS 541
            IQ+KYC++DCGWPS+D AYECKINLLTG+THQIRAQFAAY AP++GDSMYMPA IA  S
Sbjct: 350 AIQDKYCIEDCGWPSQDYAYECKINLLTGKTHQIRAQFAAYKAPLIGDSMYMPAAIANMS 409

Query: 542 SPGLNPFGEHGKLYPTEEDKANAVEEWMARHGKEPSVAIGLQAFQISWDEGEHFYECGPP 721
           +PGLNPFG++ K + +E +K  AV  W+A+HGKEPSVAIGLQA QISWD+ EHFYE   P
Sbjct: 410 NPGLNPFGKYKKDFSSESEKETAVVNWIAQHGKEPSVAIGLQACQISWDDDEHFYEASSP 469

Query: 722 WWR 730
           WWR
Sbjct: 470 WWR 472