BLASTX nr result

ID: Coptis24_contig00029096 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029096
         (303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277898.1| PREDICTED: uncharacterized protein LOC100254...   105   4e-21
emb|CAN75979.1| hypothetical protein VITISV_012183 [Vitis vinifera]   105   4e-21
gb|AFK37987.1| unknown [Lotus japonicus]                              102   3e-20
ref|XP_002517209.1| conserved hypothetical protein [Ricinus comm...    99   3e-19
ref|XP_003536541.1| PREDICTED: uncharacterized protein LOC100783...    98   8e-19

>ref|XP_002277898.1| PREDICTED: uncharacterized protein LOC100254485 [Vitis vinifera]
          Length = 235

 Score =  105 bits (262), Expect = 4e-21
 Identities = 55/88 (62%), Positives = 66/88 (75%), Gaps = 1/88 (1%)
 Frame = +1

Query: 1   IDTTCSPRISFSVDFLDDDNFLSLTPNSETXXXXXXXXXX-RNMDFEFLSGNSATTNTMI 177
           I+ T SPRISFS DFLD+ NF+S++PNSE            RN DFEFLS NS T++TM+
Sbjct: 14  IEPTVSPRISFSSDFLDEKNFISISPNSEKEKQHEMDQEKARNTDFEFLSSNS-TSHTML 72

Query: 178 TADELFFEGRLLPFWQMQQSNKLNKITL 261
           TADELFFEG+LLPFWQ Q S KLNK++L
Sbjct: 73  TADELFFEGKLLPFWQRQHSEKLNKMSL 100


>emb|CAN75979.1| hypothetical protein VITISV_012183 [Vitis vinifera]
          Length = 301

 Score =  105 bits (262), Expect = 4e-21
 Identities = 55/88 (62%), Positives = 66/88 (75%), Gaps = 1/88 (1%)
 Frame = +1

Query: 1   IDTTCSPRISFSVDFLDDDNFLSLTPNSETXXXXXXXXXX-RNMDFEFLSGNSATTNTMI 177
           I+ T SPRISFS DFLD+ NF+S++PNSE            RN DFEFLS NS T++TM+
Sbjct: 14  IEPTVSPRISFSSDFLDEKNFISISPNSEKEKQHEMDQEKARNTDFEFLSSNS-TSHTML 72

Query: 178 TADELFFEGRLLPFWQMQQSNKLNKITL 261
           TADELFFEG+LLPFWQ Q S KLNK++L
Sbjct: 73  TADELFFEGKLLPFWQRQHSEKLNKMSL 100


>gb|AFK37987.1| unknown [Lotus japonicus]
          Length = 156

 Score =  102 bits (254), Expect = 3e-20
 Identities = 50/87 (57%), Positives = 61/87 (70%)
 Frame = +1

Query: 1   IDTTCSPRISFSVDFLDDDNFLSLTPNSETXXXXXXXXXXRNMDFEFLSGNSATTNTMIT 180
           ID   SPRISFS +FLDD+NF+S++PN             RN +FEFLS   +  NT++T
Sbjct: 14  IDAPSSPRISFSAEFLDDENFISISPNP-VYERDHQEKEQRNPEFEFLSSKGSNNNTVVT 72

Query: 181 ADELFFEGRLLPFWQMQQSNKLNKITL 261
           ADELFFEG+LLPFWQMQ   KLNKI+L
Sbjct: 73  ADELFFEGKLLPFWQMQHLEKLNKISL 99


>ref|XP_002517209.1| conserved hypothetical protein [Ricinus communis]
           gi|223543844|gb|EEF45372.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 245

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 54/92 (58%), Positives = 65/92 (70%), Gaps = 5/92 (5%)
 Frame = +1

Query: 1   IDTTCSPRISFSVDFLDDDNFLSLTPNSETXXXXXXXXXX-RNM--DFEFLSGNSATTN- 168
           ID   SPRISFS +FLD++NF+S+ PN+             RN   DFEFLSGNS  ++ 
Sbjct: 14  IDQPSSPRISFSAEFLDENNFISINPNARAERDQEMEREKARNYAADFEFLSGNSTMSSH 73

Query: 169 -TMITADELFFEGRLLPFWQMQQSNKLNKITL 261
            TM+TADELFFEG+LLPFWQMQQS KL+KI L
Sbjct: 74  ATMLTADELFFEGKLLPFWQMQQSEKLHKINL 105


>ref|XP_003536541.1| PREDICTED: uncharacterized protein LOC100783817 [Glycine max]
          Length = 257

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 48/89 (53%), Positives = 62/89 (69%), Gaps = 3/89 (3%)
 Frame = +1

Query: 4   DTTCSPRISFSVDFLDDDNFLSLTPNSETXXXXXXXXXXRNM---DFEFLSGNSATTNTM 174
           D   SPRISFS +FLD++NF+S++PN+E           R     +FEFLS N++  NT+
Sbjct: 15  DAPSSPRISFSAEFLDENNFISISPNAEYEGPDQEKERERARNAAEFEFLSNNTSNNNTV 74

Query: 175 ITADELFFEGRLLPFWQMQQSNKLNKITL 261
           +TADELFFEG+LLPFWQMQ   KL+KI L
Sbjct: 75  VTADELFFEGKLLPFWQMQHLEKLSKINL 103


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