BLASTX nr result

ID: Coptis24_contig00029092 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029092
         (542 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003597218.1| Beta-galactosidase [Medicago truncatula] gi|...   318   3e-85
gb|AFP55546.1| gag-pol polyprotein [Rosa rugosa]                      291   3e-77
emb|CAN60732.1| hypothetical protein VITISV_010209 [Vitis vinifera]   280   1e-73
emb|CAN79977.1| hypothetical protein VITISV_029183 [Vitis vinifera]   276   1e-72
emb|CAN79949.1| hypothetical protein VITISV_044422 [Vitis vinifera]   276   2e-72

>ref|XP_003597218.1| Beta-galactosidase [Medicago truncatula] gi|355486266|gb|AES67469.1|
            Beta-galactosidase [Medicago truncatula]
          Length = 2260

 Score =  318 bits (816), Expect = 3e-85
 Identities = 152/179 (84%), Positives = 163/179 (91%)
 Frame = -3

Query: 537  ALKKNATWELVILPKGKKTVGCRWVFTVKLKADEAIERYKARLVAKGYTQSYGVDYQETF 358
            AL+KNATWELV LP GK TVGCRWVFT+K KAD ++ER+KARLVAKGYTQSYGVDY+ETF
Sbjct: 1453 ALEKNATWELVSLPVGKSTVGCRWVFTIKHKADGSVERFKARLVAKGYTQSYGVDYEETF 1512

Query: 357  ASVAKLNTVRVLLSLTTNKDWPLLQFDVKNAFLHGDLTEEVYMDPPPGIPEYSDTTMVCK 178
            A VAKLNTVRVLLSL  N+DWPLLQFDVKNAFLHGDL EEVYMDPPPGIP YS+ +MVCK
Sbjct: 1513 APVAKLNTVRVLLSLAANQDWPLLQFDVKNAFLHGDLIEEVYMDPPPGIPRYSNISMVCK 1572

Query: 177  LKKVLYGLKQSPRAWFGKFTKSMKKFGYKQSNSDHTLFLKHRRGKITALIIYVDDMVVT 1
            LKK LYGLKQSPRAWFG+FTKSMK FGY QSNSDHTLFLKH  GKITALIIYVDDM+VT
Sbjct: 1573 LKKALYGLKQSPRAWFGRFTKSMKFFGYTQSNSDHTLFLKHNHGKITALIIYVDDMIVT 1631


>gb|AFP55546.1| gag-pol polyprotein [Rosa rugosa]
          Length = 1180

 Score =  291 bits (746), Expect = 3e-77
 Identities = 140/179 (78%), Positives = 154/179 (86%)
 Frame = -3

Query: 537  ALKKNATWELVILPKGKKTVGCRWVFTVKLKADEAIERYKARLVAKGYTQSYGVDYQETF 358
            AL+KN TWELV LP+GKKTVGCRWV+TVK  +D +++RYKARLVAKGYTQ YGVDY ETF
Sbjct: 692  ALEKNCTWELVSLPQGKKTVGCRWVYTVKHNSDGSVDRYKARLVAKGYTQKYGVDYDETF 751

Query: 357  ASVAKLNTVRVLLSLTTNKDWPLLQFDVKNAFLHGDLTEEVYMDPPPGIPEYSDTTMVCK 178
            A VAK+NT+RVLLSL  N DWPL QFDVKNAFLHGDL EEVYMD PPG    +   +VCK
Sbjct: 752  APVAKINTIRVLLSLAANLDWPLQQFDVKNAFLHGDLHEEVYMDLPPGYGTSTGEQVVCK 811

Query: 177  LKKVLYGLKQSPRAWFGKFTKSMKKFGYKQSNSDHTLFLKHRRGKITALIIYVDDMVVT 1
            LKK LYGLKQSPRAWFG+FTK MKK GY+QSNSDHTLFLKHR GK+TALIIYVDDMVVT
Sbjct: 812  LKKSLYGLKQSPRAWFGRFTKFMKKIGYRQSNSDHTLFLKHRCGKVTALIIYVDDMVVT 870


>emb|CAN60732.1| hypothetical protein VITISV_010209 [Vitis vinifera]
          Length = 1409

 Score =  280 bits (715), Expect = 1e-73
 Identities = 133/179 (74%), Positives = 151/179 (84%)
 Frame = -3

Query: 537  ALKKNATWELVILPKGKKTVGCRWVFTVKLKADEAIERYKARLVAKGYTQSYGVDYQETF 358
            AL+KN TW LV LP GKKTVGCRWVF+ K K D ++ERYKARLVAKGYTQ+YGVDYQETF
Sbjct: 921  ALQKNDTWALVPLPXGKKTVGCRWVFSXKHKXDGSVERYKARLVAKGYTQTYGVDYQETF 980

Query: 357  ASVAKLNTVRVLLSLTTNKDWPLLQFDVKNAFLHGDLTEEVYMDPPPGIPEYSDTTMVCK 178
            +  AKLNTVRVL+SL  N DWPL QFDVKNAFLHGDL EEVYMD PPG    +    VCK
Sbjct: 981  SPXAKLNTVRVLISLAANLDWPLHQFDVKNAFLHGDLEEEVYMDIPPGFVSSTQGKEVCK 1040

Query: 177  LKKVLYGLKQSPRAWFGKFTKSMKKFGYKQSNSDHTLFLKHRRGKITALIIYVDDMVVT 1
            L+K LYGLKQSPRAWFG+F+ +M+K G+KQSN DHTLFLKH+RGK+TALIIYVDDM++T
Sbjct: 1041 LQKALYGLKQSPRAWFGRFSLAMRKHGFKQSNXDHTLFLKHQRGKVTALIIYVDDMIIT 1099


>emb|CAN79977.1| hypothetical protein VITISV_029183 [Vitis vinifera]
          Length = 1572

 Score =  276 bits (706), Expect = 1e-72
 Identities = 134/180 (74%), Positives = 150/180 (83%), Gaps = 1/180 (0%)
 Frame = -3

Query: 537  ALKKNATWELVILPKGKKTVGCRWVFTVKLKADEAIERYKARLVAKGYTQSYGVDYQETF 358
            +L+KN TWELV  P GKK VGCRW++TVK KAD +IER+KARLVAKGYTQ+YG+DY ETF
Sbjct: 550  SLQKNETWELVECPPGKKPVGCRWIYTVKYKADGSIERFKARLVAKGYTQTYGIDYTETF 609

Query: 357  ASVAKLNTVRVLLSLTTNKDWPLLQFDVKNAFLHGDLTEEVYMDPPPG-IPEYSDTTMVC 181
            A VAK+NTVRVLLSL  N DWPL QFDVKN FLHG+L+EEVYMD PPG +        VC
Sbjct: 610  AFVAKINTVRVLLSLAANLDWPLQQFDVKNVFLHGELSEEVYMDLPPGCMVSEKQCQKVC 669

Query: 180  KLKKVLYGLKQSPRAWFGKFTKSMKKFGYKQSNSDHTLFLKHRRGKITALIIYVDDMVVT 1
            KLKK LYGLKQSPRAWFG+FTKSM+ FGY+QSNSDHTLFLK   GKIT LI+YVDDMVVT
Sbjct: 670  KLKKSLYGLKQSPRAWFGRFTKSMRAFGYRQSNSDHTLFLKKXXGKITTLIVYVDDMVVT 729


>emb|CAN79949.1| hypothetical protein VITISV_044422 [Vitis vinifera]
          Length = 1176

 Score =  276 bits (705), Expect = 2e-72
 Identities = 133/177 (75%), Positives = 149/177 (84%), Gaps = 1/177 (0%)
 Frame = -3

Query: 528  KNATWELVILPKGKKTVGCRWVFTVKLKADEAIERYKARLVAKGYTQSYGVDYQETFASV 349
            KN TWELV  P GKK VGCRW++TVK KAD +IER+KARLVAKGYTQ+YG+DY ETFA V
Sbjct: 689  KNETWELVECPPGKKPVGCRWIYTVKYKADGSIERFKARLVAKGYTQTYGIDYTETFAPV 748

Query: 348  AKLNTVRVLLSLTTNKDWPLLQFDVKNAFLHGDLTEEVYMDPPPG-IPEYSDTTMVCKLK 172
            AK+NT+RVLLSL  N DWPL QFDVKNAFLHG+L+EEVYMD PPG +        VCKLK
Sbjct: 749  AKINTIRVLLSLAANLDWPLQQFDVKNAFLHGELSEEVYMDLPPGCMVSEXQCQKVCKLK 808

Query: 171  KVLYGLKQSPRAWFGKFTKSMKKFGYKQSNSDHTLFLKHRRGKITALIIYVDDMVVT 1
            K LYGLKQSPRAWFG+FTKSM+ FGY+QSNSDHTLFLK + GKIT LI+YVDDMVVT
Sbjct: 809  KSLYGLKQSPRAWFGRFTKSMRAFGYRQSNSDHTLFLKKQHGKITXLIVYVDDMVVT 865


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