BLASTX nr result

ID: Coptis24_contig00029088 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029088
         (903 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526016.1| conserved hypothetical protein [Ricinus comm...   123   7e-26
emb|CBI26910.3| unnamed protein product [Vitis vinifera]              120   3e-25
ref|XP_002312434.1| predicted protein [Populus trichocarpa] gi|2...   113   5e-23
ref|XP_002314812.1| predicted protein [Populus trichocarpa] gi|2...   108   1e-21
gb|AAD55508.1|AC008148_18 Hypothetical protein [Arabidopsis thal...   100   5e-19

>ref|XP_002526016.1| conserved hypothetical protein [Ricinus communis]
            gi|223534663|gb|EEF36356.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 639

 Score =  123 bits (308), Expect = 7e-26
 Identities = 88/211 (41%), Positives = 115/211 (54%), Gaps = 11/211 (5%)
 Frame = +1

Query: 4    FSLRSDDRAEKRKEFYMKLEEKLHAKEAALNQIQAKTQEEAEAHIKQFRRSLNFKAKPMP 183
            FS +SD+RAE+RKEFYMKLEEKLHAKEA +NQIQAKTQE+ EA IKQ R+SLNFKA PMP
Sbjct: 407  FSFKSDERAERRKEFYMKLEEKLHAKEAEMNQIQAKTQEKTEAEIKQLRKSLNFKAMPMP 466

Query: 184  SFYH-GALSPQILETRKAVDSR---AXXXXXXXXXXXXXXXXXXXFLAQGNHQSLSANKP 351
            SFYH  A+SP  +   KA  S+   A                       G   ++SA +P
Sbjct: 467  SFYHTTAVSPASI-GNKATSSKTKPAKIQQKSTSPGSGAATRSQLLPKAGTGHAVSAGEP 525

Query: 352  VR---RTVQSHSPSCSIGLPSEAGNSL-LSPSTTKQTGRRTNAAGKKEEEKLKNSDRRNQ 519
            V+    TV            SEAG +L L+ ST        N    ++ EK K S     
Sbjct: 526  VKTIGATVYLAKAESHATETSEAGETLPLNNSTPHPEAVMKNGESSRDAEKDKYSYLERH 585

Query: 520  HGSERISVKKGEKIERK-QVG--KSGSEMIK 603
              SE  +V K ++ E K ++G  ++ S+M++
Sbjct: 586  RASENGTVLKDQRAEGKPKIGNRRNSSQMVR 616


>emb|CBI26910.3| unnamed protein product [Vitis vinifera]
          Length = 593

 Score =  120 bits (302), Expect = 3e-25
 Identities = 83/234 (35%), Positives = 114/234 (48%), Gaps = 30/234 (12%)
 Frame = +1

Query: 1   VFSLRSDDRAEKRKEFYMKLEEKLHAKEAALNQIQAKTQEEAEAHIKQFRRSLNFKAKPM 180
           VF+ RSD+RAE+RKEF+MKLE+K+HAKEA +NQIQAKTQE+ EA I+QFRRSLNFKA PM
Sbjct: 376 VFNFRSDERAERRKEFFMKLEKKMHAKEAEMNQIQAKTQEKTEAEIRQFRRSLNFKATPM 435

Query: 181 PSFYHGALSPQILETRKAVDSRAXXXXXXXXXXXXXXXXXXXFLAQGNHQSLSANKPVRR 360
           PSFYH ++SP                                  A   + ++S NK  +R
Sbjct: 436 PSFYHDSVSP----------------------------------APDGNNAVSINKSTKR 461

Query: 361 TVQSHSPS--CSIGLP-------------SEAGNSLLSPSTTK--------------QTG 453
            ++S S     + G P             SE+ N+   P  TK              Q G
Sbjct: 462 QIKSSSAGGRAAAGFPLYPNTGIDQVVSASESVNTTNPPQVTKAIIRTPSANRNRPHQAG 521

Query: 454 RRTNAAGKKEEEKLKNSDRRNQHGSERISVKKGEKIERKQVGKSGSEMI-KTMK 612
            +   A KKE+EK  N  +       +++  + E       G+S + ++ K MK
Sbjct: 522 VKNELAMKKEQEKDANGQKHRVSEVSKVTKGRVEGKHNAGAGRSSTGIVRKNMK 575


>ref|XP_002312434.1| predicted protein [Populus trichocarpa] gi|222852254|gb|EEE89801.1|
           predicted protein [Populus trichocarpa]
          Length = 178

 Score =  113 bits (283), Expect = 5e-23
 Identities = 54/69 (78%), Positives = 61/69 (88%)
 Frame = +1

Query: 4   FSLRSDDRAEKRKEFYMKLEEKLHAKEAALNQIQAKTQEEAEAHIKQFRRSLNFKAKPMP 183
           FS +SD+RAE+RKEFYMKLEEK HAKEA +NQIQAKTQE+ EA IKQFR+SLNFKA PMP
Sbjct: 99  FSFKSDERAERRKEFYMKLEEKWHAKEAEMNQIQAKTQEKTEAEIKQFRKSLNFKATPMP 158

Query: 184 SFYHGALSP 210
           SFYH A+ P
Sbjct: 159 SFYHVAVPP 167


>ref|XP_002314812.1| predicted protein [Populus trichocarpa] gi|222863852|gb|EEF00983.1|
           predicted protein [Populus trichocarpa]
          Length = 197

 Score =  108 bits (271), Expect = 1e-21
 Identities = 52/69 (75%), Positives = 60/69 (86%)
 Frame = +1

Query: 4   FSLRSDDRAEKRKEFYMKLEEKLHAKEAALNQIQAKTQEEAEAHIKQFRRSLNFKAKPMP 183
           FS +SD+RAE+RKEFYMKLEEKLHAKEA +NQIQAKTQE+ +A IK+FR  LNFKA PMP
Sbjct: 123 FSFKSDERAERRKEFYMKLEEKLHAKEAEMNQIQAKTQEQKKAEIKKFRERLNFKAAPMP 182

Query: 184 SFYHGALSP 210
           SFY  A+SP
Sbjct: 183 SFYRVAVSP 191


>gb|AAD55508.1|AC008148_18 Hypothetical protein [Arabidopsis thaliana]
           gi|46518435|gb|AAS99699.1| At1g70950 [Arabidopsis
           thaliana]
          Length = 417

 Score =  100 bits (249), Expect = 5e-19
 Identities = 47/69 (68%), Positives = 56/69 (81%)
 Frame = +1

Query: 4   FSLRSDDRAEKRKEFYMKLEEKLHAKEAALNQIQAKTQEEAEAHIKQFRRSLNFKAKPMP 183
           F  +  +RAEKRKEFYMKLEEK+HAK+   NQ+QAKTQ++AEA IKQFR+SLNFKA PMP
Sbjct: 267 FRFKCSERAEKRKEFYMKLEEKIHAKKTETNQVQAKTQQKAEAEIKQFRKSLNFKATPMP 326

Query: 184 SFYHGALSP 210
           SFY+    P
Sbjct: 327 SFYNIGTRP 335


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