BLASTX nr result

ID: Coptis24_contig00029086 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029086
         (488 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28829.3| unnamed protein product [Vitis vinifera]              182   2e-44
ref|XP_002269976.2| PREDICTED: cellulose synthase-like protein H...   181   4e-44
emb|CBI28832.3| unnamed protein product [Vitis vinifera]              181   7e-44
emb|CAN72832.1| hypothetical protein VITISV_017982 [Vitis vinifera]   181   7e-44
ref|XP_002269831.2| PREDICTED: cellulose synthase-like protein H...   180   9e-44

>emb|CBI28829.3| unnamed protein product [Vitis vinifera]
          Length = 765

 Score =  182 bits (462), Expect = 2e-44
 Identities = 84/159 (52%), Positives = 110/159 (69%)
 Frame = +3

Query: 12  YLLHGVAGIQGPNYTGTGCFHRRKSIYGLSPDDVELGKNVNLDVAAKLDEETLRARFGYS 191
           Y++ G+AG+QGPNY+GTGCFHRRK IYGL PD         ++   ++DE  L   FG S
Sbjct: 368 YVVSGIAGLQGPNYSGTGCFHRRKVIYGLWPDG-------RMEFKGRIDER-LEKTFGNS 419

Query: 192 MELTKSATQLIYEETAKSDFPDDLLGTLEASTEVANCSYEFNTQWGTKVGWVYGSATEDI 371
            E TK+A +++   +  SD P DL   +EA+ ++A+CSYE+ T WGTK+GW+YG+ TEDI
Sbjct: 420 KEFTKTAARILSGLSGISDCPYDLSNRVEAAHQIASCSYEYGTNWGTKIGWLYGTTTEDI 479

Query: 372 LTGQRIHAMGWSTVYCTPDPVPFLGCAPSAGPVIMVQQK 488
           LTG RIHA GW +  C PDP  FLGCAPS GP  ++QQK
Sbjct: 480 LTGMRIHARGWKSTDCRPDPPAFLGCAPSGGPAALIQQK 518


>ref|XP_002269976.2| PREDICTED: cellulose synthase-like protein H1-like [Vitis vinifera]
          Length = 757

 Score =  181 bits (460), Expect = 4e-44
 Identities = 84/161 (52%), Positives = 111/161 (68%), Gaps = 2/161 (1%)
 Frame = +3

Query: 12  YLLHGVAGIQGPNYTGTGCFHRRKSIYGLSPDD-VELGKNVNLD-VAAKLDEETLRARFG 185
           Y++ G+AG+QGPNY+GTGCFHRRK IYGL PD  +E    + +  +     +E L   FG
Sbjct: 350 YVVSGIAGLQGPNYSGTGCFHRRKVIYGLWPDGRMEFKGRIGMQSIYLSYVDERLEKTFG 409

Query: 186 YSMELTKSATQLIYEETAKSDFPDDLLGTLEASTEVANCSYEFNTQWGTKVGWVYGSATE 365
            S E TK+A +++   +  SD P DL   +EA+ ++A+CSYE+ T WGTK+GW+YG+ TE
Sbjct: 410 NSKEFTKTAARILSGLSGISDCPYDLSNRVEAAHQIASCSYEYGTNWGTKIGWLYGTTTE 469

Query: 366 DILTGQRIHAMGWSTVYCTPDPVPFLGCAPSAGPVIMVQQK 488
           DILTG RIHA GW +  C PDP  FLGCAPS GP  ++QQK
Sbjct: 470 DILTGMRIHARGWKSTDCRPDPPAFLGCAPSGGPAALIQQK 510


>emb|CBI28832.3| unnamed protein product [Vitis vinifera]
          Length = 751

 Score =  181 bits (458), Expect = 7e-44
 Identities = 84/159 (52%), Positives = 108/159 (67%)
 Frame = +3

Query: 12  YLLHGVAGIQGPNYTGTGCFHRRKSIYGLSPDDVELGKNVNLDVAAKLDEETLRARFGYS 191
           Y+  G+AG+QGP+Y+GTGCFHRRK IYGL PD    G+        KL +E L   FG S
Sbjct: 350 YVASGIAGLQGPHYSGTGCFHRRKVIYGLWPD----GRMEFKGRIGKLTDERLEKTFGNS 405

Query: 192 MELTKSATQLIYEETAKSDFPDDLLGTLEASTEVANCSYEFNTQWGTKVGWVYGSATEDI 371
            E TK+A +++   +  SD P DL   +EA+ ++A+CSYE+   WGTK+GW+YG+ TEDI
Sbjct: 406 KEFTKTAARILSGLSGVSDCPYDLSNRVEAAHQIASCSYEYGANWGTKIGWLYGTTTEDI 465

Query: 372 LTGQRIHAMGWSTVYCTPDPVPFLGCAPSAGPVIMVQQK 488
           LTG RIHA GW +  C PDP  FLGCAPS GP  ++QQK
Sbjct: 466 LTGMRIHARGWKSTDCRPDPPAFLGCAPSGGPAALIQQK 504


>emb|CAN72832.1| hypothetical protein VITISV_017982 [Vitis vinifera]
          Length = 1332

 Score =  181 bits (458), Expect = 7e-44
 Identities = 84/159 (52%), Positives = 108/159 (67%)
 Frame = +3

Query: 12   YLLHGVAGIQGPNYTGTGCFHRRKSIYGLSPDDVELGKNVNLDVAAKLDEETLRARFGYS 191
            Y+  G+AG+QGP+Y+GTGCFHRRK IYGL PD    G+        KL +E L   FG S
Sbjct: 931  YVASGIAGLQGPHYSGTGCFHRRKVIYGLWPD----GRMEFKGRIGKLTDERLEKTFGNS 986

Query: 192  MELTKSATQLIYEETAKSDFPDDLLGTLEASTEVANCSYEFNTQWGTKVGWVYGSATEDI 371
             E TK+A +++   +  SD P DL   +EA+ ++A+CSYE+   WGTK+GW+YG+ TEDI
Sbjct: 987  KEFTKTAARILSGLSGVSDCPYDLSNRVEAAHQIASCSYEYGANWGTKIGWLYGTTTEDI 1046

Query: 372  LTGQRIHAMGWSTVYCTPDPVPFLGCAPSAGPVIMVQQK 488
            LTG RIHA GW +  C PDP  FLGCAPS GP  ++QQK
Sbjct: 1047 LTGMRIHARGWKSTDCRPDPPAFLGCAPSGGPAALIQQK 1085


>ref|XP_002269831.2| PREDICTED: cellulose synthase-like protein H1-like [Vitis vinifera]
           gi|297739173|emb|CBI28824.3| unnamed protein product
           [Vitis vinifera]
          Length = 751

 Score =  180 bits (457), Expect = 9e-44
 Identities = 86/159 (54%), Positives = 107/159 (67%)
 Frame = +3

Query: 12  YLLHGVAGIQGPNYTGTGCFHRRKSIYGLSPDDVELGKNVNLDVAAKLDEETLRARFGYS 191
           YL  G+AG+QGP Y+GTGCFHRRK IYGL PD    G+      + KL +E ++  FG S
Sbjct: 350 YLGSGIAGLQGPTYSGTGCFHRRKVIYGLWPD----GRMEIKGRSGKLTDERIQKTFGNS 405

Query: 192 MELTKSATQLIYEETAKSDFPDDLLGTLEASTEVANCSYEFNTQWGTKVGWVYGSATEDI 371
            E T +A +L+   +  S  P DLL  +EA+ EVA CSYE+ T WGTK+GW+YG+ TED+
Sbjct: 406 KEFTTTAARLLSGLSGISHCPYDLLNRVEAAQEVATCSYEYGTSWGTKIGWLYGTTTEDV 465

Query: 372 LTGQRIHAMGWSTVYCTPDPVPFLGCAPSAGPVIMVQQK 488
           LTG RIHA GW +  C PDP  FLGCAPS GP  + QQK
Sbjct: 466 LTGMRIHARGWKSTDCRPDPPAFLGCAPSGGPAALTQQK 504


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