BLASTX nr result
ID: Coptis24_contig00029074
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00029074
(458 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN71765.1| hypothetical protein VITISV_026917 [Vitis vinifera] 85 1e-17
ref|XP_002269324.1| PREDICTED: uncharacterized protein LOC100265... 85 1e-17
ref|XP_002523138.1| conserved hypothetical protein [Ricinus comm... 79 1e-16
emb|CBI36907.3| unnamed protein product [Vitis vinifera] 83 1e-16
ref|XP_003523666.1| PREDICTED: uncharacterized protein LOC100813... 78 1e-16
>emb|CAN71765.1| hypothetical protein VITISV_026917 [Vitis vinifera]
Length = 975
Score = 84.7 bits (208), Expect(2) = 1e-17
Identities = 40/66 (60%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Frame = -1
Query: 455 RTIWTPSMDQFFIALVVDQVRQGDMIDNAL-RKQVWVHMTALFNRKFGYQYEKDVLKNRC 279
RTIWTP MD++FI L+++QV +G+ ID+ L K+ W MTALFN KF +QYEKDVLKNR
Sbjct: 455 RTIWTPEMDRYFIDLMLEQVNKGNRIDDHLFSKRAWKQMTALFNAKFNFQYEKDVLKNRH 514
Query: 278 KSLREI 261
K+LR +
Sbjct: 515 KTLRNL 520
Score = 29.6 bits (65), Expect(2) = 1e-17
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -2
Query: 247 QEGFHWDGVRQMLVAKDDVW 188
Q GF WD RQM+ A ++VW
Sbjct: 530 QRGFSWDEQRQMVTADNNVW 549
Score = 82.8 bits (203), Expect(2) = 1e-16
Identities = 35/63 (55%), Positives = 48/63 (76%)
Frame = -1
Query: 455 RTIWTPSMDQFFIALVVDQVRQGDMIDNALRKQVWVHMTALFNRKFGYQYEKDVLKNRCK 276
RT W P MD++FI L++DQV++G+ +D RKQ W+ M A FN KFG++Y+ DVLKNR K
Sbjct: 688 RTYWQPPMDRYFIDLMLDQVQKGNQVDGVFRKQAWMEMIASFNAKFGFKYDMDVLKNRFK 747
Query: 275 SLR 267
+LR
Sbjct: 748 TLR 750
Score = 28.5 bits (62), Expect(2) = 1e-16
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -2
Query: 241 GFHWDGVRQMLVAKDDVW 188
GF WD RQM+ A D VW
Sbjct: 764 GFIWDDTRQMVTADDCVW 781
>ref|XP_002269324.1| PREDICTED: uncharacterized protein LOC100265757 [Vitis vinifera]
Length = 533
Score = 84.7 bits (208), Expect(2) = 1e-17
Identities = 40/66 (60%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Frame = -1
Query: 455 RTIWTPSMDQFFIALVVDQVRQGDMIDNAL-RKQVWVHMTALFNRKFGYQYEKDVLKNRC 279
RTIWTP MD++FI L+++QV +G+ ID+ L K+ W MTALFN KF +QYEKDVLKNR
Sbjct: 13 RTIWTPEMDRYFIDLMLEQVNKGNRIDDHLFSKRAWKQMTALFNAKFNFQYEKDVLKNRH 72
Query: 278 KSLREI 261
K+LR +
Sbjct: 73 KTLRNL 78
Score = 29.6 bits (65), Expect(2) = 1e-17
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -2
Query: 247 QEGFHWDGVRQMLVAKDDVW 188
Q GF WD RQM+ A ++VW
Sbjct: 88 QRGFSWDEQRQMVTADNNVW 107
Score = 82.8 bits (203), Expect(2) = 1e-16
Identities = 35/63 (55%), Positives = 48/63 (76%)
Frame = -1
Query: 455 RTIWTPSMDQFFIALVVDQVRQGDMIDNALRKQVWVHMTALFNRKFGYQYEKDVLKNRCK 276
RT W P MD++FI L++DQV++G+ +D RKQ W+ M A FN KFG++Y+ DVLKNR K
Sbjct: 246 RTYWQPPMDRYFIDLMLDQVQKGNQVDGVFRKQAWMEMIASFNAKFGFKYDMDVLKNRFK 305
Query: 275 SLR 267
+LR
Sbjct: 306 TLR 308
Score = 28.5 bits (62), Expect(2) = 1e-16
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -2
Query: 241 GFHWDGVRQMLVAKDDVW 188
GF WD RQM+ A D VW
Sbjct: 322 GFIWDDTRQMVTADDCVW 339
>ref|XP_002523138.1| conserved hypothetical protein [Ricinus communis]
gi|223537700|gb|EEF39323.1| conserved hypothetical
protein [Ricinus communis]
Length = 466
Score = 79.3 bits (194), Expect(2) = 1e-16
Identities = 36/66 (54%), Positives = 51/66 (77%), Gaps = 1/66 (1%)
Frame = -1
Query: 455 RTIWTPSMDQFFIALVVDQVRQGDMIDNAL-RKQVWVHMTALFNRKFGYQYEKDVLKNRC 279
RT+WTP MD++FI L+++QV +G+ D+ L K+ W +MT LFN KF ++YEKDVLKNR
Sbjct: 13 RTVWTPEMDRYFIGLLLEQVSKGNKFDDHLFSKRAWKNMTLLFNTKFKFRYEKDVLKNRH 72
Query: 278 KSLREI 261
K+LR +
Sbjct: 73 KTLRNL 78
Score = 32.0 bits (71), Expect(2) = 1e-16
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -2
Query: 247 QEGFHWDGVRQMLVAKDDVW 188
Q GF WD RQM+ A +DVW
Sbjct: 88 QNGFSWDNNRQMVTADNDVW 107
Score = 77.4 bits (189), Expect(2) = 2e-15
Identities = 33/63 (52%), Positives = 45/63 (71%)
Frame = -1
Query: 455 RTIWTPSMDQFFIALVVDQVRQGDMIDNALRKQVWVHMTALFNRKFGYQYEKDVLKNRCK 276
RT W P MD++FI L+++ +R+G+ ID RKQ W+ M FN KFG+ Y+ DVLKNR K
Sbjct: 173 RTYWQPPMDRYFIDLMLEHMRKGNQIDGVFRKQAWMDMITSFNAKFGFNYDVDVLKNRYK 232
Query: 275 SLR 267
+LR
Sbjct: 233 TLR 235
Score = 29.3 bits (64), Expect(2) = 2e-15
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -2
Query: 241 GFHWDGVRQMLVAKDDVW 188
GF WD RQM+ A D VW
Sbjct: 249 GFSWDDTRQMVTADDYVW 266
>emb|CBI36907.3| unnamed protein product [Vitis vinifera]
Length = 407
Score = 82.8 bits (203), Expect(2) = 1e-16
Identities = 35/63 (55%), Positives = 48/63 (76%)
Frame = -1
Query: 455 RTIWTPSMDQFFIALVVDQVRQGDMIDNALRKQVWVHMTALFNRKFGYQYEKDVLKNRCK 276
RT W P MD++FI L++DQV++G+ +D RKQ W+ M A FN KFG++Y+ DVLKNR K
Sbjct: 152 RTYWQPPMDRYFIDLMLDQVQKGNQVDGVFRKQAWMEMIASFNAKFGFKYDMDVLKNRFK 211
Query: 275 SLR 267
+LR
Sbjct: 212 TLR 214
Score = 28.5 bits (62), Expect(2) = 1e-16
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -2
Query: 241 GFHWDGVRQMLVAKDDVW 188
GF WD RQM+ A D VW
Sbjct: 228 GFIWDDTRQMVTADDCVW 245
Score = 70.5 bits (171), Expect(2) = 2e-13
Identities = 34/59 (57%), Positives = 46/59 (77%), Gaps = 1/59 (1%)
Frame = -1
Query: 434 MDQFFIALVVDQVRQGDMIDNAL-RKQVWVHMTALFNRKFGYQYEKDVLKNRCKSLREI 261
MD++FI L+++QV +G+ ID+ L K+ W MTALFN KF +QYEKDVLKNR K+LR +
Sbjct: 1 MDRYFIDLMLEQVNKGNRIDDHLFSKRAWKQMTALFNAKFNFQYEKDVLKNRHKTLRNL 59
Score = 29.6 bits (65), Expect(2) = 2e-13
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -2
Query: 247 QEGFHWDGVRQMLVAKDDVW 188
Q GF WD RQM+ A ++VW
Sbjct: 69 QRGFSWDEQRQMVTADNNVW 88
>ref|XP_003523666.1| PREDICTED: uncharacterized protein LOC100813264 [Glycine max]
Length = 862
Score = 78.2 bits (191), Expect(2) = 1e-16
Identities = 39/78 (50%), Positives = 51/78 (65%), Gaps = 4/78 (5%)
Frame = -1
Query: 455 RTIWTPSMDQFFIALVVDQVRQGDMIDNALRKQVWVHMTALFNRKFGYQYEKDVLKNRCK 276
+T WT SMDQFFI L++DQ+ +G+ +DN K W M ALFN KFG Q+ + VLKNR K
Sbjct: 173 KTDWTASMDQFFIELLLDQLGRGNQVDNGFNKNAWTDMLALFNAKFGCQHGRRVLKNRFK 232
Query: 275 SL----REITAILTGGVS 234
L R+IT ++ G S
Sbjct: 233 KLLKYYRDITNLIKQGFS 250
Score = 32.7 bits (73), Expect(2) = 1e-16
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = -2
Query: 247 QEGFHWDGVRQMLVAKDDVW 188
++GF WD +QML+A DDVW
Sbjct: 246 KQGFSWDEQQQMLLADDDVW 265
Score = 63.5 bits (153), Expect(2) = 2e-11
Identities = 29/64 (45%), Positives = 39/64 (60%)
Frame = -1
Query: 455 RTIWTPSMDQFFIALVVDQVRQGDMIDNALRKQVWVHMTALFNRKFGYQYEKDVLKNRCK 276
RT WTP MD+ I L+++QV+ G+ + Q W M FN +F QY+KDVLKNR K
Sbjct: 335 RTYWTPPMDRCLIDLLLEQVKHGNRLGQTFIAQAWNDMITTFNERFKSQYDKDVLKNRYK 394
Query: 275 SLRE 264
R+
Sbjct: 395 HFRK 398
Score = 30.0 bits (66), Expect(2) = 2e-11
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -2
Query: 247 QEGFHWDGVRQMLVAKDDVW 188
Q GF WD R+M+ A+D VW
Sbjct: 409 QGGFSWDDTREMIDAEDHVW 428
Score = 62.8 bits (151), Expect(2) = 3e-11
Identities = 26/62 (41%), Positives = 41/62 (66%)
Frame = -1
Query: 455 RTIWTPSMDQFFIALVVDQVRQGDMIDNALRKQVWVHMTALFNRKFGYQYEKDVLKNRCK 276
RT WTP ++++FI L+++ +++G+ + + KQ W M FN FG QY+KDVLK R
Sbjct: 17 RTHWTPLLERYFIDLMLEHLQRGNRVGHTFNKQAWTDMLTSFNDNFGSQYDKDVLKTRYT 76
Query: 275 SL 270
+L
Sbjct: 77 NL 78
Score = 30.0 bits (66), Expect(2) = 3e-11
Identities = 14/23 (60%), Positives = 15/23 (65%), Gaps = 2/23 (8%)
Frame = -2
Query: 250 SQEGFHWDGVRQMLVAKDD--VW 188
S GF WD RQM+VA DD VW
Sbjct: 90 SHFGFSWDAARQMVVAADDDSVW 112
Score = 53.1 bits (126), Expect(2) = 1e-06
Identities = 20/55 (36%), Positives = 36/55 (65%)
Frame = -1
Query: 446 WTPSMDQFFIALVVDQVRQGDMIDNALRKQVWVHMTALFNRKFGYQYEKDVLKNR 282
WT SM+ + + L+++QV +G+ I + +Q W+HM FN ++G Q +K VL ++
Sbjct: 503 WTESMEHYIVDLMIEQVNRGNRIGHLFNEQAWMHMVQAFNARWGLQSDKQVLMDQ 557
Score = 24.3 bits (51), Expect(2) = 1e-06
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -2
Query: 250 SQEGFHWDGVRQMLVAKDDVW 188
S F W+ Q L A+DDVW
Sbjct: 573 SHSEFTWNETLQTLNAEDDVW 593