BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029071
         (506 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004158532.1| PREDICTED: pentatricopeptide repeat-containi...   184   5e-45
emb|CBI21323.3| unnamed protein product [Vitis vinifera]              184   9e-45
ref|XP_002274670.1| PREDICTED: pentatricopeptide repeat-containi...   184   9e-45
ref|XP_003549091.1| PREDICTED: pentatricopeptide repeat-containi...   177   8e-43
ref|XP_004138797.1| PREDICTED: pentatricopeptide repeat-containi...   172   3e-41

>ref|XP_004158532.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g14080-like [Cucumis sativus]
          Length = 640

 Score =  184 bits (468), Expect = 5e-45
 Identities = 86/168 (51%), Positives = 121/168 (72%)
 Frame = +2

Query: 2   EMFANGCCGNLKTYNILIRKLSKMGEVEEARCLFNHMLENGLAPDIVTYTSLIKGLCQEA 181
           EMFA GCCGNLKTY+ILI+K SK  ++EEA  L++HML   + PDI  YTSL++GLCQ++
Sbjct: 458 EMFAGGCCGNLKTYSILIQKFSKSNQIEEALVLYSHMLGKNVEPDIAIYTSLLQGLCQDS 517

Query: 182 KVGAACEIFKMSVEQDITLAQLILTALVHSLCKEGNSLAASRLIRGLPPDIIDHECHVVL 361
           ++ AA E+F  SVEQD+ LA  +L+  +  LCK G+ LAAS+L+RGL  D+   + HV L
Sbjct: 518 QLEAAFEVFSKSVEQDVNLAATLLSTFILCLCKVGHFLAASKLLRGLASDVAHPDSHVTL 577

Query: 362 LKGLSDSGDTGMALEHIQWVGDNSPSILKAVSAELVTSLSSSLKPGPV 505
           LKG +D+G+  +A +H++WV + SPS+L  +S EL+  L SS K  P+
Sbjct: 578 LKGFADAGEVSLAKQHVEWVQETSPSMLSVISTELLAFLPSSPKADPI 625


>emb|CBI21323.3| unnamed protein product [Vitis vinifera]
          Length = 676

 Score =  184 bits (466), Expect = 9e-45
 Identities = 91/168 (54%), Positives = 121/168 (72%)
 Frame = +2

Query: 2   EMFANGCCGNLKTYNILIRKLSKMGEVEEARCLFNHMLENGLAPDIVTYTSLIKGLCQEA 181
           EMFA+G   NLKTYNILI+K S++G+++EA+ LF HMLE G+ PD  TYTSL++GLCQE 
Sbjct: 458 EMFASGYGVNLKTYNILIQKFSEIGQIQEAQWLFQHMLEKGVNPDATTYTSLLEGLCQEK 517

Query: 182 KVGAACEIFKMSVEQDITLAQLILTALVHSLCKEGNSLAASRLIRGLPPDIIDHECHVVL 361
           K  +A E+FK SVEQD+ LAQ IL   +  +CKEGN L AS+L+ GL  D+   + HV+ 
Sbjct: 518 KFESAFEVFKKSVEQDVMLAQTILNTFILYICKEGNFLFASKLLCGLTYDVGHSDSHVIF 577

Query: 362 LKGLSDSGDTGMALEHIQWVGDNSPSILKAVSAELVTSLSSSLKPGPV 505
           LK L+D+ +   A+EHI+WVGD  PS+L  +S EL   L+SS KP P+
Sbjct: 578 LKYLADASEISTAIEHIKWVGDTLPSMLPTISTELFALLASSSKPEPI 625


>ref|XP_002274670.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14080
           [Vitis vinifera]
          Length = 660

 Score =  184 bits (466), Expect = 9e-45
 Identities = 91/168 (54%), Positives = 121/168 (72%)
 Frame = +2

Query: 2   EMFANGCCGNLKTYNILIRKLSKMGEVEEARCLFNHMLENGLAPDIVTYTSLIKGLCQEA 181
           EMFA+G   NLKTYNILI+K S++G+++EA+ LF HMLE G+ PD  TYTSL++GLCQE 
Sbjct: 458 EMFASGYGVNLKTYNILIQKFSEIGQIQEAQWLFQHMLEKGVNPDATTYTSLLEGLCQEK 517

Query: 182 KVGAACEIFKMSVEQDITLAQLILTALVHSLCKEGNSLAASRLIRGLPPDIIDHECHVVL 361
           K  +A E+FK SVEQD+ LAQ IL   +  +CKEGN L AS+L+ GL  D+   + HV+ 
Sbjct: 518 KFESAFEVFKKSVEQDVMLAQTILNTFILYICKEGNFLFASKLLCGLTYDVGHSDSHVIF 577

Query: 362 LKGLSDSGDTGMALEHIQWVGDNSPSILKAVSAELVTSLSSSLKPGPV 505
           LK L+D+ +   A+EHI+WVGD  PS+L  +S EL   L+SS KP P+
Sbjct: 578 LKYLADASEISTAIEHIKWVGDTLPSMLPTISTELFALLASSSKPEPI 625


>ref|XP_003549091.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g14080-like [Glycine max]
          Length = 647

 Score =  177 bits (449), Expect = 8e-43
 Identities = 85/168 (50%), Positives = 127/168 (75%)
 Frame = +2

Query: 2   EMFANGCCGNLKTYNILIRKLSKMGEVEEARCLFNHMLENGLAPDIVTYTSLIKGLCQEA 181
           EMF++GCCGNLKTYNILI+K S++G+ EEA  LF HML+ G+ PD+ +YT L++GLCQE 
Sbjct: 454 EMFSSGCCGNLKTYNILIQKFSEVGQAEEAHMLFYHMLDKGVEPDVTSYTLLLEGLCQED 513

Query: 182 KVGAACEIFKMSVEQDITLAQLILTALVHSLCKEGNSLAASRLIRGLPPDIIDHECHVVL 361
           K+ AA E++  SV+QDI LA+ IL++ + SLC++G+ +AAS+L+  L  DI   E HV+L
Sbjct: 514 KLEAAFELYNKSVKQDIILARDILSSFISSLCRKGHLMAASKLLCSLNHDIGCAESHVIL 573

Query: 362 LKGLSDSGDTGMALEHIQWVGDNSPSILKAVSAELVTSLSSSLKPGPV 505
           L+ L+++ +  +A+EH++WV + SPSIL+ +   L+ SLSS+  P P+
Sbjct: 574 LESLANAQEIPIAIEHLKWVQEKSPSILQDICTGLLASLSSATCPEPI 621


>ref|XP_004138797.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g14080-like [Cucumis sativus]
          Length = 635

 Score =  172 bits (436), Expect = 3e-41
 Identities = 84/168 (50%), Positives = 119/168 (70%)
 Frame = +2

Query: 2   EMFANGCCGNLKTYNILIRKLSKMGEVEEARCLFNHMLENGLAPDIVTYTSLIKGLCQEA 181
           EMFA GCCGNLKTY+ILI+K SK  ++EEA  L++HML   + PDI  YTSL++GLCQ++
Sbjct: 458 EMFAGGCCGNLKTYSILIQKFSKSNQIEEALVLYSHMLGKNVEPDIAIYTSLLQGLCQDS 517

Query: 182 KVGAACEIFKMSVEQDITLAQLILTALVHSLCKEGNSLAASRLIRGLPPDIIDHECHVVL 361
           ++ AA E+F  SVEQD+ LA  +L+  +  LC   + LAAS+L+RGL  D+   + HV L
Sbjct: 518 QLEAAFEVFSKSVEQDVNLAATLLSTFI--LC---HFLAASKLLRGLASDVAHPDSHVTL 572

Query: 362 LKGLSDSGDTGMALEHIQWVGDNSPSILKAVSAELVTSLSSSLKPGPV 505
           LKG +D+G+  +A +H++WV + SPS+L  +S EL+  L SS K  P+
Sbjct: 573 LKGFADAGEVSLAKQHVEWVQETSPSMLSVISTELLAFLPSSPKADPI 620