BLASTX nr result

ID: Coptis24_contig00029054 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029054
         (765 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269956.1| PREDICTED: uncharacterized protein LOC100259...   246   5e-63
ref|NP_001238147.1| uncharacterized protein LOC100306649 [Glycin...   228   1e-57
ref|XP_003517185.1| PREDICTED: uncharacterized protein LOC100778...   223   3e-56
ref|XP_002310298.1| predicted protein [Populus trichocarpa] gi|2...   222   8e-56
ref|XP_004146513.1| PREDICTED: uncharacterized protein LOC101208...   218   9e-55

>ref|XP_002269956.1| PREDICTED: uncharacterized protein LOC100259183 [Vitis vinifera]
           gi|297735033|emb|CBI17395.3| unnamed protein product
           [Vitis vinifera]
          Length = 211

 Score =  246 bits (627), Expect = 5e-63
 Identities = 129/172 (75%), Positives = 144/172 (83%)
 Frame = -3

Query: 517 PEAVGHHDVITTVNERRTEGVDPLLEHFNSLKITTPILTSSPTEGTLTDILXXXXXXXXX 338
           P+ VG  D ITTV+ER +E VDPLLE   SLKI TPILTS PTE +LTDIL         
Sbjct: 11  PQRVG--DEITTVSER-SEDVDPLLECLKSLKIATPILTSLPTESSLTDILVRKPSSSSV 67

Query: 337 PGTLNPKVLLELFSMYRDWQEDKAKKISQRQEEVENKIEVADALAVKLLQRFNYSVSAMR 158
            GTLNPKVLLELFSMYRDWQE+K +KIS+ QEE+ENKIEVADALA+KL QRFN+SVSAM+
Sbjct: 68  SGTLNPKVLLELFSMYRDWQEEKTQKISKEQEEIENKIEVADALAIKLHQRFNFSVSAMK 127

Query: 157 TTAHHLSEVQPLQVEVGELKGRLTEVISNCDALCKRIALEGPESLRSSVKPF 2
           TT+HHLSEV  LQVE+GELKGRLTEVISNCDALCKRIA EGPESLR+S+KPF
Sbjct: 128 TTSHHLSEVHALQVEIGELKGRLTEVISNCDALCKRIAAEGPESLRASIKPF 179


>ref|NP_001238147.1| uncharacterized protein LOC100306649 [Glycine max]
           gi|255629179|gb|ACU14934.1| unknown [Glycine max]
          Length = 208

 Score =  228 bits (580), Expect = 1e-57
 Identities = 116/165 (70%), Positives = 132/165 (80%)
 Frame = -3

Query: 496 DVITTVNERRTEGVDPLLEHFNSLKITTPILTSSPTEGTLTDILXXXXXXXXXPGTLNPK 317
           D ITT+ ER +E  DP+LE   SLKIT PILTS PTEGTLTDIL           T+NPK
Sbjct: 16  DKITTITER-SEASDPILERLKSLKITPPILTSPPTEGTLTDILVRKPSSSSVSATVNPK 74

Query: 316 VLLELFSMYRDWQEDKAKKISQRQEEVENKIEVADALAVKLLQRFNYSVSAMRTTAHHLS 137
           V+LELFSMY DWQE KA++IS+RQEE+ENKIEVADALA+KLLQR+N+S S M+T + HLS
Sbjct: 75  VILELFSMYHDWQEKKAQEISKRQEEIENKIEVADALAIKLLQRYNHSTSTMKTASQHLS 134

Query: 136 EVQPLQVEVGELKGRLTEVISNCDALCKRIALEGPESLRSSVKPF 2
            V  LQVE+GELKGRLTE ISNCDALC RIA EGPESLRSS+KPF
Sbjct: 135 GVHALQVEIGELKGRLTEAISNCDALCNRIASEGPESLRSSIKPF 179


>ref|XP_003517185.1| PREDICTED: uncharacterized protein LOC100778225 [Glycine max]
          Length = 228

 Score =  223 bits (568), Expect = 3e-56
 Identities = 115/165 (69%), Positives = 131/165 (79%)
 Frame = -3

Query: 496 DVITTVNERRTEGVDPLLEHFNSLKITTPILTSSPTEGTLTDILXXXXXXXXXPGTLNPK 317
           D ITT+ ER +E  DP+LE    LKIT PILTS PTEGTLTDIL           T+NPK
Sbjct: 36  DKITTITER-SEASDPILERLKYLKITPPILTSPPTEGTLTDILVRKPSSSSVSATVNPK 94

Query: 316 VLLELFSMYRDWQEDKAKKISQRQEEVENKIEVADALAVKLLQRFNYSVSAMRTTAHHLS 137
           V+LELFS+Y DWQE KA++IS RQEE+ENKIEVADALA+KLLQR+N+S S M+T + HLS
Sbjct: 95  VILELFSIYHDWQEKKAQEISIRQEEIENKIEVADALAIKLLQRYNHSTSTMKTASQHLS 154

Query: 136 EVQPLQVEVGELKGRLTEVISNCDALCKRIALEGPESLRSSVKPF 2
            V  LQVE+GELKGRLTEVISNCDALCKRIA EGPESL SS+KPF
Sbjct: 155 GVHSLQVEIGELKGRLTEVISNCDALCKRIATEGPESLVSSIKPF 199


>ref|XP_002310298.1| predicted protein [Populus trichocarpa] gi|222853201|gb|EEE90748.1|
           predicted protein [Populus trichocarpa]
          Length = 209

 Score =  222 bits (565), Expect = 8e-56
 Identities = 116/166 (69%), Positives = 134/166 (80%), Gaps = 1/166 (0%)
 Frame = -3

Query: 496 DVITTVNERRTEGVDPLLEHFNSLKITTPILTSSPTE-GTLTDILXXXXXXXXXPGTLNP 320
           D ITTV ER +E +DP+LE   SLKIT PILTS+P E G+L DIL           T+NP
Sbjct: 16  DEITTVTER-SEALDPILEKLKSLKITRPILTSTPKEEGSLNDILVRKASSSSALATVNP 74

Query: 319 KVLLELFSMYRDWQEDKAKKISQRQEEVENKIEVADALAVKLLQRFNYSVSAMRTTAHHL 140
            VLLEL S+YRDWQ+ K ++IS +QEE+ENKIEVADALA+KLLQR NYSVSAM+T++ HL
Sbjct: 75  NVLLELISIYRDWQDGKVQQISMKQEEIENKIEVADALAIKLLQRLNYSVSAMKTSSQHL 134

Query: 139 SEVQPLQVEVGELKGRLTEVISNCDALCKRIALEGPESLRSSVKPF 2
           SEV  LQVE+GELKGRLTEV+SNCDALCKRIA EGPESLRSSVKPF
Sbjct: 135 SEVHSLQVEIGELKGRLTEVMSNCDALCKRIATEGPESLRSSVKPF 180


>ref|XP_004146513.1| PREDICTED: uncharacterized protein LOC101208248 isoform 1 [Cucumis
           sativus] gi|449499959|ref|XP_004160965.1| PREDICTED:
           uncharacterized LOC101208248 isoform 1 [Cucumis sativus]
          Length = 213

 Score =  218 bits (556), Expect = 9e-55
 Identities = 111/165 (67%), Positives = 136/165 (82%)
 Frame = -3

Query: 496 DVITTVNERRTEGVDPLLEHFNSLKITTPILTSSPTEGTLTDILXXXXXXXXXPGTLNPK 317
           DVI+TV+ER +E VDP+LE   SL+ITTPIL S PTEG+LTDIL           T+NP+
Sbjct: 18  DVISTVSER-SEAVDPILETLKSLQITTPILQSPPTEGSLTDILVRKPPSSSNAVTVNPQ 76

Query: 316 VLLELFSMYRDWQEDKAKKISQRQEEVENKIEVADALAVKLLQRFNYSVSAMRTTAHHLS 137
           VLLELFS+YR WQ+ K ++I++ QE++ENKIEV DALAVKLLQR N+SVSA+++ + HLS
Sbjct: 77  VLLELFSIYRKWQDGKVQEINKNQEDIENKIEVTDALAVKLLQRLNFSVSAVKSASQHLS 136

Query: 136 EVQPLQVEVGELKGRLTEVISNCDALCKRIALEGPESLRSSVKPF 2
           EV  L+VE+GELKGRLTEVISNCDALC+RIA EGPESLRSS+KPF
Sbjct: 137 EVHSLEVEIGELKGRLTEVISNCDALCRRIASEGPESLRSSIKPF 181


Top