BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029053
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270622.1| PREDICTED: condensin complex subunit 2-like ...   163   1e-38
emb|CBI28838.3| unnamed protein product [Vitis vinifera]              162   2e-38
ref|XP_002321137.1| condensin complex components subunit [Populu...   162   3e-38
ref|XP_004151942.1| PREDICTED: LOW QUALITY PROTEIN: condensin co...   153   2e-35
ref|XP_003527505.1| PREDICTED: LOW QUALITY PROTEIN: condensin co...   145   4e-33

>ref|XP_002270622.1| PREDICTED: condensin complex subunit 2-like [Vitis vinifera]
          Length = 674

 Score =  163 bits (413), Expect = 1e-38
 Identities = 82/122 (67%), Positives = 94/122 (77%), Gaps = 5/122 (4%)
 Frame = +3

Query: 12  DYGTMPSWDEENAFSGQFDDGNVYSDAEDSIPLVSQPRQVNRIEVRYDKTSKQVDVHALK 191
           D+G  PSWD+EN F   FD+GN +SD EDS  LVSQPRQVN+IEV+YDKTSKQVDV ALK
Sbjct: 523 DFGVSPSWDDENGFDDAFDNGNFHSDLEDSSTLVSQPRQVNKIEVQYDKTSKQVDVQALK 582

Query: 192 GTLWNHMQK----AANVPELGNDEEVSFKHVLASFPNDC-GAAAREDISPHLCFICLLHL 356
            TLW HMQK    +  V E  ++E VSF+H+LASFP+    AAA EDISPHLCFICLLHL
Sbjct: 583 ETLWGHMQKSTQSSVKVSEYLDEEAVSFRHILASFPDHSRAAAAMEDISPHLCFICLLHL 642

Query: 357 AN 362
           AN
Sbjct: 643 AN 644


>emb|CBI28838.3| unnamed protein product [Vitis vinifera]
          Length = 669

 Score =  162 bits (411), Expect = 2e-38
 Identities = 80/118 (67%), Positives = 93/118 (78%), Gaps = 1/118 (0%)
 Frame = +3

Query: 12  DYGTMPSWDEENAFSGQFDDGNVYSDAEDSIPLVSQPRQVNRIEVRYDKTSKQVDVHALK 191
           D+G  PSWD+EN F   FD+GN +SD EDS  LVSQPRQVN+IEV+YDKTSKQVDV ALK
Sbjct: 523 DFGVSPSWDDENGFDDAFDNGNFHSDLEDSSTLVSQPRQVNKIEVQYDKTSKQVDVQALK 582

Query: 192 GTLWNHMQKAANVPELGNDEEVSFKHVLASFPNDC-GAAAREDISPHLCFICLLHLAN 362
            TLW HMQK+     + ++E VSF+H+LASFP+    AAA EDISPHLCFICLLHLAN
Sbjct: 583 ETLWGHMQKSTQ-SSVKDEEAVSFRHILASFPDHSRAAAAMEDISPHLCFICLLHLAN 639


>ref|XP_002321137.1| condensin complex components subunit [Populus trichocarpa]
           gi|222861910|gb|EEE99452.1| condensin complex components
           subunit [Populus trichocarpa]
          Length = 605

 Score =  162 bits (409), Expect = 3e-38
 Identities = 77/118 (65%), Positives = 94/118 (79%), Gaps = 1/118 (0%)
 Frame = +3

Query: 12  DYGTMPSWDEENAFSGQFDDGNVYSDAEDSIPLVSQPRQVNRIEVRYDKTSKQVDVHALK 191
           D G +PSWD E+AF+GQFDDG+ YSD ED   LV+QPRQVN+IEV YDK SKQVDV  LK
Sbjct: 467 DCGPLPSWDGESAFAGQFDDGDAYSDVEDPNTLVTQPRQVNKIEVHYDKASKQVDVQTLK 526

Query: 192 GTLWNHMQKAANVPELGNDEEVSFKHVLASFPNDCGAAAR-EDISPHLCFICLLHLAN 362
            TLW+H+Q++  +P    +E VSF+ +LASFP+DC AAA  ++ISPHLCFICLLHLAN
Sbjct: 527 ETLWHHIQESPQMPVQDQEEAVSFRDLLASFPSDCRAAATIKEISPHLCFICLLHLAN 584


>ref|XP_004151942.1| PREDICTED: LOW QUALITY PROTEIN: condensin complex subunit 2-like
           [Cucumis sativus] gi|449490353|ref|XP_004158580.1|
           PREDICTED: LOW QUALITY PROTEIN: condensin complex
           subunit 2-like [Cucumis sativus]
          Length = 667

 Score =  153 bits (386), Expect = 2e-35
 Identities = 75/123 (60%), Positives = 92/123 (74%), Gaps = 6/123 (4%)
 Frame = +3

Query: 12  DYGTMPSWDEENAFSGQFDDGNVYSDAEDSIPLVSQPRQVNRIEVRYDKTSKQVDVHALK 191
           DYGTMPSW+++N F GQFD+G+  SD ED   LV+QPRQVN++EV+YDK SKQVDV ALK
Sbjct: 522 DYGTMPSWEDDNDFGGQFDEGDGQSDVEDPDALVTQPRQVNKVEVQYDKKSKQVDVQALK 581

Query: 192 GTLWNHMQKAANVPELGND-----EEVSFKHVLASFPNDCGAAAR-EDISPHLCFICLLH 353
            TLW+H+Q++    E+        E  SFK +LA+FP+DC AA    DISPHLCFICLLH
Sbjct: 582 ETLWSHLQESQTDTEVSXHAQLLYEMASFKQILATFPDDCRAAQTINDISPHLCFICLLH 641

Query: 354 LAN 362
           LAN
Sbjct: 642 LAN 644


>ref|XP_003527505.1| PREDICTED: LOW QUALITY PROTEIN: condensin complex subunit 2-like
           [Glycine max]
          Length = 680

 Score =  145 bits (365), Expect = 4e-33
 Identities = 70/120 (58%), Positives = 92/120 (76%), Gaps = 3/120 (2%)
 Frame = +3

Query: 12  DYGTMPSWDEENAFSGQFDD--GNVYSDAEDSIPLVSQPRQVNRIEVRYDKTSKQVDVHA 185
           +Y + PSWD  +       D  G+++SD EDS  L++QPRQVN+IEV+YDKTSKQVDVHA
Sbjct: 531 EYESFPSWDNGSVCGDDAGDYGGDLHSDMEDSNTLITQPRQVNKIEVQYDKTSKQVDVHA 590

Query: 186 LKGTLWNHMQKAANVPELGNDEEVSFKHVLASFPNDCGAAAR-EDISPHLCFICLLHLAN 362
           LK TLW+H+Q++  +P  G  + +SFK++LA+FP++C AAA   DISPHLCFICLLHLAN
Sbjct: 591 LKITLWDHVQESVKLPLEGQKDTLSFKNILANFPSECNAAATISDISPHLCFICLLHLAN 650