BLASTX nr result

ID: Coptis24_contig00029052 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00029052
         (1221 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526048.1| protein with unknown function [Ricinus commu...   269   1e-69
ref|XP_002312839.1| predicted protein [Populus trichocarpa] gi|1...   261   3e-67
ref|XP_004145694.1| PREDICTED: ras-related protein RABB1b-like [...   260   4e-67
ref|XP_002270701.1| PREDICTED: ras-related protein RABB1b [Vitis...   258   2e-66
ref|XP_003553299.1| PREDICTED: ras-related protein RABB1b-like [...   257   4e-66

>ref|XP_002526048.1| protein with unknown function [Ricinus communis]
           gi|223534629|gb|EEF36325.1| protein with unknown
           function [Ricinus communis]
          Length = 211

 Score =  269 bits (687), Expect = 1e-69
 Identities = 129/156 (82%), Positives = 144/156 (92%)
 Frame = -2

Query: 488 RAHILNTAGQEAFRSITRSYYRGAAGALLVYDITRRQTFNHLANWLEDARQHANPNMAIT 309
           +  I +TAGQE+FRSITRSYYRGAAGALLVYDITRR+TFNHLA+WLEDARQHANPNM I 
Sbjct: 56  KLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIM 115

Query: 308 LIGNKCDLSHRRAVTREEGEQFAKENGLIFMEASARTSQNVNEAFTRTAERILQNIHEGL 129
           LIGNKCDL+HRRAV++EEGEQFAKENGL+F+EASART+QNV EAF RTA +ILQNI EG+
Sbjct: 116 LIGNKCDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIRTAGKILQNIQEGV 175

Query: 128 LDISNESSGIKVGHGRAQGPSGSRDGAVTQRGGCCS 21
            D+SNESSGIKVG+GR QGPSGSRDGAV QRGGCCS
Sbjct: 176 FDVSNESSGIKVGYGRPQGPSGSRDGAVAQRGGCCS 211


>ref|XP_002312839.1| predicted protein [Populus trichocarpa] gi|118481778|gb|ABK92828.1|
           unknown [Populus trichocarpa]
           gi|222849247|gb|EEE86794.1| predicted protein [Populus
           trichocarpa]
          Length = 211

 Score =  261 bits (666), Expect = 3e-67
 Identities = 125/156 (80%), Positives = 142/156 (91%)
 Frame = -2

Query: 488 RAHILNTAGQEAFRSITRSYYRGAAGALLVYDITRRQTFNHLANWLEDARQHANPNMAIT 309
           +  I +TAGQE+FRSITRSYYRGAAGALLVYDITRR+TFNHLA+WLEDARQHANPNM+I 
Sbjct: 56  KLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIM 115

Query: 308 LIGNKCDLSHRRAVTREEGEQFAKENGLIFMEASARTSQNVNEAFTRTAERILQNIHEGL 129
           LIGNKCDL+HRRAV++EEGEQFAKENGL+F+EASART+QNV EAF  TA +ILQNI EG+
Sbjct: 116 LIGNKCDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIGTAGKILQNIQEGV 175

Query: 128 LDISNESSGIKVGHGRAQGPSGSRDGAVTQRGGCCS 21
            D+SNESSGIKVG+GR QG SG+RDG V QRGGCCS
Sbjct: 176 FDVSNESSGIKVGYGRPQGASGARDGTVAQRGGCCS 211


>ref|XP_004145694.1| PREDICTED: ras-related protein RABB1b-like [Cucumis sativus]
           gi|449492910|ref|XP_004159138.1| PREDICTED: ras-related
           protein RABB1b-like [Cucumis sativus]
          Length = 211

 Score =  260 bits (665), Expect = 4e-67
 Identities = 123/155 (79%), Positives = 142/155 (91%)
 Frame = -2

Query: 488 RAHILNTAGQEAFRSITRSYYRGAAGALLVYDITRRQTFNHLANWLEDARQHANPNMAIT 309
           +  I +TAGQE+FRSITRSYYRGAAGALLVYDITRR+TFNHLA+WLEDARQHANPNM+I 
Sbjct: 56  KLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIM 115

Query: 308 LIGNKCDLSHRRAVTREEGEQFAKENGLIFMEASARTSQNVNEAFTRTAERILQNIHEGL 129
           L+GNK DL+HRRAV++EEGEQFAKENGL+F+EASART+QNV EAF +TA +ILQNI EG+
Sbjct: 116 LVGNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGV 175

Query: 128 LDISNESSGIKVGHGRAQGPSGSRDGAVTQRGGCC 24
            D+SNESSGIKVG+GR QGPSG+RDG V QRGGCC
Sbjct: 176 FDVSNESSGIKVGYGRPQGPSGARDGTVAQRGGCC 210


>ref|XP_002270701.1| PREDICTED: ras-related protein RABB1b [Vitis vinifera]
           gi|296087576|emb|CBI34832.3| unnamed protein product
           [Vitis vinifera]
          Length = 209

 Score =  258 bits (659), Expect = 2e-66
 Identities = 125/156 (80%), Positives = 142/156 (91%)
 Frame = -2

Query: 488 RAHILNTAGQEAFRSITRSYYRGAAGALLVYDITRRQTFNHLANWLEDARQHANPNMAIT 309
           +  I +TAGQE+FRSITRSYYRGAAGALLVYDITRR+TFNHLA+WLEDARQHANPNM I 
Sbjct: 56  KLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIM 115

Query: 308 LIGNKCDLSHRRAVTREEGEQFAKENGLIFMEASARTSQNVNEAFTRTAERILQNIHEGL 129
           LIGNKCDL+HRRAV++EEGEQFAKENGL+F+EASART+QNV EAF +TA RILQNI EG+
Sbjct: 116 LIGNKCDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAARILQNIQEGV 175

Query: 128 LDISNESSGIKVGHGRAQGPSGSRDGAVTQRGGCCS 21
            D+SNESSGIKVG+GR QGPSG  DG V+QRGGCC+
Sbjct: 176 FDLSNESSGIKVGYGRPQGPSG--DGTVSQRGGCCN 209


>ref|XP_003553299.1| PREDICTED: ras-related protein RABB1b-like [Glycine max]
          Length = 211

 Score =  257 bits (657), Expect = 4e-66
 Identities = 124/156 (79%), Positives = 139/156 (89%)
 Frame = -2

Query: 488 RAHILNTAGQEAFRSITRSYYRGAAGALLVYDITRRQTFNHLANWLEDARQHANPNMAIT 309
           +  I +TAGQE+FRSITRSYYRGAAGALLVYDITRR TFNHLA+WLEDARQHANPNM I 
Sbjct: 56  KLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLASWLEDARQHANPNMTIM 115

Query: 308 LIGNKCDLSHRRAVTREEGEQFAKENGLIFMEASARTSQNVNEAFTRTAERILQNIHEGL 129
           LIGNKCDLSHRRAV++EEGEQFAKENGL+F+EASART+QNV EAF RTA +ILQNI EG+
Sbjct: 116 LIGNKCDLSHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIRTAGKILQNIQEGV 175

Query: 128 LDISNESSGIKVGHGRAQGPSGSRDGAVTQRGGCCS 21
            D+SNES GIKVG+GR QG  G+RDG V+ RGGCCS
Sbjct: 176 FDVSNESFGIKVGYGRPQGQPGARDGTVSARGGCCS 211


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